Last updated on 2025-11-27 01:48:37 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.46 | 252.28 | 264.74 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 11.31 | 216.92 | 228.23 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 45.00 | 285.94 | 330.94 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 39.00 | 322.78 | 361.78 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 25.00 | 189.00 | 214.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.60 | 241.19 | 256.79 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.21 | 251.43 | 266.64 | OK | |
| r-release-macos-arm64 | 1.1.4 | OK | ||||
| r-release-macos-x86_64 | 1.1.4 | 24.00 | 293.00 | 317.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 21.00 | 186.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.4 | 20.00 | 288.00 | 308.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 237.00 | 261.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [94s/217s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 2.065, system: 0.171, elapsed: 4.129 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.319, system: 0.504, elapsed: 26.493 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.215, system: 0.032, elapsed: 0.394 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.515, system: 0.426, elapsed: 12.720 seconds]
Computing values for grid cells...
... done. [user: 0.182, system: 0.007, elapsed: 0.332 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.935, system: 1.352, elapsed: 45.823 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.608, system: 0.045, elapsed: 2.808 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.881, system: 0.222, elapsed: 24.069 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.024, elapsed: 0.930 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.337, system: 0.301, elapsed: 16.179 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.004, elapsed: 0.505 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.851, system: 0.814, elapsed: 46.953 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.816, system: 0.085, elapsed: 6.916 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.860, system: 0.197, elapsed: 24.468 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.209, system: 0.022, elapsed: 0.492 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.268, system: 0.318, elapsed: 9.865 seconds]
Computing values for grid cells...
... done. [user: 0.183, system: 0.010, elapsed: 0.382 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.380, system: 0.380, elapsed: 3.042 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.442, system: 1.127, elapsed: 47.576 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.955, system: 0.136, elapsed: 5.616 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.095, system: 0.352, elapsed: 20.371 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.024, elapsed: 0.477 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.196, system: 0.299, elapsed: 11.351 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.008, elapsed: 0.356 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.746, system: 0.955, elapsed: 24.608 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 29.148, system: 1.954, elapsed: 64.892 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [91s/213s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.785, system: 0.076, elapsed: 3.691 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.186, system: 0.334, elapsed: 22.847 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.027, elapsed: 0.628 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.149, system: 0.291, elapsed: 9.925 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.008, elapsed: 0.281 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.118, system: 0.859, elapsed: 39.102 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.714, system: 0.056, elapsed: 2.950 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.949, system: 0.222, elapsed: 21.230 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.208, system: 0.022, elapsed: 0.421 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.077, system: 0.259, elapsed: 7.932 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.006, elapsed: 0.348 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.754, system: 0.782, elapsed: 34.316 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.735, system: 0.087, elapsed: 3.960 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 10.058, system: 0.226, elapsed: 22.416 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.206, system: 0.025, elapsed: 0.425 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.163, system: 0.368, elapsed: 13.407 seconds]
Computing values for grid cells...
... done. [user: 0.213, system: 0.027, elapsed: 1.005 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.207, system: 0.295, elapsed: 2.613 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 18.337, system: 1.248, elapsed: 46.122 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.762, system: 0.070, elapsed: 5.760 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.950, system: 0.227, elapsed: 35.977 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.205, system: 0.022, elapsed: 0.569 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.008, system: 0.268, elapsed: 8.384 seconds]
Computing values for grid cells...
... done. [user: 0.173, system: 0.005, elapsed: 0.317 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 11.538, system: 0.941, elapsed: 25.560 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 28.359, system: 1.633, elapsed: 78.614 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
Saving _problems/test-MAPI_Varicell-15.R
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
Expected `sd(sf::st_area(grid.var))` to equal 963339.563502512.
Differences:
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64