cooccure: Co-Occurrence Network Construction and Manipulation
Constructs co-occurrence networks from several types of input
data, such as delimited fields, long/bipartite tables, binary
matrices, or wide sequences. Returns tidy edge data frames and
supports optional scaling, splitting into several networks,
thresholding, and subsetting. Provides eight similarity measures,
including Jaccard, cosine, and association strength. Supports export
to several network and file formats. Network construction and
analysis methods follow Saqr, Lopez-Pernas, Conde, and
Hernandez-Garcia (2024, <doi:10.1007/978-3-031-54464-4_15>).
| Version: |
0.1.1 |
| Depends: |
R (≥ 3.5.0) |
| Imports: |
graphics, Matrix, methods, stats, utils |
| Suggests: |
igraph, cograph, Nestimate, tidygraph, testthat (≥ 3.0.0), knitr, rmarkdown, shiny, DT |
| Published: |
2026-04-24 |
| DOI: |
10.32614/CRAN.package.cooccure (may not be active yet) |
| Author: |
Mohammed Saqr [aut, cre, cph],
Sonsoles López-Pernas [aut, cph],
Kamila Misiejuk [aut, cph] |
| Maintainer: |
Mohammed Saqr <saqr at saqr.me> |
| BugReports: |
https://github.com/mohsaqr/cooccure/issues |
| License: |
MIT + file LICENSE |
| URL: |
https://github.com/mohsaqr/cooccure |
| NeedsCompilation: |
no |
| Language: |
en-US |
| Materials: |
README, NEWS |
| CRAN checks: |
cooccure results |
Documentation:
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