Last updated on 2025-09-01 01:48:47 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.1.11 | 3.04 | 35.57 | 38.61 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 2.1.12 | 2.08 | 27.54 | 29.62 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.1.12 | 58.64 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 2.1.12 | 56.99 | OK | |||
| r-devel-windows-x86_64 | 2.1.12 | 8.00 | 79.00 | 87.00 | OK | |
| r-patched-linux-x86_64 | 2.1.11 | 3.03 | 34.41 | 37.44 | ERROR | |
| r-release-linux-x86_64 | 2.1.12 | 2.87 | 33.64 | 36.51 | OK | |
| r-release-macos-arm64 | 2.1.11 | 43.00 | OK | |||
| r-release-macos-x86_64 | 2.1.12 | 59.00 | OK | |||
| r-release-windows-x86_64 | 2.1.11 | 6.00 | 67.00 | 73.00 | OK | |
| r-oldrel-macos-arm64 | 2.1.11 | 47.00 | OK | |||
| r-oldrel-macos-x86_64 | 2.1.12 | 65.00 | OK | |||
| r-oldrel-windows-x86_64 | 2.1.11 | 6.00 | 68.00 | 74.00 | ERROR |
Version: 2.1.11
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/29s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(cthist)
>
> test_check("cthist")
NCT02586649 - 4 of 4
2025-08-28 22:58:44.808259 NCT02586649 processed (4 versions, 100%)
Rows: 1 Columns: 29
-- Column specification --------------------------------------------------------
Delimiter: ","
chr (20): nctid, overall_status, study_start_date_precision, primary_comple...
dbl (3): version_number, total_versions, enrolment
lgl (3): accepts_healthy_volunteers, whystopped, results_posted
date (3): version_date, study_start_date, primary_completion_date
i Use `spec()` to retrieve the full column specification for this data.
i Specify the column types or set `show_col_types = FALSE` to quiet this message.
NCT04338971 - 1 of 4
NCT04338971 - 2 of 4
NCT04338971 - 3 of 4
NCT04338971 - 4 of 4
2025-08-28 22:58:48.791714 NCT04338971 processed (4 versions, 100%)
Rows: 4 Columns: 29
-- Column specification --------------------------------------------------------
Delimiter: ","
chr (20): nctid, overall_status, study_start_date_precision, primary_comple...
dbl (3): version_number, total_versions, enrolment
lgl (3): accepts_healthy_volunteers, whystopped, results_posted
date (3): version_date, study_start_date, primary_completion_date
i Use `spec()` to retrieve the full column specification for this data.
i Specify the column types or set `show_col_types = FALSE` to quiet this message.
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ──
version$criteria (`actual`) not equal to "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" (`expected`).
lines(actual) vs lines(expected)
- "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g."
- "previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>"
+ "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 2.1.11
Check: tests
Result: ERROR
Running ‘testthat.R’ [9s/30s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(cthist)
>
> test_check("cthist")
NCT02586649 - 4 of 4
2025-08-27 10:53:55.657064 NCT02586649 processed (4 versions, 100%)
Rows: 1 Columns: 29
-- Column specification --------------------------------------------------------
Delimiter: ","
chr (20): nctid, overall_status, study_start_date_precision, primary_comple...
dbl (3): version_number, total_versions, enrolment
lgl (3): accepts_healthy_volunteers, whystopped, results_posted
date (3): version_date, study_start_date, primary_completion_date
i Use `spec()` to retrieve the full column specification for this data.
i Specify the column types or set `show_col_types = FALSE` to quiet this message.
NCT04338971 - 1 of 4
NCT04338971 - 2 of 4
NCT04338971 - 3 of 4
NCT04338971 - 4 of 4
2025-08-27 10:54:00.035728 NCT04338971 processed (4 versions, 100%)
Rows: 4 Columns: 29
-- Column specification --------------------------------------------------------
Delimiter: ","
chr (20): nctid, overall_status, study_start_date_precision, primary_comple...
dbl (3): version_number, total_versions, enrolment
lgl (3): accepts_healthy_volunteers, whystopped, results_posted
date (3): version_date, study_start_date, primary_completion_date
i Use `spec()` to retrieve the full column specification for this data.
i Specify the column types or set `show_col_types = FALSE` to quiet this message.
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ──
version$criteria (`actual`) not equal to "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" (`expected`).
lines(actual) vs lines(expected)
- "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g."
- "previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>"
+ "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>"
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 30 ]
Error: Test failures
Execution halted
Flavor: r-patched-linux-x86_64
Version: 2.1.11
Check: tests
Result: ERROR
Running 'testthat.R' [77s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> library(testthat)
> library(cthist)
>
> test_check("cthist")
NCT02586649 - 4 of 4
2025-08-29 15:31:43.129631 NCT02586649 processed (4 versions, 100%)
Rows: 1 Columns: 29
-- Column specification --------------------------------------------------------
Delimiter: ","
chr (20): nctid, overall_status, study_start_date_precision, primary_comple...
dbl (3): version_number, total_versions, enrolment
lgl (3): accepts_healthy_volunteers, whystopped, results_posted
date (3): version_date, study_start_date, primary_completion_date
i Use `spec()` to retrieve the full column specification for this data.
i Specify the column types or set `show_col_types = FALSE` to quiet this message.
NCT04338971 - 1 of 4
NCT04338971 - 2 of 4
Version caused a warning: NCT04338971 version 2
Here's the original warning message:
simpleWarning in open.connection(con, "rb"): URL 'https://clinicaltrials.gov/api/int/studies/NCT04338971/history/2': Timeout of 60 seconds was reached
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 29 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-clinicaltrials_gov_version_criteria.R:9:9'): ClinicalTrials.gov criteria downloads correctly ──
version$criteria (`actual`) not equal to "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>" (`expected`).
lines(actual) vs lines(expected)
- "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g."
- "previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>"
+ "<p>Inclusion Criteria (MCI patients):</p><ul><li>right handedness</li><li><p>amnestic and amnestic plus MCI with:</p><ol><li>subjective memory impairment;</li><li>objective memory difficulties, at least 1 SD below gender, age and education adjusted standard values;</li><li>relatively normal performance in other cognitive domains;</li><li>no constraints in activities of daily livings</li><li>age: 50-90 years</li></ol></li></ul><p>Exclusion Criteria:</p><ul><li>severe internal or psychiatric disease</li><li>epilepsy</li><li>other severe neurological diseases, e.g. previous major stroke or brain tumor</li><li>DMS-IV manifest dementia</li><li>contraindication for MRT (claustrophobia, metallic implants, tattoos)</li></ul>"
── Error ('test-overall_status_lengths.R:2:5'): Overall status lengths parse correctly ──
Error in `versiondata$ostatus`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. ├─cthist::clinicaltrials_gov_download("NCT04338971") at test-overall_status_lengths.R:2:5
2. │ ├─... %>% ...
3. │ └─tibble::tribble(...)
4. │ └─tibble:::extract_frame_data_from_dots(...)
5. │ └─rlang::list2(...)
6. └─readr::write_csv(., file = output_filename, append = TRUE)
7. └─readr::write_delim(...)
8. ├─base::stopifnot(is.data.frame(x))
9. └─base::is.data.frame(x)
[ FAIL 2 | WARN 0 | SKIP 0 | PASS 29 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-windows-x86_64