Last updated on 2025-05-24 01:51:17 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.1 | 2.74 | 42.59 | 45.33 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.2.1 | 1.80 | 33.30 | 35.10 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.1 | 77.19 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.1 | 87.49 | OK | |||
| r-devel-windows-x86_64 | 0.2.1 | 6.00 | 103.00 | 109.00 | OK | |
| r-patched-linux-x86_64 | 0.2.1 | 2.82 | 44.25 | 47.07 | OK | |
| r-release-linux-x86_64 | 0.2.1 | 2.41 | 43.90 | 46.31 | OK | |
| r-release-macos-arm64 | 0.2.1 | 108.00 | OK | |||
| r-release-macos-x86_64 | 0.2.1 | 122.00 | OK | |||
| r-release-windows-x86_64 | 0.2.1 | 5.00 | 100.00 | 105.00 | ERROR | |
| r-oldrel-macos-arm64 | 0.2.1 | 108.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.2.1 | 131.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.2.1 | 5.00 | 107.00 | 112.00 | OK |
Version: 0.2.1
Check: examples
Result: ERROR
Running examples in ‘cvdprevent-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: cvd_indicator_nationalarea_metric_data
> ### Title: Indicator national vs area metric data
> ### Aliases: cvd_indicator_nationalarea_metric_data
>
> ### ** Examples
>
> # Compare performance against metric 150 (AF: treatment with anticoagulants
> # - all people) in 'Chester South PCN' (area ID 553) with national
> # performance:
> cvd_indicator_nationalarea_metric_data(metric_id = 150, time_period_id = 17, area_id = 553) |>
+ dplyr::slice_head(n=5)
Error in `recycle_columns()`:
! Tibble columns must have compatible sizes.
• Size 2: Column `AreaData`.
• Size 3: Column `TargetData`.
ℹ Only values of size one are recycled.
Backtrace:
▆
1. ├─dplyr::slice_head(...)
2. └─cvdprevent::cvd_indicator_nationalarea_metric_data(...)
3. ├─base::tryCatch(...)
4. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
5. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
6. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
7. ├─tidyr::unnest(dplyr::as_tibble(purrr::compact(data)), cols = AreaData)
8. ├─dplyr::as_tibble(purrr::compact(data))
9. └─tibble:::as_tibble.list(purrr::compact(data))
10. └─tibble:::lst_to_tibble(x, .rows, .name_repair, col_lengths(x))
11. └─tibble:::recycle_columns(x, .rows, lengths)
12. └─tibble:::abort_incompatible_size(.rows, names(x), lengths, "Requested with `.rows` argument")
13. └─tibble:::tibble_abort(...)
14. └─rlang::abort(x, class, ..., call = call, parent = parent, use_cli_format = TRUE)
Execution halted
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/13s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(cvdprevent)
>
> test_check("cvdprevent")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-cvd_api_functions.R:168:3'): cvd_indicator_nationalarea_metric_data works ──
Expected `test <- cvd_indicator_nationalarea_metric_data()` to run without any errors.
i Actually got a <tibble_error_incompatible_size> with text:
Tibble columns must have compatible sizes.
* Size 2: Column `AreaData`.
* Size 3: Column `TargetData`.
i Only values of size one are recycled.
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘using_cvdprevent.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/cvdprevent.Rcheck/vign_test/cvdprevent/vignettes/using_cvdprevent_files/figure-html/unnamed-chunk-25-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16676 bytes
Input file size = 16778 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14283
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14283
Output IDAT size = 14283 bytes (2393 bytes decrease)
Output file size = 14361 bytes (2417 bytes = 14.41% decrease)
Quitting from using_cvdprevent.Rmd:425-428 [unnamed-chunk-34]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'using_cvdprevent.Rmd' failed with diagnostics:
Tibble columns must have compatible sizes.
• Size 2: Column `AreaData`.
• Size 3: Column `TargetData`.
ℹ Only values of size one are recycled.
--- failed re-building ‘using_cvdprevent.Rmd’
SUMMARY: processing the following file failed:
‘using_cvdprevent.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/11s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(cvdprevent)
>
> test_check("cvdprevent")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-cvd_api_functions.R:168:3'): cvd_indicator_nationalarea_metric_data works ──
Expected `test <- cvd_indicator_nationalarea_metric_data()` to run without any errors.
i Actually got a <tibble_error_incompatible_size> with text:
Tibble columns must have compatible sizes.
* Size 2: Column `AreaData`.
* Size 3: Column `TargetData`.
i Only values of size one are recycled.
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘using_cvdprevent.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/cvdprevent.Rcheck/vign_test/cvdprevent/vignettes/using_cvdprevent_files/figure-html/unnamed-chunk-25-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 16676 bytes
Input file size = 16778 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14283
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14283
Output IDAT size = 14283 bytes (2393 bytes decrease)
Output file size = 14361 bytes (2417 bytes = 14.41% decrease)
Quitting from using_cvdprevent.Rmd:425-428 [unnamed-chunk-34]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'using_cvdprevent.Rmd' failed with diagnostics:
Tibble columns must have compatible sizes.
• Size 2: Column `AreaData`.
• Size 3: Column `TargetData`.
ℹ Only values of size one are recycled.
--- failed re-building ‘using_cvdprevent.Rmd’
SUMMARY: processing the following file failed:
‘using_cvdprevent.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: examples
Result: ERROR
Running examples in 'cvdprevent-Ex.R' failed
The error most likely occurred in:
> ### Name: cvd_indicator_nationalarea_metric_data
> ### Title: Indicator national vs area metric data
> ### Aliases: cvd_indicator_nationalarea_metric_data
>
> ### ** Examples
>
> # Compare performance against metric 150 (AF: treatment with anticoagulants
> # - all people) in 'Chester South PCN' (area ID 553) with national
> # performance:
> cvd_indicator_nationalarea_metric_data(metric_id = 150, time_period_id = 17, area_id = 553) |>
+ dplyr::slice_head(n=5)
Error in `recycle_columns()`:
! Tibble columns must have compatible sizes.
• Size 2: Column `AreaData`.
• Size 3: Column `TargetData`.
ℹ Only values of size one are recycled.
Backtrace:
▆
1. ├─dplyr::slice_head(...)
2. └─cvdprevent::cvd_indicator_nationalarea_metric_data(...)
3. ├─base::tryCatch(...)
4. │ └─base (local) tryCatchList(expr, classes, parentenv, handlers)
5. │ └─base (local) tryCatchOne(expr, names, parentenv, handlers[[1L]])
6. │ └─base (local) doTryCatch(return(expr), name, parentenv, handler)
7. ├─tidyr::unnest(dplyr::as_tibble(purrr::compact(data)), cols = AreaData)
8. ├─dplyr::as_tibble(purrr::compact(data))
9. └─tibble:::as_tibble.list(purrr::compact(data))
10. └─tibble:::lst_to_tibble(x, .rows, .name_repair, col_lengths(x))
11. └─tibble:::recycle_columns(x, .rows, lengths)
12. └─tibble:::abort_incompatible_size(.rows, names(x), lengths, "Requested with `.rows` argument")
13. └─tibble:::tibble_abort(...)
14. └─rlang::abort(x, class, ..., call = call, parent = parent, use_cli_format = TRUE)
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.2.1
Check: tests
Result: ERROR
Running 'testthat.R' [12s]
Running the tests in 'tests/testthat.R' failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(cvdprevent)
>
> test_check("cvdprevent")
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-cvd_api_functions.R:168:3'): cvd_indicator_nationalarea_metric_data works ──
Expected `test <- cvd_indicator_nationalarea_metric_data()` to run without any errors.
i Actually got a <tibble_error_incompatible_size> with text:
Tibble columns must have compatible sizes.
* Size 2: Column `AreaData`.
* Size 3: Column `TargetData`.
i Only values of size one are recycled.
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 34 ]
Error: Test failures
Execution halted
Flavor: r-release-windows-x86_64
Version: 0.2.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'using_cvdprevent.Rmd' using rmarkdown
Quitting from using_cvdprevent.Rmd:425-428 [unnamed-chunk-34]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
NULL
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'using_cvdprevent.Rmd' failed with diagnostics:
Tibble columns must have compatible sizes.
• Size 2: Column `AreaData`.
• Size 3: Column `TargetData`.
ℹ Only values of size one are recycled.
--- failed re-building 'using_cvdprevent.Rmd'
SUMMARY: processing the following file failed:
'using_cvdprevent.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-windows-x86_64