Last updated on 2025-10-07 01:48:38 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 13.80 | 251.42 | 265.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 8.78 | 235.10 | 243.88 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 330.32 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 352.72 | OK | |||
| r-devel-windows-x86_64 | 1.1.4 | 21.00 | 190.00 | 211.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.26 | 285.36 | 300.62 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 13.03 | 250.02 | 263.05 | OK | |
| r-release-macos-arm64 | 1.1.4 | 102.00 | OK | |||
| r-release-macos-x86_64 | 1.1.4 | 186.00 | ERROR | |||
| r-release-windows-x86_64 | 1.1.4 | 18.00 | 189.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 98.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.4 | 206.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 1.1.4 | 24.00 | 236.00 | 260.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [81s/132s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.678, system: 0.082, elapsed: 2.586 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.274, system: 0.275, elapsed: 20.291 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.194, system: 0.019, elapsed: 0.572 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.759, system: 0.216, elapsed: 7.336 seconds]
Computing values for grid cells...
... done. [user: 0.159, system: 0.002, elapsed: 0.210 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.599, system: 0.626, elapsed: 32.018 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.578, system: 0.073, elapsed: 2.293 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.347, system: 0.341, elapsed: 12.762 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.193, system: 0.017, elapsed: 0.252 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.015, system: 0.296, elapsed: 5.062 seconds]
Computing values for grid cells...
... done. [user: 0.170, system: 0.009, elapsed: 0.217 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.853, system: 0.768, elapsed: 21.307 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.630, system: 0.067, elapsed: 1.855 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.062, system: 0.122, elapsed: 15.192 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.186, system: 0.012, elapsed: 0.377 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.769, system: 0.185, elapsed: 6.651 seconds]
Computing values for grid cells...
... done. [user: 0.158, system: 0.004, elapsed: 0.243 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 3 4
... computing probabilities from permuted values ...
... done. [user: 1.141, system: 0.204, elapsed: 1.206 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.563, system: 0.628, elapsed: 26.524 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.495, system: 0.033, elapsed: 2.469 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.038, system: 0.088, elapsed: 13.898 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.190, system: 0.017, elapsed: 0.313 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.694, system: 0.174, elapsed: 7.734 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.003, elapsed: 0.475 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.255, system: 0.462, elapsed: 18.950 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.470, system: 0.808, elapsed: 45.086 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [78s/140s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.525, system: 0.042, elapsed: 2.791 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.779, system: 0.054, elapsed: 12.826 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.182, system: 0.013, elapsed: 0.282 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.478, system: 0.169, elapsed: 5.767 seconds]
Computing values for grid cells...
... done. [user: 0.162, system: 0.005, elapsed: 0.307 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 14.655, system: 0.300, elapsed: 22.847 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.557, system: 0.039, elapsed: 2.660 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.992, system: 0.096, elapsed: 14.967 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.185, system: 0.011, elapsed: 0.251 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.602, system: 0.178, elapsed: 5.049 seconds]
Computing values for grid cells...
... done. [user: 0.168, system: 0.004, elapsed: 0.214 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.054, system: 0.355, elapsed: 24.085 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.497, system: 0.029, elapsed: 2.445 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.913, system: 0.107, elapsed: 15.606 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.184, system: 0.011, elapsed: 0.349 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.585, system: 0.175, elapsed: 6.449 seconds]
Computing values for grid cells...
... done. [user: 0.178, system: 0.016, elapsed: 0.292 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.057, system: 0.250, elapsed: 0.872 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.045, system: 0.626, elapsed: 27.101 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.486, system: 0.036, elapsed: 2.005 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 8.871, system: 0.092, elapsed: 16.949 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.181, system: 0.014, elapsed: 0.503 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.664, system: 0.204, elapsed: 10.413 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.473 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.090, system: 0.533, elapsed: 25.504 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 25.109, system: 0.909, elapsed: 57.212 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64