CRAN Package Check Results for Package tmt

Last updated on 2025-12-07 02:50:07 CET.

Flavor Version Tinstall Tcheck Ttotal Status Flags
r-devel-linux-x86_64-debian-clang 0.3.6-0 27.79 118.05 145.84 ERROR
r-devel-linux-x86_64-debian-gcc 0.3.6-0 20.10 72.26 92.36 ERROR
r-devel-linux-x86_64-fedora-clang 0.3.6-0 304.00 -43.73 260.27 ERROR
r-devel-linux-x86_64-fedora-gcc 0.3.6-0 35.00 206.00 241.00 ERROR
r-devel-windows-x86_64 0.3.6-0 30.00 133.00 163.00 ERROR
r-patched-linux-x86_64 0.3.6-0 26.15 108.66 134.81 OK
r-release-linux-x86_64 0.3.6-0 28.32 109.13 137.45 OK
r-release-macos-arm64 0.3.6-0 OK
r-release-macos-x86_64 0.3.6-0 16.00 109.00 125.00 OK
r-release-windows-x86_64 0.3.6-0 33.00 134.00 167.00 OK
r-oldrel-macos-arm64 0.3.6-0 OK
r-oldrel-macos-x86_64 0.3.6-4 18.00 150.00 168.00 OK
r-oldrel-windows-x86_64 0.3.6-0 41.00 174.00 215.00 OK

Additional issues

M1mac

Check Details

Version: 0.3.6-0
Check: tests
Result: ERROR Running ‘testthat.R’ [34s/50s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tmt) - tmt 0.3.6-0 (2025-06-20) > > test_check("tmt") Saving _problems/test-helperfunctions-771.R The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 The following items are specified in the dataset, but not in the submitted mstdesign: i1 The following items are specified in the mstdesign, but not in the dataset: ii1 The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-helperfunctions.R:771:5'): test additional functions ─────────── Error in `cbind(thres[1, , drop = FALSE], t(diff(thres)))`: number of rows of matrices must match (see arg 2) Backtrace: ▆ 1. └─tmt:::thresholds_to_probs(thres_row, opts = "", row = TRUE) at test-helperfunctions.R:771:5 2. └─base::cbind(thres[1, , drop = FALSE], t(diff(thres))) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-clang

Version: 0.3.6-0
Check: package dependencies
Result: WARN Cannot process vignettes Packages suggested but not available for checking: 'roxygen2', 'knitr', 'prettydoc', 'rmarkdown' VignetteBuilder package required for checking but not installed: ‘knitr’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.6-0
Check: tests
Result: ERROR Running ‘testthat.R’ [21s/25s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tmt) - tmt 0.3.6-0 (2025-06-20) > > test_check("tmt") Saving _problems/test-helperfunctions-771.R The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 The following items are specified in the dataset, but not in the submitted mstdesign: i1 The following items are specified in the mstdesign, but not in the dataset: ii1 The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-helperfunctions.R:771:5'): test additional functions ─────────── Error in `cbind(thres[1, , drop = FALSE], t(diff(thres)))`: number of rows of matrices must match (see arg 2) Backtrace: ▆ 1. └─tmt:::thresholds_to_probs(thres_row, opts = "", row = TRUE) at test-helperfunctions.R:771:5 2. └─base::cbind(thres[1, , drop = FALSE], t(diff(thres))) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.6-0
Check: package vignettes
Result: NOTE Package has ‘vignettes’ subdirectory but apparently no vignettes. Perhaps the ‘VignetteBuilder’ information is missing from the DESCRIPTION file? Flavor: r-devel-linux-x86_64-debian-gcc

Version: 0.3.6-0
Check: tests
Result: ERROR Running ‘testthat.R’ [60s/238s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tmt) - tmt 0.3.6-0 (2025-06-20) > > test_check("tmt") Saving _problems/test-helperfunctions-771.R The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 The following items are specified in the dataset, but not in the submitted mstdesign: i1 The following items are specified in the mstdesign, but not in the dataset: ii1 The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-helperfunctions.R:771:5'): test additional functions ─────────── Error in `cbind(thres[1, , drop = FALSE], t(diff(thres)))`: number of rows of matrices must match (see arg 2) Backtrace: ▆ 1. └─tmt:::thresholds_to_probs(thres_row, opts = "", row = TRUE) at test-helperfunctions.R:771:5 2. └─base::cbind(thres[1, , drop = FALSE], t(diff(thres))) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-clang

Version: 0.3.6-0
Check: tests
Result: ERROR Running ‘testthat.R’ [53s/61s] Running the tests in ‘tests/testthat.R’ failed. Complete output: > library(testthat) > library(tmt) - tmt 0.3.6-0 (2025-06-20) > > test_check("tmt") Saving _problems/test-helperfunctions-771.R The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 The following items are specified in the dataset, but not in the submitted mstdesign: i1 The following items are specified in the mstdesign, but not in the dataset: ii1 The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-helperfunctions.R:771:5'): test additional functions ─────────── Error in `cbind(thres[1, , drop = FALSE], t(diff(thres)))`: number of rows of matrices must match (see arg 2) Backtrace: ▆ 1. └─tmt:::thresholds_to_probs(thres_row, opts = "", row = TRUE) at test-helperfunctions.R:771:5 2. └─base::cbind(thres[1, , drop = FALSE], t(diff(thres))) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] Error: ! Test failures. Execution halted Flavor: r-devel-linux-x86_64-fedora-gcc

Version: 0.3.6-0
Check: tests
Result: ERROR Running 'testthat.R' [33s] Running the tests in 'tests/testthat.R' failed. Complete output: > library(testthat) > library(tmt) - tmt 0.3.6-0 (2025-06-20) > > test_check("tmt") Saving _problems/test-helperfunctions-771.R The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 The following items are specified in the dataset, but not in the submitted mstdesign: i1 The following items are specified in the mstdesign, but not in the dataset: ii1 The following items are specified in the dataset, but not in the submitted mstdesign: ii1 The following items are specified in the mstdesign, but not in the dataset: i1 [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] ══ Failed tests ════════════════════════════════════════════════════════════════ ── Error ('test-helperfunctions.R:771:5'): test additional functions ─────────── Error in `cbind(thres[1, , drop = FALSE], t(diff(thres)))`: number of rows of matrices must match (see arg 2) Backtrace: ▆ 1. └─tmt:::thresholds_to_probs(thres_row, opts = "", row = TRUE) at test-helperfunctions.R:771:5 2. └─base::cbind(thres[1, , drop = FALSE], t(diff(thres))) [ FAIL 1 | WARN 0 | SKIP 0 | PASS 352 ] Error: ! Test failures. Execution halted Flavor: r-devel-windows-x86_64