To cite inferCSN in publications, please consider citing the following papers:

Li X, Meng X, Chen H, Fu X, Wang P, Chen X, Gu C, Zhou J (2023). “Integration of single sample and population analysis for understanding immune evasion mechanisms of lung cancer.” npj Systems Biology and Applications, 9(1), 4. doi:10.1038/s41540-023-00267-8, https://doi.org/10.1038/s41540-023-00267-8.

Hussein H, Rahul M, Tim N (2023). “L0learn: A scalable package for sparse learning using l0 regularization.” Journal of Machine Learning Research, 24(205), 1-8.

Hussein H, Rahul M, Smibert P, Papalexi E, Satija R (2020). “Fast Best Subset Selection: Coordinate Descent and Local Combinatorial Optimization Algorithms.” Operations Research, 68(5), 1517-1537. doi:10.1287/opre.2019.1919, https://doi.org/10.1287/opre.2019.1919.

Corresponding BibTeX entries:

  @Article{,
    author = {Xiong Li and Xu Meng and Haowen Chen and Xiangzheng Fu
      and Peng Wang and Xia Chen and Changlong Gu and Juan Zhou},
    title = {Integration of single sample and population analysis for
      understanding immune evasion mechanisms of lung cancer},
    journal = {npj Systems Biology and Applications},
    year = {2023},
    volume = {9},
    number = {1},
    pages = {4},
    doi = {10.1038/s41540-023-00267-8},
    url = {https://doi.org/10.1038/s41540-023-00267-8},
  }

  @Article{,
    author = {Hazimeh Hussein and Mazumder Rahul and Nonet Tim},
    title = {L0learn: A scalable package for sparse learning using l0
      regularization},
    journal = {Journal of Machine Learning Research},
    year = {2023},
    volume = {24},
    number = {205},
    pages = {1-8},
  }

  @Article{,
    author = {Hazimeh Hussein and Mazumder Rahul and Peter Smibert and
      Efthymia Papalexi and Rahul Satija},
    title = {Fast Best Subset Selection: Coordinate Descent and Local
      Combinatorial Optimization Algorithms},
    journal = {Operations Research},
    year = {2020},
    volume = {68},
    number = {5},
    pages = {1517-1537},
    doi = {10.1287/opre.2019.1919},
    url = {https://doi.org/10.1287/opre.2019.1919},
  }