scPipeline: A Wrapper for 'Seurat' and Related R Packages for End-to-End
Single Cell Analysis
Reports markers list, differentially expressed genes, associated pathways, cell-type annotations, does batch correction and other related single cell analyses all wrapped within 'Seurat'.
| Version: |
0.2.0.0 |
| Imports: |
Seurat, batchelor, dplyr, ReactomeGSA, celldex, SingleR, SummarizedExperiment, biomaRt, magrittr, rlang |
| Suggests: |
knitr, rmarkdown |
| Published: |
2025-03-07 |
| DOI: |
10.32614/CRAN.package.scPipeline |
| Author: |
Viswanadham Sridhara
 [aut, cre] |
| Maintainer: |
Viswanadham Sridhara <Sridhara.Omics at gmail.com> |
| License: |
MIT + file LICENSE |
| NeedsCompilation: |
no |
| Materials: |
README NEWS |
| CRAN checks: |
scPipeline results |
Documentation:
Downloads:
| Package source: |
scPipeline_0.2.0.0.tar.gz |
| Windows binaries: |
r-devel: not available, r-release: not available, r-oldrel: not available |
| macOS binaries: |
r-devel (arm64): not available, r-release (arm64): not available, r-oldrel (arm64): not available, r-devel (x86_64): not available, r-release (x86_64): not available, r-oldrel (x86_64): not available |
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