# Generated by roxygen2: do not edit by hand

S3method("==",DataSet)
S3method("[",DataSetList)
S3method(AUC,ECDF)
S3method(ECDF,DataSet)
S3method(ECDF,DataSetList)
S3method(Plot.Comparison.Heatmap,DataSetList)
S3method(Plot.FV.Aggregated,DataSetList)
S3method(Plot.FV.ECDF_AUC,DataSetList)
S3method(Plot.FV.ECDF_Per_Target,DataSetList)
S3method(Plot.FV.ECDF_Single_Func,DataSetList)
S3method(Plot.FV.Histogram,DataSetList)
S3method(Plot.FV.Multi_Func,DataSetList)
S3method(Plot.FV.PDF,DataSetList)
S3method(Plot.FV.Parameters,DataSetList)
S3method(Plot.FV.Single_Func,DataSetList)
S3method(Plot.RT.Aggregated,DataSetList)
S3method(Plot.RT.ECDF_AUC,DataSetList)
S3method(Plot.RT.ECDF_Multi_Func,DataSetList)
S3method(Plot.RT.ECDF_Per_Target,DataSetList)
S3method(Plot.RT.ECDF_Single_Func,DataSetList)
S3method(Plot.RT.Histogram,DataSetList)
S3method(Plot.RT.Multi_Func,DataSetList)
S3method(Plot.RT.PMF,DataSetList)
S3method(Plot.RT.Parameters,DataSetList)
S3method(Plot.RT.Single_Func,DataSetList)
S3method(Plot.Stats.Glicko2_Candlestick,DataSetList)
S3method(Plot.Stats.Significance_Graph,DataSetList)
S3method(Plot.Stats.Significance_Heatmap,DataSetList)
S3method(arrange,DataSetList)
S3method(as.character,DataSet)
S3method(c,DataSet)
S3method(c,DataSetList)
S3method(get_ERT,DataSet)
S3method(get_ERT,DataSetList)
S3method(get_FV,DataSet)
S3method(get_FV_overview,DataSet)
S3method(get_FV_overview,DataSetList)
S3method(get_FV_sample,DataSet)
S3method(get_FV_sample,DataSetList)
S3method(get_FV_summary,DataSet)
S3method(get_FV_summary,DataSetList)
S3method(get_PAR_name,DataSet)
S3method(get_PAR_sample,DataSet)
S3method(get_PAR_sample,DataSetList)
S3method(get_PAR_summary,DataSet)
S3method(get_PAR_summary,DataSetList)
S3method(get_RT,DataSet)
S3method(get_RT_overview,DataSet)
S3method(get_RT_overview,DataSetList)
S3method(get_RT_sample,DataSet)
S3method(get_RT_sample,DataSetList)
S3method(get_RT_summary,DataSet)
S3method(get_RT_summary,DataSetList)
S3method(get_id,DataSet)
S3method(get_id,DataSetList)
S3method(get_maxRT,DataSet)
S3method(get_maxRT,DataSetList)
S3method(get_overview,DataSet)
S3method(get_overview,DataSetList)
S3method(max_ERTs,DataSetList)
S3method(mean_FVs,DataSetList)
S3method(pairwise.test,DataSetList)
S3method(pairwise.test,list)
S3method(print,DataSet)
S3method(print,DataSetList)
S3method(subset,DataSet)
S3method(subset,DataSetList)
S3method(summary,DataSet)
S3method(summary,DataSetList)
export(AUC)
export(DataSet)
export(DataSetList)
export(ECDF)
export(IOH_plot_ly_default)
export(Plot.Comparison.Heatmap)
export(Plot.FV.Aggregated)
export(Plot.FV.ECDF_AUC)
export(Plot.FV.ECDF_Per_Target)
export(Plot.FV.ECDF_Single_Func)
export(Plot.FV.Histogram)
export(Plot.FV.Multi_Func)
export(Plot.FV.PDF)
export(Plot.FV.Parameters)
export(Plot.FV.Single_Func)
export(Plot.Performviz)
export(Plot.RT.Aggregated)
export(Plot.RT.ECDF_AUC)
export(Plot.RT.ECDF_Multi_Func)
export(Plot.RT.ECDF_Per_Target)
export(Plot.RT.ECDF_Single_Func)
export(Plot.RT.Histogram)
export(Plot.RT.Multi_Func)
export(Plot.RT.PMF)
export(Plot.RT.Parameters)
export(Plot.RT.Single_Func)
export(Plot.Stats.Glicko2_Candlestick)
export(Plot.Stats.Significance_Graph)
export(Plot.Stats.Significance_Heatmap)
export(Plot.cumulative_difference_plot)
export(SP)
export(arrange)
export(bootstrap_RT)
export(cat.DataSet)
export(change_id)
export(check_dsc_configured)
export(check_format)
export(clean_DataSetList)
export(fast_RT_samples)
export(generate_data.AUC)
export(generate_data.Aggr)
export(generate_data.CDP)
export(generate_data.EAF)
export(generate_data.EAF_Difference)
export(generate_data.EAF_diff_Approximate)
export(generate_data.ECDF)
export(generate_data.ECDF_From_EAF)
export(generate_data.ECDF_raw)
export(generate_data.Heatmaps)
export(generate_data.PMF)
export(generate_data.Parameter_correlation)
export(generate_data.Parameters)
export(generate_data.Single_Function)
export(generate_data.hist)
export(get_ECDF_targets)
export(get_ERT)
export(get_FV)
export(get_FV_overview)
export(get_FV_sample)
export(get_FV_summary)
export(get_PAR_name)
export(get_PAR_sample)
export(get_PAR_summary)
export(get_RT)
export(get_RT_overview)
export(get_RT_sample)
export(get_RT_summary)
export(get_algId)
export(get_color_scheme)
export(get_color_scheme_dt)
export(get_default_ECDF_targets)
export(get_dim)
export(get_dsc_omnibus)
export(get_dsc_posthoc)
export(get_dsc_rank)
export(get_funcId)
export(get_funcName)
export(get_funvals)
export(get_id)
export(get_line_style)
export(get_marg_contrib_ecdf)
export(get_maxRT)
export(get_ontology_data)
export(get_ontology_var)
export(get_overview)
export(get_parId)
export(get_position_dsl)
export(get_runtimes)
export(get_shapley_values)
export(get_static_attribute_values)
export(get_static_attributes)
export(get_target_dt)
export(glicko2_ranking)
export(max_ERTs)
export(mean_FVs)
export(pairwise.test)
export(plot_eaf_data)
export(plot_eaf_differences)
export(plot_general_data)
export(read_IOH_v1plus)
export(read_index_file)
export(read_pure_csv)
export(register_DSC)
export(runServer)
export(save_plotly)
export(save_table)
export(scan_index_file)
export(seq_FV)
export(seq_RT)
export(set_DSC_credentials)
export(set_color_scheme)
importFrom(RColorBrewer,brewer.pal)
importFrom(colorspace,sequential_hcl)
importFrom(data.table,":=")
importFrom(data.table,as.data.table)
importFrom(data.table,copy)
importFrom(data.table,data.table)
importFrom(data.table,frank)
importFrom(data.table,fread)
importFrom(data.table,getDTthreads)
importFrom(data.table,is.data.table)
importFrom(data.table,melt)
importFrom(data.table,rbindlist)
importFrom(data.table,setDT)
importFrom(data.table,setDTthreads)
importFrom(data.table,setnames)
importFrom(data.table,setorder)
importFrom(data.table,setorderv)
importFrom(data.table,transpose)
importFrom(dplyr,"%>%")
importFrom(dplyr,mutate)
importFrom(eaf,eafdiff)
importFrom(eaf,eafs)
importFrom(ggplot2,aes)
importFrom(ggplot2,element_text)
importFrom(ggplot2,facet_wrap)
importFrom(ggplot2,geom_jitter)
importFrom(ggplot2,geom_line)
importFrom(ggplot2,geom_ribbon)
importFrom(ggplot2,geom_violin)
importFrom(ggplot2,ggplot)
importFrom(ggplot2,guides)
importFrom(ggplot2,scale_color_manual)
importFrom(ggplot2,scale_colour_manual)
importFrom(ggplot2,scale_fill_manual)
importFrom(ggplot2,scale_x_continuous)
importFrom(ggplot2,scale_x_log10)
importFrom(ggplot2,theme)
importFrom(ggplot2,theme_grey)
importFrom(ggplot2,theme_set)
importFrom(grDevices,col2rgb)
importFrom(grDevices,colorRampPalette)
importFrom(grDevices,colors)
importFrom(grDevices,nclass.FD)
importFrom(graphics,hist)
importFrom(httr,GET)
importFrom(httr,POST)
importFrom(httr,add_headers)
importFrom(httr,authenticate)
importFrom(httr,content)
importFrom(httr,timeout)
importFrom(knitr,kable)
importFrom(magrittr,"%<>%")
importFrom(magrittr,mod)
importFrom(magrittr,set_colnames)
importFrom(magrittr,set_names)
importFrom(magrittr,set_rownames)
importFrom(methods,hasArg)
importFrom(plotly,add_annotations)
importFrom(plotly,add_contour)
importFrom(plotly,add_polygons)
importFrom(plotly,add_trace)
importFrom(plotly,animation_opts)
importFrom(plotly,colorbar)
importFrom(plotly,hide_colorbar)
importFrom(plotly,layout)
importFrom(plotly,orca)
importFrom(plotly,plot_ly)
importFrom(plotly,rename_)
importFrom(plotly,save_image)
importFrom(plotly,subplot)
importFrom(reshape2,acast)
importFrom(reshape2,dcast)
importFrom(rjson,fromJSON)
importFrom(rlang,is_installed)
importFrom(shiny,req)
importFrom(stats,ave)
importFrom(stats,dt)
importFrom(stats,ecdf)
importFrom(stats,integrate)
importFrom(stats,ks.test)
importFrom(stats,median)
importFrom(stats,p.adjust)
importFrom(stats,quantile)
importFrom(stats,rgeom)
importFrom(stats,sd)
importFrom(stringi,stri_detect_fixed)
importFrom(stringi,stri_detect_regex)
importFrom(stringi,stri_locate_all)
importFrom(stringi,stri_rand_strings)
importFrom(stringi,stri_replace)
importFrom(stringi,stri_replace_all_fixed)
importFrom(stringi,stri_sub)
importFrom(utils,compareVersion)
importFrom(utils,data)
importFrom(utils,head)
importFrom(utils,read.csv)
importFrom(utils,tail)
importFrom(utils,type.convert)
importFrom(utils,write.csv)
importFrom(viridis,viridis)
useDynLib(IOHanalyzer)
