ac2b40c429949134d719ceabed369e2e *DESCRIPTION
d5e06e27eb4a3d4ad84698d5a9275c89 *NAMESPACE
c59a3ab4aa1d6e4ab1c1bd0b4809f801 *NEWS.md
4fdf8d0ffd68bbdf3b09a045378dbc2f *R/RcppExports.R
c25a8deade004c72a0763806885c96ab *R/data.R
54890c289b5055e3720d89d29cfac09f *R/filter_pactr-accessors.R
8374b5738a8b52ec87c41030b0b022a0 *R/filter_pactr-class.R
35d679aeee91e25af90465a726ced0c4 *R/filter_pactr-methods.R
a30da9ad6a5c00644c427673608e9682 *R/filters.R
5d4d5072cd8c9063169d3d6728c1d3d0 *R/import_data.R
b47a35a6b91b3f9d0900dcdb6b291bd9 *R/mpactR-package.R
25a938395c9f79a733795892e4289a2a *R/mpactr-accessors.R
551de2cbe93c11b8ab7fc7fb90a7c21c *R/mpactr-class.R
5de93218e7cd803545f947c4202f207c *R/mpactr-methods.R
0e705c2b77dedaaa8e1f7927a9b75800 *R/pactr-class_cloning.R
92fb3a1b8394c9d64eea9979098e38cf *R/peak_table_formatter.R
2943ba50eb4a77196bb6e001f8a299b9 *R/qc_graph_pactr-class.R
7855117d0e64f589f5e38b2b580d1b5e *R/quality_control.R
c0b8e592a9f7be05785405de5d26d3c0 *R/statistics.R
b8607c6a4cddaa1564f57619b793010f *R/summary-class.R
e827b95864f41ce3f8b4df31470dacea *R/utils.R
362928cc84c48654211e20ceb54d1279 *README.md
295e013ab9bd435f2ae409875526c57d *TODO
533839446f70bde34a1050627ce80586 *build/partial.rdb
70697950544726184ffffc7f84e42eef *build/vignette.rds
797f10fb352a0fcbe1c8ac62fa8ac31c *data/cultures_data.rda
d6bf37717c035b6d38c9854404bec394 *inst/CITATION
8d7cc84c219677be70c4e16d075dde0c *inst/doc/downstream_analyses.R
9557db30f79f8339599cd7ca6f98abb6 *inst/doc/downstream_analyses.Rmd
3aa44469716305ffe8b074adc37da899 *inst/doc/downstream_analyses.html
8589a854555415696f0276ef8411ad81 *inst/doc/mpactr.R
e3e76cdd36d419e5f76d42b5cc5b362d *inst/doc/mpactr.Rmd
f8de39af565386b75b4e7b3e19761eb2 *inst/doc/mpactr.html
8e548aaa7cf57b1fc8c2cc10e3e0baf7 *inst/doc/reference_semantics.R
b9e77628ed027b253f9e53a75e509291 *inst/doc/reference_semantics.Rmd
cb1ef84be90248e3a5f8c8fa58f113af *inst/doc/reference_semantics.html
ffc6c282da3e81ffa7f23f1f75b5df6a *inst/extdata/PTY087I2_dataset.csv
a0ed80f04dd755ce0038e1c905c50080 *inst/extdata/PTY087I2_extractmetadata.csv
06a81c6694691629bb2968381d5e8480 *inst/extdata/PTY087I2_samplelist.csv
fb14a73f121efb47fcbf9b013f82e036 *inst/extdata/coculture_peak_table.csv
6771232bcfa501145eccbb4bc150954c *inst/extdata/cultures_metaboscape_metadata.csv
99f57f1bf6d468d6e9a076013e41ea52 *inst/extdata/cultures_metaboscape_peaktable.csv
f071ca66df30ce6548964fa7d7cbe23b *inst/extdata/cultures_metadata.csv
ff793cdc757fe7b0462d07a33c1a2ada *inst/extdata/cultures_peak_table.csv
556563a15ee470015719857dcbaa9af4 *inst/extdata/ion_masses/DefinedIons.csv
c24262e66b845ec5bba326fca7355c32 *inst/extdata/metadata.csv
50b61fe0972d8235f56366212f52a528 *man/cultures_data.Rd
6a808821b7e851fabc7a437e4b569832 *man/example_path.Rd
251052b9bdbc082366891e849beda9d0 *man/figures/logo.png
a52fdc1e071bda7a7d03b6ae0b771e4b *man/filter_cv.Rd
4da0758bd7639ceca936c3cefbdf4574 *man/filter_group.Rd
f920ca29fa8a4e5668816bee46d5cd82 *man/filter_insource_ions.Rd
54729910774e73d0601cce747a720c84 *man/filter_mispicked_ions.Rd
83bc463c9ecefa750c09579290e962cc *man/filter_summary.Rd
e81e02b81160257646c395b56b1fbf4d *man/get_cv_data.Rd
5b6ce28df0cfbbb0b8af94ca5e721de9 *man/get_group_averages.Rd
a7f665dd596ab9283920aa7f9582cfe1 *man/get_metadata.Rd
e827285ba54bc8c75a4181dda235f2bc *man/get_peak_table.Rd
d62b9fb4c68791e117cb2c1b1ebdf7df *man/get_raw_data.Rd
ce6c3ee8efd22da0971d5094a579c430 *man/get_similar_ions.Rd
748ed3541691ac5b6e8e7c50e10a150e *man/import_data.Rd
c5919118200acaaa0fe01c9ed0c4cf99 *man/limit_cores.Rd
6add74fd3c24fd11c6fb457cc42cf95a *man/mpactr-package.Rd
1ab57333e08b14b712b8eaa08f473f25 *man/plot_qc_tree.Rd
3a527e2afcd3a36b8f4d7b04484cba8c *man/qc_summary.Rd
8d23639fa47777885654defc93854a28 *src/CvFilter.cpp
84bd6fa625d83cc20c1ad1ce4b1e71e2 *src/CvFilter.h
6a1f95de2c6ee983e7851c3bf1f68805 *src/FeatureData.h
03cc4c2d6cade3f02a0420cce4dadbc9 *src/IntensityPeaks.h
68b329da9893e34099c7d8ad5cb9c940 *src/Makevars
c537af6c2d9a4c6104836667b8839f19 *src/Math.h
06d8d78169d96be629c73bceda831148 *src/RcppExports.cpp
57872ec18f1666c3439191d5c0e07245 *src/main.cpp
37a23f1634e4e67f302f09102e5c6db3 *tests/testthat.R
db02ba0798b3a7e0d904ec6c82452f26 *tests/testthat/exttestdata/102623_MonoVCoculture_pt.csv
5d2338c233cff6f492e95acca0c8d41e *tests/testthat/exttestdata/102623_metadata_correct.csv
892fb2fc2ee87dcdf3dccfa3e18c205f *tests/testthat/exttestdata/102623_metadata_simple.csv
db02ba0798b3a7e0d904ec6c82452f26 *tests/testthat/exttestdata/102623_peaktable_MonoVsCoculture_expandedgradient.csv
fb14a73f121efb47fcbf9b013f82e036 *tests/testthat/exttestdata/102623_peaktable_coculture_simple.csv
1397711f53918f499937f723c5277366 *tests/testthat/exttestdata/102623_peaktable_coculture_simple/iondict.csv
60d6234b78be0ed9f43aa44d1c2ddbee *tests/testthat/exttestdata/102623_peaktable_coculture_simple_Uppercase.csv
4a13cc137a87b80c281629139d01fe5b *tests/testthat/exttestdata/102623_peaktable_coculture_simple_groupaverages.csv
a79b246958d6a74c63f616d22d9aa6f1 *tests/testthat/exttestdata/102623_peaktable_coculture_simple_merged.csv
457e209eed85a90f716697f315ce273e *tests/testthat/exttestdata/102623_samplelist.csv
f5985da1dd9afdaad393812323902a72 *tests/testthat/exttestdata/MJB_MonoVSCoculture_metaboscape_ft.csv
f079b6cabc8ee08acba6f65108f7a430 *tests/testthat/exttestdata/cut_ions.csv
2dd9be86dd1f5fa8e011e5bf4785953e *tests/testthat/exttestdata/expected_treemap.RDS
f411bac6b1f4d304edd7bf7ffc0c06e3 *tests/testthat/exttestdata/expected_treemap.png
60a867f225e8bc2115b45468d7e409df *tests/testthat/exttestdata/msdata_blankfilterg.csv
e4e570853c69a4dbbfd0f51dbbdbc063 *tests/testthat/exttestdata/msdata_blankfilterg_abundance.csv
26ba058e34ecb43f44b986223cfc0de7 *tests/testthat/exttestdata/msdata_errprop_mean_full.csv
e82bc79148a3d95774187f0f239ba51c *tests/testthat/exttestdata/output_ANG18_monoculture.csv
645e0e197169e23260cb77e109539535 *tests/testthat/exttestdata/output_ANGDT_monoculture
1d03441a98377827cdb5cd9a15a928a8 *tests/testthat/exttestdata/output_Blanks
306d5de567608639d72379762e3cb18e *tests/testthat/exttestdata/output_Coculture
76500e20f7d9cdd8a473853275fb634f *tests/testthat/exttestdata/output_JC1_monoculture
10b8c0c6b49bdfe8ce4077974642160f *tests/testthat/exttestdata/output_JC28_monoculture
e682265bcd9afe50ea8de1c30fc248d2 *tests/testthat/exttestdata/peak_table_dups.csv
eed00a60f4e7931b63610ec585775b07 *tests/testthat/exttestdata/peak_table_post_formatted.csv
3b3bf610808d272ff422941d904aa238 *tests/testthat/test-data.R
18ab0020ceb59bb14b8c4ce4ec8513a9 *tests/testthat/test-filter_pactr-accessors.R
980d2537897d8b538a6bba507c8c2a00 *tests/testthat/test-filter_pactr-class.R
51560f131fca3fac0a42c735f2610029 *tests/testthat/test-filter_pactr-methods.R
9ade9d0f2a524324481b27a5a51b679e *tests/testthat/test-filters.R
15b6a4f50dabf13f9f63c175c0e550b8 *tests/testthat/test-import_data.R
8fbd2df3bc6e4c2c454d0f804fc7264f *tests/testthat/test-mpactr-accessors.R
4e33e35bd7e04f21e0ccf1e79b517dc2 *tests/testthat/test-mpactr-class.R
abfa46e0efe5f5f2cd87fd46d2f269a7 *tests/testthat/test-mpactr-methods.R
4b99c23f2cbdbd64427fa3c310172041 *tests/testthat/test-pactr-class_cloning.R
7c40c8b86d400cfb96133e0e06e7e93c *tests/testthat/test-peak_table_formatter.R
539ea544db6d506d84dad478470a8e7f *tests/testthat/test-qc_graph_pactr-class.R
93bce290b7e8d5a0e69f2b5da6cdc4bc *tests/testthat/test-quality_control.R
cc33d3803213173237049f5fdcf39d19 *tests/testthat/test-statistics.R
34932cb407d9a29e7c512c9ccafbdddc *tests/testthat/test-summary-class.R
9557db30f79f8339599cd7ca6f98abb6 *vignettes/downstream_analyses.Rmd
e3e76cdd36d419e5f76d42b5cc5b362d *vignettes/mpactr.Rmd
b9e77628ed027b253f9e53a75e509291 *vignettes/reference_semantics.Rmd
