CRAN Package Check Results for Package RMark

Last updated on 2026-08-04 02:51:08 CEST.

Flavor	Version	T_install	T_check	T_total	Status	Flags
r-devel-linux-x86_64-debian-clang	3.1.0	19.28	145.19	164.47	OK	--install=fake --no-examples --no-tests --no-vignettes
r-devel-linux-x86_64-debian-gcc	3.1.0	13.50	102.08	115.58	NOTE	--install=fake --no-examples --no-tests --no-vignettes
r-devel-linux-x86_64-fedora-clang	3.1.0	33.00	220.67	253.67	NOTE
r-devel-linux-x86_64-fedora-gcc	3.1.0	13.00	95.13	108.13	NOTE
r-devel-windows-x86_64	3.1.0	30.00	177.00	207.00	OK
r-patched-linux-x86_64	3.1.0	20.75	132.55	153.30	OK	--install=fake --no-examples --no-tests --no-vignettes
r-release-linux-x86_64	3.1.0	16.48	134.31	150.79	OK	--install=fake --no-examples --no-tests --no-vignettes
r-release-macos-arm64	3.1.0	5.00	32.00	37.00	ERROR
r-release-macos-x86_64	3.1.0	14.00	117.00	131.00	ERROR
r-release-windows-x86_64	3.1.0	25.00	181.00	206.00	OK
r-oldrel-macos-arm64	3.1.0	4.00	36.00	40.00	ERROR
r-oldrel-macos-x86_64	3.1.0	13.00	213.00	226.00	ERROR
r-oldrel-windows-x86_64	3.1.0	31.00	220.00	251.00	OK

Check Details

Version: 3.1.0
Flags: --install=fake --no-examples --no-tests --no-vignettes
Check: for new files in some other directories
Result: NOTE Found the following files/directories: ‘~/tmp/scratch/Rtmp0A9bZN’ ‘~/tmp/scratch/Rtmp0Ddc68’ ‘~/tmp/scratch/Rtmp0EVFah’ ‘~/tmp/scratch/Rtmp17PIZn’ ‘~/tmp/scratch/Rtmp1jEdqf’ ‘~/tmp/scratch/Rtmp1loPpO’ ‘~/tmp/scratch/Rtmp20jpPc’ ‘~/tmp/scratch/Rtmp2sX1t5’ ‘~/tmp/scratch/Rtmp37dW5v’ ‘~/tmp/scratch/Rtmp3sZ0Ez’ ‘~/tmp/scratch/Rtmp4I9S2Y’ ‘~/tmp/scratch/Rtmp4IJmnO’ ‘~/tmp/scratch/Rtmp4Jzd4J’ ‘~/tmp/scratch/Rtmp4MAewr’ ‘~/tmp/scratch/Rtmp4iPqoP’ ‘~/tmp/scratch/Rtmp5AojdI’ ‘~/tmp/scratch/Rtmp64UPHa’ ‘~/tmp/scratch/Rtmp6RtV9Q’ ‘~/tmp/scratch/Rtmp6Vf2WF’ ‘~/tmp/scratch/Rtmp6emomT’ ‘~/tmp/scratch/Rtmp6gI9Cp’ ‘~/tmp/scratch/Rtmp74CUid’ ‘~/tmp/scratch/Rtmp7Rb3RA’ ‘~/tmp/scratch/Rtmp7nAuB5’ ‘~/tmp/scratch/Rtmp7utcr7’ ‘~/tmp/scratch/Rtmp9Tve2L’ ‘~/tmp/scratch/Rtmp9j7dAK’ ‘~/tmp/scratch/Rtmp9k45RJ’ ‘~/tmp/scratch/Rtmp9xS5tF’ ‘~/tmp/scratch/RtmpAAoHoG’ ‘~/tmp/scratch/RtmpBl6k9t’ ‘~/tmp/scratch/RtmpCcgaJ2’ ‘~/tmp/scratch/RtmpDXq1ai’ ‘~/tmp/scratch/RtmpDkdIEy’ ‘~/tmp/scratch/RtmpEjPxxi’ ‘~/tmp/scratch/RtmpEpxakZ’ ‘~/tmp/scratch/RtmpFNNAFb’ ‘~/tmp/scratch/RtmpFO708h’ ‘~/tmp/scratch/RtmpFTOYVw’ ‘~/tmp/scratch/RtmpGL7gXS’ ‘~/tmp/scratch/RtmpGMLZXV’ ‘~/tmp/scratch/RtmpGsy1iH’ ‘~/tmp/scratch/RtmpHHjREP’ ‘~/tmp/scratch/RtmpHoH5P3’ ‘~/tmp/scratch/RtmpI2AxRs’ ‘~/tmp/scratch/RtmpIEmzZO’ ‘~/tmp/scratch/RtmpIhsM7u’ ‘~/tmp/scratch/RtmpIo94fE’ ‘~/tmp/scratch/RtmpJ0QPVh’ ‘~/tmp/scratch/RtmpJ6BffK’ ‘~/tmp/scratch/RtmpJDxMSw’ ‘~/tmp/scratch/RtmpJKlj4r’ ‘~/tmp/scratch/RtmpJLoHgS’ ‘~/tmp/scratch/RtmpJVG7qY’ ‘~/tmp/scratch/RtmpJcz9xZ’ ‘~/tmp/scratch/RtmpK2FyYK’ ‘~/tmp/scratch/RtmpKjROd3’ ‘~/tmp/scratch/RtmpL3sabO’ ‘~/tmp/scratch/RtmpLFeM0W’ ‘~/tmp/scratch/RtmpNz6LiK’ ‘~/tmp/scratch/RtmpOYuLuI’ ‘~/tmp/scratch/RtmpQ4DBgU’ ‘~/tmp/scratch/RtmpQp43bb’ ‘~/tmp/scratch/RtmpRBwq1r’ ‘~/tmp/scratch/RtmpRPHcCm’ ‘~/tmp/scratch/RtmpRSlQC1’ ‘~/tmp/scratch/RtmpSP6OXK’ ‘~/tmp/scratch/RtmpSe967r’ ‘~/tmp/scratch/RtmpTLHMbT’ ‘~/tmp/scratch/RtmpTpD8ps’ ‘~/tmp/scratch/RtmpTt1cNp’ ‘~/tmp/scratch/RtmpU3Icil’ ‘~/tmp/scratch/RtmpUKzSwz’ ‘~/tmp/scratch/RtmpVMdhhJ’ ‘~/tmp/scratch/RtmpVaWvur’ ‘~/tmp/scratch/RtmpW5U8Dw’ ‘~/tmp/scratch/RtmpXeW6vo’ ‘~/tmp/scratch/RtmpXshqtN’ ‘~/tmp/scratch/RtmpY8YrJ0’ ‘~/tmp/scratch/RtmpYDVXZV’ ‘~/tmp/scratch/RtmpZGMVYP’ ‘~/tmp/scratch/RtmpZR3fy0’ ‘~/tmp/scratch/Rtmpa8rEo0’ ‘~/tmp/scratch/RtmpbOUhRu’ ‘~/tmp/scratch/Rtmpbjyysx’ ‘~/tmp/scratch/RtmpcKfs3Z’ ‘~/tmp/scratch/Rtmpd7b2BG’ ‘~/tmp/scratch/RtmpdhEtdt’ ‘~/tmp/scratch/RtmpdxBuuX’ ‘~/tmp/scratch/RtmpdyQAU9’ ‘~/tmp/scratch/RtmpeqUUgH’ ‘~/tmp/scratch/RtmpfNnMFl’ ‘~/tmp/scratch/RtmpfV5L5o’ ‘~/tmp/scratch/Rtmpg4PC7e’ ‘~/tmp/scratch/Rtmph4GNbX’ ‘~/tmp/scratch/RtmphLxkEP’ ‘~/tmp/scratch/RtmphQDEVg’ ‘~/tmp/scratch/RtmphYbq7q’ ‘~/tmp/scratch/RtmphjLI7h’ ‘~/tmp/scratch/RtmpiRc3OO’ ‘~/tmp/scratch/RtmpjsNn2H’ ‘~/tmp/scratch/RtmpjyNAOH’ ‘~/tmp/scratch/RtmpklCoEa’ ‘~/tmp/scratch/Rtmpl73EGy’ ‘~/tmp/scratch/RtmpmNPMe4’ ‘~/tmp/scratch/RtmpmrNPrd’ ‘~/tmp/scratch/Rtmpn9u0iC’ ‘~/tmp/scratch/Rtmpnl4yez’ ‘~/tmp/scratch/RtmpoAF5iI’ ‘~/tmp/scratch/RtmpoonJNV’ ‘~/tmp/scratch/RtmporPEJs’ ‘~/tmp/scratch/RtmpotE14I’ ‘~/tmp/scratch/RtmppUk3RW’ ‘~/tmp/scratch/RtmppZ5hCI’ ‘~/tmp/scratch/RtmpqPM71Z’ ‘~/tmp/scratch/Rtmpr3Yyis’ ‘~/tmp/scratch/RtmprCiSiH’ ‘~/tmp/scratch/RtmpreTFQn’ ‘~/tmp/scratch/RtmprhVOwO’ ‘~/tmp/scratch/RtmprlRMPb’ ‘~/tmp/scratch/RtmpsFJnyh’ ‘~/tmp/scratch/RtmpsQpctF’ ‘~/tmp/scratch/RtmpsVJXjH’ ‘~/tmp/scratch/RtmptSFDCi’ ‘~/tmp/scratch/RtmptxC0Sw’ ‘~/tmp/scratch/RtmptzKFIW’ ‘~/tmp/scratch/Rtmpu1SLBp’ ‘~/tmp/scratch/RtmpvNTpSH’ ‘~/tmp/scratch/RtmpvOFj5m’ ‘~/tmp/scratch/RtmpvtTJ2y’ ‘~/tmp/scratch/RtmpvyWxFc’ ‘~/tmp/scratch/RtmpwQTFrf’ ‘~/tmp/scratch/RtmpwvFYV9’ ‘~/tmp/scratch/RtmpxNEBaa’ ‘~/tmp/scratch/RtmpxPUDjb’ ‘~/tmp/scratch/RtmpyYzH50’ ‘~/tmp/scratch/Rtmpya9yDx’ ‘~/tmp/scratch/Rtmpz1P1Gm’ ‘~/tmp/scratch/xvfb-run.0ImNs5’ ‘~/tmp/scratch/xvfb-run.0hoFTr’ ‘~/tmp/scratch/xvfb-run.1FLpQy’ ‘~/tmp/scratch/xvfb-run.2SVXhp’ ‘~/tmp/scratch/xvfb-run.2mr6aV’ ‘~/tmp/scratch/xvfb-run.2otB7S’ ‘~/tmp/scratch/xvfb-run.3X46cv’ ‘~/tmp/scratch/xvfb-run.52u32k’ ‘~/tmp/scratch/xvfb-run.5UKO2N’ ‘~/tmp/scratch/xvfb-run.6czF9c’ ‘~/tmp/scratch/xvfb-run.8v6GbV’ ‘~/tmp/scratch/xvfb-run.9g4jQx’ ‘~/tmp/scratch/xvfb-run.9vxOe0’ ‘~/tmp/scratch/xvfb-run.9xz7Lq’ ‘~/tmp/scratch/xvfb-run.CjMqYz’ ‘~/tmp/scratch/xvfb-run.CnbRn7’ ‘~/tmp/scratch/xvfb-run.Df53nA’ ‘~/tmp/scratch/xvfb-run.E65Grq’ ‘~/tmp/scratch/xvfb-run.E6YNrH’ ‘~/tmp/scratch/xvfb-run.E9lGKO’ ‘~/tmp/scratch/xvfb-run.EuFIWv’ ‘~/tmp/scratch/xvfb-run.FwrTMz’ ‘~/tmp/scratch/xvfb-run.HrlmEK’ ‘~/tmp/scratch/xvfb-run.IVpdfZ’ ‘~/tmp/scratch/xvfb-run.JBtuhT’ ‘~/tmp/scratch/xvfb-run.JSrClg’ ‘~/tmp/scratch/xvfb-run.LIUwf7’ ‘~/tmp/scratch/xvfb-run.LKUZ6L’ ‘~/tmp/scratch/xvfb-run.LVvDTQ’ ‘~/tmp/scratch/xvfb-run.MFqw8N’ ‘~/tmp/scratch/xvfb-run.N8wbbB’ ‘~/tmp/scratch/xvfb-run.NkJWeS’ ‘~/tmp/scratch/xvfb-run.O3a2f1’ ‘~/tmp/scratch/xvfb-run.OjEuwz’ ‘~/tmp/scratch/xvfb-run.PK5Ygh’ ‘~/tmp/scratch/xvfb-run.SEuSBs’ ‘~/tmp/scratch/xvfb-run.SsxDsN’ ‘~/tmp/scratch/xvfb-run.T61uPw’ ‘~/tmp/scratch/xvfb-run.TPhl7Y’ ‘~/tmp/scratch/xvfb-run.TzWChw’ ‘~/tmp/scratch/xvfb-run.U1i1Bb’ ‘~/tmp/scratch/xvfb-run.VoAJU6’ ‘~/tmp/scratch/xvfb-run.YBlxbV’ ‘~/tmp/scratch/xvfb-run.aKg0Ft’ ‘~/tmp/scratch/xvfb-run.dJhsiL’ ‘~/tmp/scratch/xvfb-run.hK3W69’ ‘~/tmp/scratch/xvfb-run.hWGMij’ ‘~/tmp/scratch/xvfb-run.hv7t65’ ‘~/tmp/scratch/xvfb-run.jZ7T8O’ ‘~/tmp/scratch/xvfb-run.jvcAxc’ ‘~/tmp/scratch/xvfb-run.kJZJmR’ ‘~/tmp/scratch/xvfb-run.kWBPxo’ ‘~/tmp/scratch/xvfb-run.kikLVY’ ‘~/tmp/scratch/xvfb-run.lmd0LM’ ‘~/tmp/scratch/xvfb-run.mB9hOl’ ‘~/tmp/scratch/xvfb-run.ojGZsg’ ‘~/tmp/scratch/xvfb-run.rnOeDW’ ‘~/tmp/scratch/xvfb-run.sHW2cE’ ‘~/tmp/scratch/xvfb-run.sLMjKw’ ‘~/tmp/scratch/xvfb-run.sZvTvQ’ ‘~/tmp/scratch/xvfb-run.vIzESL’ ‘~/tmp/scratch/xvfb-run.vRPDEH’ ‘~/tmp/scratch/xvfb-run.wW5QJm’ ‘~/tmp/scratch/xvfb-run.zFtees’ Flavor: r-devel-linux-x86_64-debian-gcc

Version: 3.1.0
Check: for non-standard things in the check directory
Result: NOTE Found the following files/directories: ‘mark001.resbatch’ Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc

Version: 3.1.0
Check: examples
Result: ERROR Running examples in ‘RMark-Ex.R’ failed The error most likely occurred in: > ### Name: Blackduck > ### Title: Black duck known fate data > ### Aliases: Blackduck > ### Keywords: datasets > > ### ** Examples > > > data(Blackduck) > # Change BirdAge to numeric; starting with version 1.6.3 factor variables are > # no longer allowed. They can work as in this example but they can be misleading > # and fail if the levels are non-numeric. The real parameters will remain > # unchanged but the betas will be different. > Blackduck$BirdAge=as.numeric(Blackduck$BirdAge)-1 > run.Blackduck=function() + { + # + # Process data + # + bduck.processed=process.data(Blackduck,model="Known") + # + # Create default design data + # + bduck.ddl=make.design.data(bduck.processed) + # + # Add occasion specific data min < 0; I have no idea what it is + # + bduck.ddl$S$min=c(4,6,7,7,7,6,5,5) + # + # Define range of models for S + # + S.dot=list(formula=~1) + S.time=list(formula=~time) + S.min=list(formula=~min) + S.BirdAge=list(formula=~BirdAge) + # + # Note that in the following model in the MARK example, the covariates + # have been standardized. That means that the beta parameters will be different + # for BirdAge, Weight and their interaction but the likelihood and real parameter + # estimates are the same. + # + S.BirdAgexWeight.min=list(formula=~min+BirdAge*Weight) + S.BirdAge.Weight=list(formula=~BirdAge+Weight) + # + # Create model list and run assortment of models + # + model.list=create.model.list("Known") + bduck.results=mark.wrapper(model.list,data=bduck.processed,ddl=bduck.ddl, + invisible=FALSE,threads=1,delete=TRUE) + + # + # Return model table and list of models + # + return(bduck.results) + } > bduck.results=run.Blackduck() S.BirdAge sh: mark: command not found Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile, : error in running command Error in run.mark.model(model, invisible = invisible, adjust = adjust, : Output file does not exist. Unable to find or run mark.exe S.BirdAge.Weight sh: mark: command not found Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile, : error in running command Error in run.mark.model(model, invisible = invisible, adjust = adjust, : Output file does not exist. Unable to find or run mark.exe S.BirdAgexWeight.min sh: mark: command not found Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile, : error in running command Error in run.mark.model(model, invisible = invisible, adjust = adjust, : Output file does not exist. Unable to find or run mark.exe S.dot sh: mark: command not found Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile, : error in running command Error in run.mark.model(model, invisible = invisible, adjust = adjust, : Output file does not exist. Unable to find or run mark.exe S.min sh: mark: command not found Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile, : error in running command Error in run.mark.model(model, invisible = invisible, adjust = adjust, : Output file does not exist. Unable to find or run mark.exe S.time sh: mark: command not found Warning in system(paste("mark i=", inputfile, " o=", outfile, " v=", vcvfile, : error in running command Error in run.mark.model(model, invisible = invisible, adjust = adjust, : Output file does not exist. Unable to find or run mark.exe No mark models found Error in collect.models() : Calls: run.Blackduck -> mark.wrapper -> collect.models Execution halted Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64