Last updated on 2025-12-20 01:50:21 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| datarium | 13 | ||
| factoextra | 13 | ||
| fastqcr | 13 | ||
| ggcorrplot | 2 | 11 | |
| ggpubr | 13 | ||
| rstatix | 13 | ||
| survminer | 1 | 3 | 9 |
Current CRAN status: OK: 13
Current CRAN status: NOTE: 13
Version: 1.0.7
Check: Rd files
Result: NOTE
checkRd: (-1) fviz_nbclust.Rd:75: Lost braces; missing escapes or markup?
75 | (2001) proposed: "the smallest k such that gap(k) >= gap(k+1) - s_{k+1}".
| ^
checkRd: (-1) fviz_nbclust.Rd:77: Lost braces; missing escapes or markup?
77 | SE.factor*s_{k+1}" where SE.factor is a numeric value which can be 1
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 13
Current CRAN status: NOTE: 2, OK: 11
Version: 0.1.4.1
Check: DESCRIPTION meta-information
Result: NOTE
Author field differs from that derived from Authors@R
Author: ‘Alboukadel Kassambara [aut, cre], Indrajeet Patil [ctb] (<https://orcid.org/0000-0003-1995-6531>, @patilindrajeets)’
Authors@R: ‘Alboukadel Kassambara [aut, cre], Indrajeet Patil [ctb] (ORCID: <https://orcid.org/0000-0003-1995-6531>, Twitter: @patilindrajeets)’
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 13
Current CRAN status: OK: 13
Current CRAN status: ERROR: 1, NOTE: 3, OK: 9
Version: 0.5.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘Informative_Survival_Plots.Rmd’ using rmarkdown
--- finished re-building ‘Informative_Survival_Plots.Rmd’
--- re-building ‘Playing_with_fonts_and_texts.Rmd’ using rmarkdown
--- finished re-building ‘Playing_with_fonts_and_texts.Rmd’
--- re-building ‘Specifiying_weights_in_log-rank_comparisons.Rmd’ using rmarkdown
Quitting from Specifiying_weights_in_log-rank_comparisons.Rmd:110-114 [unnamed-chunk-6]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `[.data.table`:
! attempt access index 4/4 in VECTOR_ELT
---
Backtrace:
▆
1. ├─survminer::ggsurvplot(...)
2. │ ├─base::do.call(ggsurvplot_core, opts)
3. │ └─survminer (local) `<fn>`(...)
4. │ └─survminer::surv_pvalue(...)
5. │ ├─... %>% dplyr::select(variable, dplyr::everything())
6. │ └─survminer:::.pvalue(...)
7. │ ├─survMisc::ten(eval(fit$call$formula), data = data)
8. │ └─survMisc:::ten.formula(eval(fit$call$formula), data = data)
9. │ ├─survMisc::ten(...)
10. │ └─survMisc:::ten.data.frame(...)
11. │ └─survMisc:::collapseDT(xDT, except = c("time", "status"), nName = "cg")
12. │ ├─...[]
13. │ └─data.table:::`[.data.table`(...)
14. └─dplyr::select(., variable, dplyr::everything())
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'Specifiying_weights_in_log-rank_comparisons.Rmd' failed with diagnostics:
attempt access index 4/4 in VECTOR_ELT
--- failed re-building ‘Specifiying_weights_in_log-rank_comparisons.Rmd’
--- re-building ‘ggforest-show-interactions-hazard-ratio.Rmd’ using rmarkdown
--- finished re-building ‘ggforest-show-interactions-hazard-ratio.Rmd’
SUMMARY: processing the following file failed:
‘Specifiying_weights_in_log-rank_comparisons.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.5.1
Check: installed package size
Result: NOTE
installed size is 6.0Mb
sub-directories of 1Mb or more:
doc 5.5Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64