Last updated on 2024-10-11 02:49:28 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.6 | 4.45 | 42.55 | 47.00 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 0.1.6 | 3.19 | 29.67 | 32.86 | NOTE | |
| r-devel-linux-x86_64-fedora-clang | 0.1.6 | 78.21 | NOTE | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.6 | 74.68 | NOTE | |||
| r-devel-windows-x86_64 | 0.1.6 | 7.00 | 73.00 | 80.00 | NOTE | |
| r-patched-linux-x86_64 | 0.1.6 | 4.98 | 39.82 | 44.80 | NOTE | |
| r-release-linux-x86_64 | 0.1.6 | 4.04 | 38.57 | 42.61 | ERROR | |
| r-release-macos-arm64 | 0.1.6 | 31.00 | NOTE | |||
| r-release-macos-x86_64 | 0.1.6 | 45.00 | NOTE | |||
| r-release-windows-x86_64 | 0.1.6 | 7.00 | 130.00 | 137.00 | NOTE | |
| r-oldrel-macos-arm64 | 0.1.6 | 34.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.1.6 | 47.00 | OK | |||
| r-oldrel-windows-x86_64 | 0.1.6 | 5.00 | 82.00 | 87.00 | OK |
Version: 0.1.6
Check: Rd files
Result: NOTE
checkRd: (-1) store_in_DB.Rd:89: Lost braces
89 | link{read_from_DB} function. Those parameters define rows and columns that will be returned.
| ^
checkRd: (-1) unite_two_DF.Rd:46: Lost braces; missing escapes or markup?
46 | \code{data1.shared.var} and {data2.shared.var} must contain unique values within its own data frame.
| ^
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-release-windows-x86_64
Version: 0.1.6
Check: examples
Result: ERROR
Running examples in ‘disprose-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: get_seq_info
> ### Title: Get NCBI sequence record
> ### Aliases: get_seq_info get_seq_info_fix info_listtodata
>
> ### ** Examples
>
> info.dataframe <- get_seq_info (org.name = "txid9606", db = "nucleotide", n.start = 1,
+ n.stop = 10, step = 5, return.dataframe = TRUE,
+ check.result = TRUE)
Error : HTTP failure: 500
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd">
<html>
<head>
<title>NCBI/eutils102-new - WWW Error 500 Diagnostic</title>
<style type="text/css">
h1.error {color: red; font-size: 40pt}
div.diags {text-indent: 0.5in }
</style>
</head>
<body>
<h1>Server Error</h1>
<p>Your request could not be processed due to a problem on
our Web server. This could be a transient problem, please
try the query again. If it doesn't clear up within a
reasonable period of time, e-mail a short description of your
query and the diagnostic information shown below to:</p>
<p>
pubmed@nlm.nih.gov - for problems with PubMed<br/>
webadmin@ncbi.nlm.nih.gov - for problems with other services<br/>
</p>
<p>Thank you for your assistance. We will try to fix the
problem as soon as possible.
</p>
<hr/>
<p>
Diagnostic Information:</p>
<div class="diags">Error: 500</div>
<div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e s e a r c h . f c g i ? d b = n u c l e o t i d e & a m p ; t e r m = t x i d 9 6 0 6 5 B O r g a n i s m 5 D & a m p ; r e t m o d e = x m l & a m p ; u s e h i s t o r y = y & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div>
<div class="diags">Client: 130.14.19.239</div>
<div class="diags">Server: eutils102-new</div>
<div class="diags">Time: Wed Oct 9 15:42:06 EDT 2024</div>
<p>
NOTE: The above is an internal URL which may differ from the one you used to address the page.</p>
<hr/>
<p>Rev. 01/04/08</p>
</body>
</html>
Error in get_seq_info(org.name = "txid9606", db = "nucleotide", n.start = 1, :
Could not connect to server. Please try again.
Execution halted
Flavor: r-release-linux-x86_64