Last updated on 2025-06-06 02:52:41 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.2.7 | 11.35 | 158.64 | 169.99 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 1.2.7 | 6.79 | 128.08 | 134.87 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.2.7 | 291.58 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 1.2.7 | 318.45 | OK | |||
| r-devel-windows-x86_64 | 1.2.7 | 13.00 | 199.00 | 212.00 | OK | |
| r-patched-linux-x86_64 | 1.2.7 | 11.56 | 176.27 | 187.83 | OK | |
| r-release-linux-x86_64 | 1.2.7 | 9.60 | 179.09 | 188.69 | OK | |
| r-release-macos-arm64 | 1.2.7 | 105.00 | OK | |||
| r-release-macos-x86_64 | 1.2.7 | 193.00 | OK | |||
| r-release-windows-x86_64 | 1.2.7 | 12.00 | 195.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.2.7 | 104.00 | NOTE | |||
| r-oldrel-macos-x86_64 | 1.2.7 | 203.00 | NOTE | |||
| r-oldrel-windows-x86_64 | 1.2.7 | 16.00 | 230.00 | 246.00 | ERROR |
Version: 1.2.7
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘example1.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-2-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 14175 bytes
Input file size = 15045 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 12898
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 12849
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 12712
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 12670
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 12670
Output IDAT size = 12670 bytes (1505 bytes decrease)
Output file size = 12748 bytes (2297 bytes = 15.27% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-6-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26729 bytes
Input file size = 26843 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21012
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21012
Output IDAT size = 21012 bytes (5717 bytes decrease)
Output file size = 21090 bytes (5753 bytes = 21.43% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32088 bytes
Input file size = 32202 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26038
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 26038
Output IDAT size = 26038 bytes (6050 bytes decrease)
Output file size = 26116 bytes (6086 bytes = 18.90% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30535 bytes
Input file size = 30649 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24239
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24239
Output IDAT size = 24239 bytes (6296 bytes decrease)
Output file size = 24317 bytes (6332 bytes = 20.66% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-15-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31864 bytes
Input file size = 31978 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25551
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25551
Output IDAT size = 25551 bytes (6313 bytes decrease)
Output file size = 25629 bytes (6349 bytes = 19.85% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/example1_files/figure-html/unnamed-chunk-16-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 10208 bytes
Input file size = 11078 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9047
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 9047
Output IDAT size = 9047 bytes (1161 bytes decrease)
Output file size = 9125 bytes (1953 bytes = 17.63% decrease)
Quitting from example1.Rmd:329-363 [unnamed-chunk-17]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `UseMethod()`:
! no applicable method for 'left_join' applied to an object of class "NULL"
---
Backtrace:
▆
1. └─dplyr::left_join(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'example1.Rmd' failed with diagnostics:
no applicable method for 'left_join' applied to an object of class "NULL"
--- failed re-building ‘example1.Rmd’
--- re-building ‘fitting.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-4-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31012 bytes
Input file size = 31126 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24573
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24573
Output IDAT size = 24573 bytes (6439 bytes decrease)
Output file size = 24651 bytes (6475 bytes = 20.80% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 36214 bytes
Input file size = 36340 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30984
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30984
Output IDAT size = 30984 bytes (5230 bytes decrease)
Output file size = 31062 bytes (5278 bytes = 14.52% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 23167 bytes
Input file size = 23269 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18993
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18993
Output IDAT size = 18993 bytes (4174 bytes decrease)
Output file size = 19071 bytes (4198 bytes = 18.04% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-9-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29382 bytes
Input file size = 29496 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23552
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23552
Output IDAT size = 23552 bytes (5830 bytes decrease)
Output file size = 23630 bytes (5866 bytes = 19.89% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-13-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 46530 bytes
Input file size = 46668 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37352
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 37352
Output IDAT size = 37352 bytes (9178 bytes decrease)
Output file size = 37430 bytes (9238 bytes = 19.80% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-16-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30785 bytes
Input file size = 30899 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24364
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24364
Output IDAT size = 24364 bytes (6421 bytes decrease)
Output file size = 24442 bytes (6457 bytes = 20.90% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-17-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31600 bytes
Input file size = 31714 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24908
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24908
Output IDAT size = 24908 bytes (6692 bytes decrease)
Output file size = 24986 bytes (6728 bytes = 21.21% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/fitting_files/figure-html/unnamed-chunk-26-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 6560 bytes
Input file size = 7418 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 5673
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 5666
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 4510
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 4510
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 4510
Output IDAT size = 4510 bytes (2050 bytes decrease)
Output file size = 4588 bytes (2830 bytes = 38.15% decrease)
--- finished re-building ‘fitting.Rmd’
--- re-building ‘intro.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/intro_files/figure-html/unnamed-chunk-5-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 19794 bytes
Input file size = 19896 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14933
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 14933
Output IDAT size = 14933 bytes (4861 bytes decrease)
Output file size = 15011 bytes (4885 bytes = 24.55% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/intro_files/figure-html/unnamed-chunk-6-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 21514 bytes
Input file size = 21616 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17227
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 17227
Output IDAT size = 17227 bytes (4287 bytes decrease)
Output file size = 17305 bytes (4311 bytes = 19.94% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/intro_files/figure-html/unnamed-chunk-7-1.png
288x288 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 15476 bytes
Input file size = 15566 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11207
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 11207
Output IDAT size = 11207 bytes (4269 bytes decrease)
Output file size = 11285 bytes (4281 bytes = 27.50% decrease)
--- finished re-building ‘intro.Rmd’
--- re-building ‘outcomes.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-3-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 30278 bytes
Input file size = 30392 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23814
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23814
Output IDAT size = 23814 bytes (6464 bytes decrease)
Output file size = 23892 bytes (6500 bytes = 21.39% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-5-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 32176 bytes
Input file size = 32290 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25339
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 25339
Output IDAT size = 25339 bytes (6837 bytes decrease)
Output file size = 25417 bytes (6873 bytes = 21.29% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-7-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 48573 bytes
Input file size = 48711 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35463
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 35463
Output IDAT size = 35463 bytes (13110 bytes decrease)
Output file size = 35541 bytes (13170 bytes = 27.04% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-8-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28123 bytes
Input file size = 28237 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22401
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22401
Output IDAT size = 22401 bytes (5722 bytes decrease)
Output file size = 22479 bytes (5758 bytes = 20.39% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 31012 bytes
Input file size = 31126 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24573
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 24573
Output IDAT size = 24573 bytes (6439 bytes decrease)
Output file size = 24651 bytes (6475 bytes = 20.80% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-12-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 28167 bytes
Input file size = 28281 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22023
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22023
Output IDAT size = 22023 bytes (6144 bytes decrease)
Output file size = 22101 bytes (6180 bytes = 21.85% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-14-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 69672 bytes
Input file size = 69846 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56297
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 56297
Output IDAT size = 56297 bytes (13375 bytes decrease)
Output file size = 56375 bytes (13471 bytes = 19.29% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/outcomes_files/figure-html/unnamed-chunk-16-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 27844 bytes
Input file size = 27958 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22630
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 22630
Output IDAT size = 22630 bytes (5214 bytes decrease)
Output file size = 22708 bytes (5250 bytes = 18.78% decrease)
--- finished re-building ‘outcomes.Rmd’
--- re-building ‘structures.Rmd’ using rmarkdown
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-6-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 24989 bytes
Input file size = 25103 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19190
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 19190
Output IDAT size = 19190 bytes (5799 bytes decrease)
Output file size = 19268 bytes (5835 bytes = 23.24% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-10-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 38623 bytes
Input file size = 38749 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30647
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 30647
Output IDAT size = 30647 bytes (7976 bytes decrease)
Output file size = 30725 bytes (8024 bytes = 20.71% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-14-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 26468 bytes
Input file size = 26582 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21256
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 21256
Output IDAT size = 21256 bytes (5212 bytes decrease)
Output file size = 21334 bytes (5248 bytes = 19.74% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-17-1.png
672x960 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 45596 bytes
Input file size = 46514 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 42560
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 41850
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 41850
Output IDAT size = 41850 bytes (3746 bytes decrease)
Output file size = 41928 bytes (4586 bytes = 9.86% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-20-1.png
672x480 pixels, 8 bits/pixel, 256 colors in palette
Reducing image to 8 bits/pixel, grayscale
Input IDAT size = 19399 bytes
Input file size = 20281 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 18207
zc = 9 zm = 8 zs = 1 f = 0 IDAT size = 17914
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5 IDAT size = 14645
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 14598
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 1 f = 5 IDAT size = 14598
Output IDAT size = 14598 bytes (4801 bytes decrease)
Output file size = 14676 bytes (5605 bytes = 27.64% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-21-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29475 bytes
Input file size = 29589 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23732
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23732
Output IDAT size = 23732 bytes (5743 bytes decrease)
Output file size = 23810 bytes (5779 bytes = 19.53% decrease)
** Processing: /home/hornik/tmp/R.check/r-devel-clang/Work/PKGS/kDGLM.Rcheck/vign_test/kDGLM/vignettes/structures_files/figure-html/unnamed-chunk-22-1.png
672x480 pixels, 3x8 bits/pixel, RGB
Input IDAT size = 29527 bytes
Input file size = 29641 bytes
Trying:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23876
zc = 9 zm = 8 zs = 1 f = 0
zc = 1 zm = 8 zs = 2 f = 0
zc = 9 zm = 8 zs = 3 f = 0
zc = 9 zm = 8 zs = 0 f = 5
zc = 9 zm = 8 zs = 1 f = 5
zc = 1 zm = 8 zs = 2 f = 5
zc = 9 zm = 8 zs = 3 f = 5
Selecting parameters:
zc = 9 zm = 8 zs = 0 f = 0 IDAT size = 23876
Output IDAT size = 23876 bytes (5651 bytes decrease)
Output file size = 23954 bytes (5687 bytes = 19.19% decrease)
--- finished re-building ‘structures.Rmd’
SUMMARY: processing the following file failed:
‘example1.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.2.7
Check: installed package size
Result: NOTE
installed size is 10.8Mb
sub-directories of 1Mb or more:
doc 9.9Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Version: 1.2.7
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'example1.Rmd' using rmarkdown
Quitting from example1.Rmd:329-363 [unnamed-chunk-17]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `UseMethod()`:
! no applicable method for 'left_join' applied to an object of class "NULL"
---
Backtrace:
▆
1. └─dplyr::left_join(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'example1.Rmd' failed with diagnostics:
no applicable method for 'left_join' applied to an object of class "NULL"
--- failed re-building 'example1.Rmd'
--- re-building 'fitting.Rmd' using rmarkdown
--- finished re-building 'fitting.Rmd'
--- re-building 'intro.Rmd' using rmarkdown
--- finished re-building 'intro.Rmd'
--- re-building 'outcomes.Rmd' using rmarkdown
--- finished re-building 'outcomes.Rmd'
--- re-building 'structures.Rmd' using rmarkdown
--- finished re-building 'structures.Rmd'
SUMMARY: processing the following file failed:
'example1.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64