Last updated on 2025-11-06 01:50:19 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.4 | 12.73 | 259.99 | 272.72 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.4 | 10.01 | 218.21 | 228.22 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.4 | 33.00 | 275.91 | 308.91 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.4 | 32.00 | 335.72 | 367.72 | OK | |
| r-devel-windows-x86_64 | 1.1.4 | 22.00 | 187.00 | 209.00 | OK | |
| r-patched-linux-x86_64 | 1.1.4 | 15.18 | 260.60 | 275.78 | OK | |
| r-release-linux-x86_64 | 1.1.4 | 15.44 | 269.38 | 284.82 | OK | |
| r-release-macos-arm64 | 1.1.4 | 6.00 | 96.00 | 102.00 | OK | |
| r-release-macos-x86_64 | 1.1.4 | 14.00 | 210.00 | 224.00 | ERROR | |
| r-release-windows-x86_64 | 1.1.4 | 20.00 | 187.00 | 207.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.4 | 6.00 | 92.00 | 98.00 | OK | |
| r-oldrel-macos-x86_64 | 1.1.4 | 15.00 | 178.00 | 193.00 | ERROR | |
| r-oldrel-windows-x86_64 | 1.1.4 | 25.00 | 239.00 | 264.00 | OK |
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [84s/136s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.555, system: 0.036, elapsed: 2.554 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.662, system: 0.088, elapsed: 15.755 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.013, elapsed: 0.339 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 4.004, system: 0.198, elapsed: 6.562 seconds]
Computing values for grid cells...
... done. [user: 0.174, system: 0.005, elapsed: 0.239 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.161, system: 0.365, elapsed: 26.700 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.565, system: 0.040, elapsed: 2.097 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.748, system: 0.138, elapsed: 17.193 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.197, system: 0.014, elapsed: 0.220 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.857, system: 0.169, elapsed: 5.776 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.003, elapsed: 0.277 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.092, system: 0.385, elapsed: 26.309 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.616, system: 0.031, elapsed: 2.889 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.615, system: 0.071, elapsed: 16.044 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.011, elapsed: 0.303 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.875, system: 0.188, elapsed: 6.304 seconds]
Computing values for grid cells...
... done. [user: 0.175, system: 0.003, elapsed: 0.338 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.229, system: 0.221, elapsed: 1.419 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 17.343, system: 0.548, elapsed: 28.556 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.561, system: 0.034, elapsed: 2.726 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.669, system: 0.080, elapsed: 15.772 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.195, system: 0.012, elapsed: 0.347 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.882, system: 0.180, elapsed: 6.899 seconds]
Computing values for grid cells...
... done. [user: 0.171, system: 0.004, elapsed: 0.309 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.830, system: 0.464, elapsed: 18.260 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.974, system: 0.805, elapsed: 45.507 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-release-macos-x86_64
Version: 1.1.4
Check: tests
Result: ERROR
Running ‘testthat.R’ [83s/128s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> # This file is part of the standard setup for testthat.
> # It is recommended that you do not modify it.
> #
> # Where should you do additional test configuration?
> # Learn more about the roles of various files in:
> # * https://r-pkgs.org/testing-design.html#sec-tests-files-overview
> # * https://testthat.r-lib.org/articles/special-files.html
>
> library(testthat)
> library(mapi)
>
> test_check("mapi")
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Estimated halfwidth: 286.835888
Estimated halfwidth: 143.417944
Linking to GEOS 3.13.0, GDAL 3.8.5, PROJ 9.5.1; sf_use_s2() is TRUE
Building local cartesian grid...
... 1071 cells
Building worldwide lat/lon grid...
Resolution: 5, Area (km^2): 209903.548034604, Spacing (km): 452.492014449456, CLS (km): 517.004996903084
... 2432 cells
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.593, system: 0.043, elapsed: 2.582 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.531, system: 0.053, elapsed: 15.342 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.016, elapsed: 0.340 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.816, system: 0.205, elapsed: 6.401 seconds]
Computing values for grid cells...
... done. [user: 0.185, system: 0.007, elapsed: 0.285 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 15.883, system: 0.349, elapsed: 25.896 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.641, system: 0.063, elapsed: 2.712 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.768, system: 0.204, elapsed: 17.996 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.207, system: 0.017, elapsed: 0.413 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.965, system: 0.227, elapsed: 7.294 seconds]
Computing values for grid cells...
... done. [user: 0.181, system: 0.005, elapsed: 0.269 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.329, system: 0.559, elapsed: 29.721 seconds]
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.633, system: 0.034, elapsed: 2.334 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.499, system: 0.105, elapsed: 14.280 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.196, system: 0.014, elapsed: 0.301 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.553, system: 0.166, elapsed: 4.628 seconds]
Computing values for grid cells...
... done. [user: 0.184, system: 0.015, elapsed: 0.337 seconds]
Starting 4 permutations...
... parallelized over 2 cores ...
1 2 4 3
... computing probabilities from permuted values ...
... done. [user: 1.135, system: 0.250, elapsed: 1.131 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 16.843, system: 0.620, elapsed: 24.006 seconds]
Building local cartesian grid...
... 1071 cells
MAPI COMPUTATION STARTED
Checking data...
`metric` provided as a vector
Unique names ... OK
All samples used in metric ... OK
... 200 samples and 39800 metric left.
Building 20100 elliptical polygons...
... 20100 ellipses. [user: 1.645, system: 0.039, elapsed: 2.701 seconds]
Computing spatial intersection between 1071 grid cells and 20100 ellipses...
... done. [user: 9.605, system: 0.104, elapsed: 14.882 seconds]
Building sample pairs...
... 39800 sample pairs. [user: 0.199, system: 0.014, elapsed: 0.403 seconds]
Matching grid cells with sample pairs...
... 2295394 matches found. [user: 3.805, system: 0.189, elapsed: 5.943 seconds]
Computing values for grid cells...
... done. [user: 0.180, system: 0.006, elapsed: 0.263 seconds]
Starting 50 permutations...
... serially ...
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... computing probabilities from permuted values ...
... done. [user: 10.736, system: 0.483, elapsed: 15.487 seconds]
MAPI COMPUTATION ENDED. [TOTAL: user: 26.830, system: 0.866, elapsed: 40.742 seconds]
Significant areas aggregation, with percentile filter minQ > 0.000000 and alpha = 0.050000 ...
... 1 upper-tail and 3 lower-tail significant areas returned
Building local cartesian grid...
... 1045 cells
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-MAPI_Varicell.R:15:5'): MAPI_Varicell ────────────────────────
sd(sf::st_area(grid.var)) (`actual`) not equal to 963339.563502512 (`expected`).
`actual`: 963429.6
`expected`: 963339.6
[ FAIL 1 | WARN 0 | SKIP 0 | PASS 19 ]
Error: Test failures
Execution halted
Flavor: r-oldrel-macos-x86_64