Last updated on 2026-03-11 01:54:16 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| wrGraph | 14 | ||
| wrMisc | 14 | ||
| wrProteo | 2 | 3 | 9 |
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: ERROR: 2, NOTE: 3, OK: 9
Version: 1.13.3
Check: examples
Result: ERROR
Running examples in ‘wrProteo-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: extractTestingResults
> ### Title: Extract Results From Moderated t-tests
> ### Aliases: extractTestingResults
>
> ### ** Examples
>
> grp <- factor(rep(LETTERS[c(3,1,4)],c(2,3,3)))
> set.seed(2017); t8 <- matrix(round(rnorm(208*8,10,0.4),2), ncol=8,
+ dimnames=list(paste(letters[],rep(1:8,each=26),sep=""), paste(grp,c(1:2,1:3,1:3),sep="")))
> t8[3:6,1:2] <- t8[3:6,1:2] +3 # augment lines 3:6 (c-f)
> t8[5:8,c(1:2,6:8)] <- t8[5:8,c(1:2,6:8)] -1.5 # lower lines
> t8[6:7,3:5] <- t8[6:7,3:5] +2.2 # augment lines
> ## expect to find C/A in c,d,g, (h)
> ## expect to find C/D in c,d,e,f
> ## expect to find A/D in f,g,(h)
> library(wrMisc) # for testing we'll use this package
> test8 <- moderTestXgrp(t8, grp)
> extractTestingResults(test8)
extractTestingResults : Cannot find list-element 'annot' in test8
Error in wrMisc::sampNoDeMArrayLM(stat, compNo, lstP = useFdrTy) :
unused argument (lstP = useFdrTy)
Calls: extractTestingResults
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.13.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
...
--- re-building ‘wrProteoVignette1.Rmd’ using rmarkdown
Quitting from wrProteoVignette1.Rmd:798-800 [results1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `wrMisc::sampNoDeMArrayLM()`:
! unused argument (lstP = useFdrTy)
---
Backtrace:
▆
1. └─wrProteo::extractTestingResults(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'wrProteoVignette1.Rmd' failed with diagnostics:
unused argument (lstP = useFdrTy)
--- failed re-building ‘wrProteoVignette1.Rmd’
--- re-building ‘wrProteoVignetteUPS1.Rmd’ using rmarkdown
Quitting from wrProteoVignetteUPS1.Rmd:576-580 [check2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `wrMisc::sampNoDeMArrayLM()`:
! unused argument (lstP = useFdrTy)
---
Backtrace:
▆
1. └─wrProteo::extractTestingResults(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'wrProteoVignetteUPS1.Rmd' failed with diagnostics:
unused argument (lstP = useFdrTy)
--- failed re-building ‘wrProteoVignetteUPS1.Rmd’
SUMMARY: processing the following files failed:
‘wrProteoVignette1.Rmd’ ‘wrProteoVignetteUPS1.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.13.3
Check: examples
Result: ERROR
Running examples in ‘wrProteo-Ex.R’ failed
The error most likely occurred in:
> ### Name: extractTestingResults
> ### Title: Extract Results From Moderated t-tests
> ### Aliases: extractTestingResults
>
> ### ** Examples
>
> grp <- factor(rep(LETTERS[c(3,1,4)],c(2,3,3)))
> set.seed(2017); t8 <- matrix(round(rnorm(208*8,10,0.4),2), ncol=8,
+ dimnames=list(paste(letters[],rep(1:8,each=26),sep=""), paste(grp,c(1:2,1:3,1:3),sep="")))
> t8[3:6,1:2] <- t8[3:6,1:2] +3 # augment lines 3:6 (c-f)
> t8[5:8,c(1:2,6:8)] <- t8[5:8,c(1:2,6:8)] -1.5 # lower lines
> t8[6:7,3:5] <- t8[6:7,3:5] +2.2 # augment lines
> ## expect to find C/A in c,d,g, (h)
> ## expect to find C/D in c,d,e,f
> ## expect to find A/D in f,g,(h)
> library(wrMisc) # for testing we'll use this package
> test8 <- moderTestXgrp(t8, grp)
> extractTestingResults(test8)
extractTestingResults : Cannot find list-element 'annot' in test8
Error in wrMisc::sampNoDeMArrayLM(stat, compNo, lstP = useFdrTy) :
unused argument (lstP = useFdrTy)
Calls: extractTestingResults
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.13.3
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘wrProteoVignette1.Rmd’ using rmarkdown
Quitting from wrProteoVignette1.Rmd:798-800 [results1]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `wrMisc::sampNoDeMArrayLM()`:
! unused argument (lstP = useFdrTy)
---
Backtrace:
▆
1. └─wrProteo::extractTestingResults(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'wrProteoVignette1.Rmd' failed with diagnostics:
unused argument (lstP = useFdrTy)
--- failed re-building ‘wrProteoVignette1.Rmd’
--- re-building ‘wrProteoVignetteUPS1.Rmd’ using rmarkdown
Quitting from wrProteoVignetteUPS1.Rmd:576-580 [check2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `wrMisc::sampNoDeMArrayLM()`:
! unused argument (lstP = useFdrTy)
---
Backtrace:
▆
1. └─wrProteo::extractTestingResults(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'wrProteoVignetteUPS1.Rmd' failed with diagnostics:
unused argument (lstP = useFdrTy)
--- failed re-building ‘wrProteoVignetteUPS1.Rmd’
SUMMARY: processing the following files failed:
‘wrProteoVignette1.Rmd’ ‘wrProteoVignetteUPS1.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.13.3
Check: installed package size
Result: NOTE
installed size is 6.5Mb
sub-directories of 1Mb or more:
doc 2.8Mb
extdata 2.5Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64