Last updated on 2026-04-26 02:49:55 CEST.
| Package | ERROR | OK |
|---|---|---|
| SurvMetrics | 1 | 11 |
Current CRAN status: ERROR: 1, OK: 11
Version: 0.5.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/3s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(SurvMetrics)
> Sys.setenv("OMP_THREAD_LIMIT" = 1)
> test_check("SurvMetrics")
randomForestSRC 3.6.0
Type rfsrc.news() to see new features, changes, and bug fixes.
Loading required package: prodlim
Error: package or namespace load failed for 'prodlim' in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
Saving _problems/test-Brier-35.R
Loading required package: prodlim
Error: package or namespace load failed for 'prodlim' in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
Saving _problems/test-Cindex-62.R
Loading required package: prodlim
Error: package or namespace load failed for 'prodlim' in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
Saving _problems/test-IAEISE-5.R
Loading required package: prodlim
Error: package or namespace load failed for 'prodlim' in dyn.load(file, DLLpath = DLLpath, ...):
unable to load shared object '/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so':
dlopen(/Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so, 0x0006): Symbol not found: _IS_GROWABLE
Referenced from: <A2E3C2EA-FFF1-35E6-9621-C23F120F8433> /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/data.table/libs/data_table.so
Expected in: <0A9590E7-21FF-3C2D-B0BD-160A5BF4B716> /Library/Frameworks/R.framework/Versions/4.6-x86_64/Resources/lib/libR.dylib
Saving _problems/test-IBS-5.R
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 38 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-Brier.R:35:3'): Brier ──────────────────────────────────────────
Error: package 'prodlim' could not be loaded
Backtrace:
▆
1. └─base::library(pec) at test-Brier.R:35:3
2. └─base::.getRequiredPackages2(...)
── Error ('test-Cindex.R:62:3'): Cindex ────────────────────────────────────────
Error: package 'prodlim' could not be loaded
Backtrace:
▆
1. └─base::library(pec) at test-Cindex.R:62:3
2. └─base::.getRequiredPackages2(...)
── Error ('test-IAEISE.R:5:3'): IAEISE ─────────────────────────────────────────
Error: package 'prodlim' could not be loaded
Backtrace:
▆
1. └─base::library(pec) at test-IAEISE.R:5:3
2. └─base::.getRequiredPackages2(...)
── Error ('test-IBS.R:5:3'): IBS ───────────────────────────────────────────────
Error: package 'prodlim' could not be loaded
Backtrace:
▆
1. └─base::library(pec) at test-IBS.R:5:3
2. └─base::.getRequiredPackages2(...)
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 38 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 0.5.1
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘SurvMetrics-vignette.Rmd’ using rmarkdown
Quitting from SurvMetrics-vignette.Rmd:85-93 [unnamed-chunk-2]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `library()`:
! there is no package called 'caret'
---
Backtrace:
▆
1. └─base::library(caret)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'SurvMetrics-vignette.Rmd' failed with diagnostics:
there is no package called 'caret'
--- failed re-building ‘SurvMetrics-vignette.Rmd’
SUMMARY: processing the following file failed:
‘SurvMetrics-vignette.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-x86_64