LISTO: Performing Comprehensive Overlap Assessments

The implementation of a statistical framework for performing overlap assessments on lists comprising sets of strings (such as lists of gene sets) described in Stoica (2023) <https://ora.ox.ac.uk/objects/uuid:b0847284-a02f-47ee-88e3-a3c4e0cdb8b1>. It can assess overlaps of pair of sets of strings selected from the same universe or from different universes, and overlaps of triplets of sets of strings selected from the same universe. Designed for single-cell RNA-sequencing data analysis applications, but suitable for other purposes as well.

Version: 0.6.5
Imports: methods, parallel, primes, statisfactory, stats
Suggests: qs2, scRNAseq, scuttle, Seurat, testthat (≥ 3.0.0), withr
Published: 2026-03-06
DOI: 10.32614/CRAN.package.LISTO (may not be active yet)
Author: Andrei-Florian Stoica ORCID iD [aut, cre]
Maintainer: Andrei-Florian Stoica <andreistoica at foxmail.com>
BugReports: https://github.com/andrei-stoica26/LISTO/issues
License: MIT + file LICENSE
URL: https://github.com/andrei-stoica26/LISTO
NeedsCompilation: no
Materials: README, NEWS
CRAN checks: LISTO results

Documentation:

Reference manual: LISTO.html , LISTO.pdf

Downloads:

Package source: LISTO_0.6.5.tar.gz
Windows binaries: r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries: r-release (arm64): LISTO_0.6.5.tgz, r-oldrel (arm64): LISTO_0.6.5.tgz, r-release (x86_64): not available, r-oldrel (x86_64): not available

Linking:

Please use the canonical form https://CRAN.R-project.org/package=LISTO to link to this page.