plot() and plot_edr(): axes are not
constrained to “Axis X”.
vignette("EDR_framework"): new plots showing
ecological succession.
vignette("Resilience"): new Section 2.
Packages in Suggests are used conditionally in examples, tests, and vignettes.
state_to_trajectory():
method = "projection" considers the nearest states in
reference to calculate dissimilarities between the
target_states and reference.
method = "mixed" returns the same values than
method = "projection".plot.RETRA() correctly represents trajectories when
states are not in order.
plot_edr() does not print [[i]]NULL to
the console.
retra_edr(): fixed error when
!is.null(Dim).
Fixed errors due to incompatibilities with ecotraj 1.1.1
plot_edr() represents EDR trajectories and states
according to pre-defined colors or variablesresistance() calculates resistance to
disturbances.
amplitude() calculates the amplitude of disturbed
trajectories.
recovery() calculates the recovery towards reference
trajectories.
net_change() calculates the net change of disturbed
trajectories.
state_to_trajectory() defines the position of a
state with respect to a trajectory.
EDR_data now includes an abundance matrix for
disturbed communities.
New vignette("Resilience") which describes how
ecological resilience can be assessed.
dEve() error now does not refer to any reference
trajectory.
define_retra() returns error if certain characters
are used in trajectories.
dist_edr() can be used when states are not in
order.