enrichit: 'C++' Implementations of Functional Enrichment Analysis

Fast implementations of functional enrichment analysis methods using 'C++' via 'Rcpp'. Currently provides Over-Representation Analysis (ORA) and Gene Set Enrichment Analysis (GSEA). The multilevel GSEA algorithm is derived from the 'fgsea' package. Methods are described in Subramanian et al. (2005) <doi:10.1073/pnas.0506580102> and Korotkevich et al. (2021) <doi:10.1101/060012>.

Version:	0.0.8
Depends:	R (≥ 3.5.0)
Imports:	methods, Rcpp (≥ 1.0.10), stats, yulab.utils (> 0.2.1)
LinkingTo:	Rcpp
Suggests:	AnnotationDbi, clusterProfiler, DOSE, gson, qvalue, quarto, testthat
Published:	2025-12-22
DOI:	10.32614/CRAN.package.enrichit (may not be active yet)
Author:	Guangchuang Yu [aut, cre]
Maintainer:	Guangchuang Yu <guangchuangyu at gmail.com>
License:	Artistic-2.0
NeedsCompilation:	yes
Materials:	README, NEWS
CRAN checks:	enrichit results

Documentation:

Reference manual:	enrichit.html , enrichit.pdf
Vignettes:	enrichit (source, R code)

Downloads:

Package source:	enrichit_0.0.8.tar.gz
Windows binaries:	r-devel: not available, r-release: not available, r-oldrel: not available
macOS binaries:	r-release (arm64): enrichit_0.0.8.tgz, r-oldrel (arm64): enrichit_0.0.8.tgz, r-release (x86_64): enrichit_0.0.8.tgz, r-oldrel (x86_64): enrichit_0.0.8.tgz

Linking:

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