Provides a fast and accurate pipeline for single-cell analyses.
The 'scDHA' software package can perform clustering, dimension reduction and visualization, classification, and time-trajectory inference on single-cell data (Tran et.al. (2021) <doi:10.1038/s41467-021-21312-2>).
| Version: |
1.2.3 |
| Depends: |
R (≥ 3.4) |
| Imports: |
matrixStats, foreach, doParallel, igraph, Matrix, uwot, cluster, Rcpp, RcppParallel, RcppAnnoy, methods, torch (≥
0.3.0), RhpcBLASctl, coro |
| LinkingTo: |
Rcpp, RcppArmadillo, RcppParallel, RcppAnnoy |
| Suggests: |
testthat, knitr, mclust |
| Published: |
2025-09-23 |
| DOI: |
10.32614/CRAN.package.scDHA |
| Author: |
Ha Nguyen [cre],
Duc Tran [aut],
Tin Nguyen [fnd],
Hao Chen [ctb] |
| Maintainer: |
Ha Nguyen <hvn0006 at auburn.edu> |
| BugReports: |
https://github.com/duct317/scDHA/issues |
| License: |
GPL-3 |
| Copyright: |
see file COPYRIGHTS |
| URL: |
https://github.com/duct317/scDHA |
| NeedsCompilation: |
yes |
| Citation: |
scDHA citation info |
| Materials: |
README, NEWS |
| CRAN checks: |
scDHA results |