Last updated on 2026-08-04 02:50:26 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-gcc | 0.3.0 | 1.68 | 21.77 | 23.45 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.3.0 | 42.26 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.3.0 | 20.21 | OK | |||
| r-devel-windows-x86_64 | 0.3.0 | 8.00 | 67.00 | 75.00 | OK | |
| r-release-linux-x86_64 | 0.3.0 | 1.92 | 24.85 | 26.77 | ERROR | |
| r-release-macos-arm64 | 0.3.0 | 1.00 | 11.00 | 12.00 | OK | |
| r-release-macos-x86_64 | 0.3.0 | 2.00 | 46.00 | 48.00 | OK | |
| r-release-windows-x86_64 | 0.3.0 | 7.00 | 72.00 | 79.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.0 | 1.00 | 14.00 | 15.00 | OK | |
| r-oldrel-macos-x86_64 | 0.3.0 | 2.00 | 49.00 | 51.00 | OK | |
| r-oldrel-windows-x86_64 | 0.3.0 | 7.00 | 60.00 | 67.00 | OK |
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [2s/2s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biocharkitgui)
>
> test_check("biocharkitgui")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-report.R:41:3'): gui_render_report renders a real HTML file from a populated store ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(store, out) at test-report.R:41:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-report.R:58:3'): gui_render_report handles an entirely empty store gracefully ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(empty_store, out) at test-report.R:58:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: for new files in some other directories
Result: NOTE
Found the following files/directories:
‘~/tmp/scratch/Rtmp0QRbLj’ ‘~/tmp/scratch/Rtmp0njJab’
‘~/tmp/scratch/Rtmp1nT1lc’ ‘~/tmp/scratch/Rtmp2YEE8p’
‘~/tmp/scratch/Rtmp2mWbrX’ ‘~/tmp/scratch/Rtmp54VVpk’
‘~/tmp/scratch/Rtmp57U5eS’ ‘~/tmp/scratch/Rtmp5hptz0’
‘~/tmp/scratch/Rtmp6jTbcH’ ‘~/tmp/scratch/Rtmp78GhBM’
‘~/tmp/scratch/Rtmp7Uj055’ ‘~/tmp/scratch/Rtmp81jTwf’
‘~/tmp/scratch/Rtmp93i0sX’ ‘~/tmp/scratch/Rtmp9lea6R’
‘~/tmp/scratch/RtmpADTvSU’ ‘~/tmp/scratch/RtmpAR75ST’
‘~/tmp/scratch/RtmpB0yCdc’ ‘~/tmp/scratch/RtmpBW837X’
‘~/tmp/scratch/RtmpBWNK3O’ ‘~/tmp/scratch/RtmpCuH53f’
‘~/tmp/scratch/RtmpD6UiCZ’ ‘~/tmp/scratch/RtmpDm3YAC’
‘~/tmp/scratch/RtmpEGMO66’ ‘~/tmp/scratch/RtmpFMD2AH’
‘~/tmp/scratch/RtmpFbAXYL’ ‘~/tmp/scratch/RtmpFecdos’
‘~/tmp/scratch/RtmpFgWov1’ ‘~/tmp/scratch/RtmpG0k6xR’
‘~/tmp/scratch/RtmpHWQFgQ’ ‘~/tmp/scratch/RtmpHnpGVe’
‘~/tmp/scratch/RtmpIrhn58’ ‘~/tmp/scratch/RtmpJFWsAB’
‘~/tmp/scratch/RtmpJJBuZg’ ‘~/tmp/scratch/RtmpKBQEqe’
‘~/tmp/scratch/RtmpKC6n8I’ ‘~/tmp/scratch/RtmpKulwZY’
‘~/tmp/scratch/RtmpKzJi47’ ‘~/tmp/scratch/RtmpM4qe8e’
‘~/tmp/scratch/RtmpN6gN9L’ ‘~/tmp/scratch/RtmpNBgu7N’
‘~/tmp/scratch/RtmpNFkI8f’ ‘~/tmp/scratch/RtmpOstNmT’
‘~/tmp/scratch/RtmpPFphrT’ ‘~/tmp/scratch/RtmpPMrftG’
‘~/tmp/scratch/RtmpPjFw8W’ ‘~/tmp/scratch/RtmpQBvXiT’
‘~/tmp/scratch/RtmpQULDNt’ ‘~/tmp/scratch/RtmpRb0EHb’
‘~/tmp/scratch/RtmpSEJvYG’ ‘~/tmp/scratch/RtmpTpu69W’
‘~/tmp/scratch/RtmpV1Fls7’ ‘~/tmp/scratch/RtmpVRH5yT’
‘~/tmp/scratch/RtmpVamF67’ ‘~/tmp/scratch/RtmpWPlQ1o’
‘~/tmp/scratch/RtmpWYKVLm’ ‘~/tmp/scratch/RtmpWksEix’
‘~/tmp/scratch/RtmpX945pX’ ‘~/tmp/scratch/RtmpXg20Kp’
‘~/tmp/scratch/RtmpXipluz’ ‘~/tmp/scratch/RtmpXoyds5’
‘~/tmp/scratch/RtmpXr23Hd’ ‘~/tmp/scratch/RtmpYZKidq’
‘~/tmp/scratch/RtmpYfKU24’ ‘~/tmp/scratch/RtmpZKUJwT’
‘~/tmp/scratch/RtmpZTUzQo’ ‘~/tmp/scratch/RtmpZVYRN3’
‘~/tmp/scratch/RtmpZgPtDy’ ‘~/tmp/scratch/RtmpZnSj6M’
‘~/tmp/scratch/RtmpZql03D’ ‘~/tmp/scratch/Rtmpa9NRv7’
‘~/tmp/scratch/RtmpbiqFdt’ ‘~/tmp/scratch/RtmpdRAfDs’
‘~/tmp/scratch/RtmpdSS829’ ‘~/tmp/scratch/RtmpdyxYbz’
‘~/tmp/scratch/RtmpeCVzYm’ ‘~/tmp/scratch/RtmpeFrWCe’
‘~/tmp/scratch/RtmpepqWLy’ ‘~/tmp/scratch/RtmpertjlX’
‘~/tmp/scratch/Rtmpf3Cx2u’ ‘~/tmp/scratch/RtmpfMS849’
‘~/tmp/scratch/RtmpfbXwL2’ ‘~/tmp/scratch/Rtmphka5r6’
‘~/tmp/scratch/RtmpiJp457’ ‘~/tmp/scratch/RtmpiT9t9p’
‘~/tmp/scratch/Rtmpj746RV’ ‘~/tmp/scratch/Rtmpkb6tCZ’
‘~/tmp/scratch/Rtmpl5N6Y7’ ‘~/tmp/scratch/Rtmpl9AqDb’
‘~/tmp/scratch/RtmplUXdOV’ ‘~/tmp/scratch/RtmpndCG76’
‘~/tmp/scratch/Rtmpng39jn’ ‘~/tmp/scratch/RtmpnhtbIC’
‘~/tmp/scratch/Rtmpno7KzN’ ‘~/tmp/scratch/RtmpoYLc8v’
‘~/tmp/scratch/Rtmposb2i8’ ‘~/tmp/scratch/RtmppccD4x’
‘~/tmp/scratch/RtmprOnlPV’ ‘~/tmp/scratch/RtmprW9Xa5’
‘~/tmp/scratch/RtmproFWLP’ ‘~/tmp/scratch/RtmpseBPGN’
‘~/tmp/scratch/Rtmpss69Lb’ ‘~/tmp/scratch/RtmpsxrMmA’
‘~/tmp/scratch/Rtmpt9rK7M’ ‘~/tmp/scratch/RtmptRj5d1’
‘~/tmp/scratch/RtmpvcIDCz’ ‘~/tmp/scratch/Rtmpx456Ex’
‘~/tmp/scratch/Rtmpx6pcTI’ ‘~/tmp/scratch/RtmpyHXHHS’
‘~/tmp/scratch/RtmpzhbPOu’ ‘~/tmp/scratch/RtmpzjdJl5’
‘~/tmp/scratch/xvfb-run.1HiNsg’ ‘~/tmp/scratch/xvfb-run.3UA7Wl’
‘~/tmp/scratch/xvfb-run.5zZHZi’ ‘~/tmp/scratch/xvfb-run.61fQX4’
‘~/tmp/scratch/xvfb-run.6TIKdX’ ‘~/tmp/scratch/xvfb-run.71vfrM’
‘~/tmp/scratch/xvfb-run.8WmNgN’ ‘~/tmp/scratch/xvfb-run.BA639l’
‘~/tmp/scratch/xvfb-run.DcVXsq’ ‘~/tmp/scratch/xvfb-run.E25Im3’
‘~/tmp/scratch/xvfb-run.FuRcFB’ ‘~/tmp/scratch/xvfb-run.GBVJLD’
‘~/tmp/scratch/xvfb-run.GdJwuK’ ‘~/tmp/scratch/xvfb-run.GfUVI3’
‘~/tmp/scratch/xvfb-run.HYEHXV’ ‘~/tmp/scratch/xvfb-run.MQsVpu’
‘~/tmp/scratch/xvfb-run.PDZQnC’ ‘~/tmp/scratch/xvfb-run.PEtGko’
‘~/tmp/scratch/xvfb-run.Pf9FLE’ ‘~/tmp/scratch/xvfb-run.TYJwOL’
‘~/tmp/scratch/xvfb-run.VAjPvy’ ‘~/tmp/scratch/xvfb-run.VItb93’
‘~/tmp/scratch/xvfb-run.Wz12WA’ ‘~/tmp/scratch/xvfb-run.aKAAyg’
‘~/tmp/scratch/xvfb-run.aQTieh’ ‘~/tmp/scratch/xvfb-run.cc4J9n’
‘~/tmp/scratch/xvfb-run.dgTpeW’ ‘~/tmp/scratch/xvfb-run.eM8PBH’
‘~/tmp/scratch/xvfb-run.haJD9d’ ‘~/tmp/scratch/xvfb-run.hiKScY’
‘~/tmp/scratch/xvfb-run.jIDyjc’ ‘~/tmp/scratch/xvfb-run.liHB0r’
‘~/tmp/scratch/xvfb-run.piGcKx’ ‘~/tmp/scratch/xvfb-run.qrLOi1’
‘~/tmp/scratch/xvfb-run.r4LNEs’ ‘~/tmp/scratch/xvfb-run.xS0JRg’
‘~/tmp/scratch/xvfb-run.xWqKe6’ ‘~/tmp/scratch/xvfb-run.zg8YB8’
‘/dev/shm/0106de91-939c-4478-bd10-6bd3dd4e63b1’
‘/dev/shm/0106de91-939c-4478-bd10-6bd3dd4e63b1_counter’
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.3.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [3s/4s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(biocharkitgui)
>
> test_check("biocharkitgui")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-report.R:41:3'): gui_render_report renders a real HTML file from a populated store ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(store, out) at test-report.R:41:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-report.R:58:3'): gui_render_report handles an entirely empty store gracefully ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─biocharkitgui::gui_render_report(empty_store, out) at test-report.R:58:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 2 | WARN 2 | SKIP 0 | PASS 58 ]
Error:
! Test failures.
Execution halted
Flavor: r-release-linux-x86_64