Last updated on 2025-01-14 01:49:19 CET.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.2.1 | 5.67 | 81.19 | 86.86 | ERROR | |
| r-devel-linux-x86_64-debian-gcc | 0.2.2 | 4.58 | 58.23 | 62.81 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 0.2.2 | 148.05 | OK | |||
| r-devel-linux-x86_64-fedora-gcc | 0.2.2 | 152.15 | OK | |||
| r-devel-windows-x86_64 | 0.2.2 | 11.00 | 106.00 | 117.00 | OK | |
| r-patched-linux-x86_64 | 0.2.1 | 5.70 | 75.09 | 80.79 | ERROR | |
| r-release-linux-x86_64 | 0.2.1 | 5.32 | 75.10 | 80.42 | ERROR | |
| r-release-macos-arm64 | 0.2.2 | 74.00 | OK | |||
| r-release-macos-x86_64 | 0.2.2 | 99.00 | ERROR | |||
| r-release-windows-x86_64 | 0.2.2 | 9.00 | 100.00 | 109.00 | OK | |
| r-oldrel-macos-arm64 | 0.2.2 | 73.00 | OK | |||
| r-oldrel-macos-x86_64 | 0.2.2 | 96.00 | ERROR | |||
| r-oldrel-windows-x86_64 | 0.2.2 | 10.00 | 115.00 | 125.00 | OK |
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [10s/13s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(datacutr)
>
> test_check("datacutr")
[1] "At least 1 patient with missing datacut date."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[ FAIL 4 | WARN 4 | SKIP 0 | PASS 55 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-process_cut.R:180:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:180:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
5. └─xfun::write_utf8(res, output)
6. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
7. └─base::file(con, "w")
── Error ('test-process_cut.R:224:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:224:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
5. └─xfun::write_utf8(res, output)
6. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
7. └─base::file(con, "w")
── Error ('test-read_out.R:79:3'): Correct .Rmd file is run successfully when fields contain correct data inputs ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::read_out(...) at test-read_out.R:79:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-read_out.R:95:3'): Correct .Rmd file is ran successfully when fields are empty ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::read_out(out_path = tempdir()) at test-read_out.R:95:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 4 | WARN 4 | SKIP 0 | PASS 55 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-clang
Version: 0.2.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [7s/10s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(datacutr)
>
> test_check("datacutr")
[1] "At least 1 patient with missing datacut date."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[ FAIL 4 | WARN 4 | SKIP 0 | PASS 55 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-process_cut.R:180:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:180:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
5. └─xfun::write_utf8(res, output)
6. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
7. └─base::file(con, "w")
── Error ('test-process_cut.R:227:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:227:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
5. └─xfun::write_utf8(res, output)
6. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
7. └─base::file(con, "w")
── Error ('test-read_out.R:81:3'): Correct .Rmd file is run successfully when fields contain correct data inputs ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::read_out(...) at test-read_out.R:81:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-read_out.R:99:3'): Correct .Rmd file is ran successfully when fields are empty ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::read_out(out_path = temp_dir) at test-read_out.R:99:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 4 | WARN 4 | SKIP 0 | PASS 55 ]
Error: Test failures
Execution halted
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 0.2.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [10s/12s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(datacutr)
>
> test_check("datacutr")
[1] "At least 1 patient with missing datacut date."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[ FAIL 4 | WARN 4 | SKIP 0 | PASS 55 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-process_cut.R:180:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:180:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
5. └─xfun::write_utf8(res, output)
6. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
7. └─base::file(con, "w")
── Error ('test-process_cut.R:224:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:224:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
5. └─xfun::write_utf8(res, output)
6. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
7. └─base::file(con, "w")
── Error ('test-read_out.R:79:3'): Correct .Rmd file is run successfully when fields contain correct data inputs ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::read_out(...) at test-read_out.R:79:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
── Error ('test-read_out.R:95:3'): Correct .Rmd file is ran successfully when fields are empty ──
Error in `file(con, "w")`: cannot open the connection
Backtrace:
▆
1. └─datacutr::read_out(out_path = tempdir()) at test-read_out.R:95:3
2. └─rmarkdown::render(...)
3. └─knitr::knit(knit_input, knit_output, envir = envir, quiet = quiet)
4. └─xfun::write_utf8(res, output)
5. └─base::writeLines(enc2utf8(text), con, ..., useBytes = TRUE)
6. └─base::file(con, "w")
[ FAIL 4 | WARN 4 | SKIP 0 | PASS 55 ]
Error: Test failures
Execution halted
Flavors: r-patched-linux-x86_64, r-release-linux-x86_64
Version: 0.2.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [5s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(testthat)
> library(datacutr)
>
> test_check("datacutr")
[1] "At least 1 patient with missing datacut date."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[1] "At least 1 patient with missing datacut date, all records will be kept."
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 55 ]
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test-process_cut.R:180:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:180:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)
5. └─rmarkdown:::stop2(paste(msg, collapse = " "))
── Error ('test-process_cut.R:227:3'): Test that Correct .Rmd file is ran successfully when read_out = TRUE ──
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Backtrace:
▆
1. └─datacutr::process_cut(...) at test-process_cut.R:227:3
2. └─datacutr::read_out(...)
3. └─rmarkdown::render(...)
4. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)
5. └─rmarkdown:::stop2(paste(msg, collapse = " "))
── Error ('test-read_out.R:81:3'): Correct .Rmd file is run successfully when fields contain correct data inputs ──
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Backtrace:
▆
1. └─datacutr::read_out(...) at test-read_out.R:81:3
2. └─rmarkdown::render(...)
3. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)
4. └─rmarkdown:::stop2(paste(msg, collapse = " "))
── Error ('test-read_out.R:99:3'): Correct .Rmd file is ran successfully when fields are empty ──
Error: pandoc version 1.12.3 or higher is required and was not found (see the help page ?rmarkdown::pandoc_available).
Backtrace:
▆
1. └─datacutr::read_out(out_path = temp_dir) at test-read_out.R:99:3
2. └─rmarkdown::render(...)
3. └─rmarkdown::pandoc_available(required_pandoc, error = TRUE)
4. └─rmarkdown:::stop2(paste(msg, collapse = " "))
[ FAIL 4 | WARN 0 | SKIP 0 | PASS 55 ]
Error: Test failures
Execution halted
Flavors: r-release-macos-x86_64, r-oldrel-macos-x86_64