Last updated on 2026-09-04 02:51:02 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.1.0 | 10.41 | 413.90 | 424.31 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.1.0 | 6.23 | 272.38 | 278.61 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.1.0 | 2.35 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 0.1.0 | 275.39 | OK | |||
| r-devel-windows-x86_64 | 0.1.0 | 12.00 | 294.00 | 306.00 | OK | |
| r-patched-linux-x86_64 | 0.1.0 | 11.21 | 383.15 | 394.36 | OK | |
| r-release-linux-x86_64 | 0.1.0 | 8.67 | 390.71 | 399.38 | OK | |
| r-release-macos-arm64 | 0.1.0 | 2.00 | 72.00 | 74.00 | OK | |
| r-release-macos-x86_64 | 0.1.0 | 8.00 | 336.00 | 344.00 | OK | |
| r-release-windows-x86_64 | 0.1.0 | 12.00 | 298.00 | 310.00 | OK | |
| r-oldrel-macos-arm64 | 0.1.0 | 2.00 | 79.00 | 81.00 | OK | |
| r-oldrel-macos-x86_64 | 0.1.0 | 7.00 | 296.00 | 303.00 | OK | |
| r-oldrel-windows-x86_64 | 0.1.0 | 16.00 | 362.00 | 378.00 | ERROR |
Version: 0.1.0
Check: package dependencies
Result: ERROR
Package required but not available: ‘duckplyr’
Package suggested but not available for checking: ‘duckdb’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.1.0
Check: examples
Result: ERROR
Running examples in 'immundata-Ex.R' failed
The error most likely occurred in:
> ### Name: read_repertoires
> ### Title: Read immune repertoire files into ImmunData
> ### Aliases: read_repertoires
>
> ### ** Examples
>
> library(immundata)
> library(dplyr)
>
> options(immundata.verbose = FALSE)
>
> # Read one bulk AIRR file and preserve its abundance column
> bulk_file <- system.file(
+ "extdata/tsv",
+ "sample_0_1k.tsv",
+ package = "immundata"
+ )
>
> bulk_idata <- read_repertoires(
+ path = bulk_file,
+ schema = c("cdr3_aa", "v_call"),
+ count_col = "counts",
+ output_folder = tempfile("immundata-bulk-")
+ )
>
> tibble(
+ n_records = bulk_idata |> count() |> pull(n),
+ n_receptors = bulk_idata$receptors |> count() |> collect() |> pull(n),
+ n_repertoires = nrow(bulk_idata$repertoires)
+ )
Warning in file(file, ifelse(append, "a", "w")) :
cannot open file 'C:\Users\CRAN\AppData\Local/R/cache/R/duckplyr/telemetry/79372.ndjson': Permission denied
Error in file(file, ifelse(append, "a", "w")) :
cannot open the connection
Calls: tibble ... arrange.data.frame -> rel_try -> tel_collect -> cat -> file
Execution halted
Flavor: r-oldrel-windows-x86_64