Last updated on 2026-07-01 03:05:01 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 2.10.0 | 5.87 | 141.35 | 147.22 | OK | |
| r-devel-linux-x86_64-debian-gcc | 2.10.0 | 4.24 | 96.58 | 100.82 | OK | |
| r-devel-linux-x86_64-fedora-clang | 2.10.0 | 11.00 | 391.49 | 402.49 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 2.10.0 | 11.00 | 412.29 | 423.29 | OK | |
| r-devel-windows-x86_64 | 2.10.0 | 11.00 | 142.00 | 153.00 | OK | |
| r-patched-linux-x86_64 | 2.9.0 | 8.39 | 142.98 | 151.37 | OK | |
| r-release-linux-x86_64 | 2.10.0 | OK | ||||
| r-release-macos-arm64 | 2.10.0 | 2.00 | 33.00 | 35.00 | OK | |
| r-release-macos-x86_64 | 2.10.0 | 5.00 | 165.00 | 170.00 | OK | |
| r-release-windows-x86_64 | 2.10.0 | 11.00 | 148.00 | 159.00 | OK | |
| r-oldrel-macos-arm64 | 2.10.0 | 1.00 | 38.00 | 39.00 | ERROR | |
| r-oldrel-macos-x86_64 | 2.10.0 | 5.00 | 133.00 | 138.00 | OK | |
| r-oldrel-windows-x86_64 | 2.10.0 | 15.00 | 172.00 | 187.00 | OK |
Version: 2.10.0
Check: tests
Result: ERROR
Running ‘testthat.R’ [13s/7s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library(loo)
This is loo version 2.10.0
- Online documentation and vignettes at mc-stan.org/loo
- As of v2.0.0 loo defaults to 1 core but we recommend using as many as possible. Use the 'cores' argument or set options(mc.cores = NUM_CORES) for an entire session.
> library(testthat)
Attaching package: 'testthat'
The following object is masked from 'package:loo':
compare
> Sys.setenv("R_TESTS" = "")
> test_check("loo")
Starting 2 test processes.
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: *** caught segfault ***
> test_loo_and_waic.R: address 0x110, cause 'invalid permissions'
> test_loo_and_waic.R:
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))})
> test_loo_and_waic.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_and_waic.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))
> test_loo_and_waic.R: 14: FUN(X[[i]], ...)
> test_loo_and_waic.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_and_waic.R: 16: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_and_waic.R: 18: importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, method = is_method)
> test_loo_and_waic.R: 19: loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 20: loo(LLarr, r_eff = r_eff_arr, cores = 2)
> test_loo_and_waic.R: 21: withCallingHandlers(expr, warning = function(w) if (inherits(w, classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R: 22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: 23: eval(code, test_env)
> test_loo_and_waic.R: 24: eval(code, test_env)
> test_loo_and_waic.R: 25: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 26: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 27: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 28: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: 34: test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: 64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025",
> test_loo_and_waic.R: Traceback:
> test_loo_and_waic.R: 1: outer(X, Y)
> test_loo_and_waic.R: 2: compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err
> test_loo_and_waic.R: -theta %o% x
> test_loo_and_waic.R: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_and_waic.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_and_waic.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_and_waic.R: 6: FUN(X[[i]], ...)
> test_loo_and_waic.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_and_waic.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e) if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) base::rm("__callr_dump__", envir = .GlobalEnv) if (!silent && isTRUE(getOption("show.error.messages"))) { } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } invisible(structure(msg, class = "try-error", condition = e))}) e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) }
> test_loo_and_waic.R: base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, interrupt = function(e) {12: {try(lapply(X = S, FUN = FUN, ...), silent = TRUE) callr_data <- base::as.environment("tools:callr")$`__callr_data__`
> test_loo_and_waic.R: err <- callr_data$err13: if (FALSE) {sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) base::assign(".Traceback", base::.traceback(4), envir = callr_data)
> test_loo_and_waic.R: utils::dump.frames("__callr_dump__")14: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, FUN(X[[i]], ...) envir = callr_data)
> test_loo_and_waic.R: base::rm("__callr_dump__", envir = .GlobalEnv)15: }lapply(seq_len(cores), inner.do) e <- err$process_call(e)
> test_loo_and_waic.R: e2 <- err$new_error("error in callr subprocess")16: class <- base::classparallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_and_waic.R: 17: class(e2) <- base::c("callr_remote_error", class(e2))do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, e2 <- err$add_trace_back(e2) method = method) cut <- base::which(e2$trace$scope == "global")[1]
> test_loo_and_waic.R: if (!base::is.na(cut)) {18: e2$trace <- e2$trace[-(1:cut), ]importance_sampling.array(log_ratios = -x, r_eff = r_eff, cores = cores, } method = is_method) if (callr_data$has_otel) {
> test_loo_and_waic.R: callr_data$otel_span$record_exception(e2)19: }loo.array(LLarr, r_eff = r_eff_arr, cores = 2) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, callr_message = function(e) {
> test_loo_and_waic.R: base::try({20: callr_data <- base::as.environment("tools:callr")$`__callr_data__`loo(LLarr, r_eff = r_eff_arr, cores = 2) pxlib <- callr_data$pxlib
> test_loo_and_waic.R: if (base::is.null(e$code)) {21: e$code <- "301"withCallingHandlers(expr, warning = function(w) if (inherits(w, } classes)) tryInvokeRestart("muffleWarning"))
> test_loo_and_waic.R: 22: suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2))
> test_loo_and_waic.R: msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, 23: NULL)))eval(code, test_env) data <- base::paste0(e$code, " ", base::nchar(msg), "\n",
> test_loo_and_waic.R: msg)24: if (callr_data$has_otel) {eval(code, test_env) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code))
> test_loo_and_waic.R: }25: pxlib$write_fd(3L, data)withCallingHandlers({ if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") eval(code, test_env) } new_expectations <- the$test_expectations > starting_expectations }) if (snapshot_skipped) {}), error = function(e) { skip("On CRAN") { } NULL else if (!new_expectations && skip_on_empty) { NULL skip_empty() } } if (FALSE) {}, expectation = handle_expectation, packageNotFoundError = function(e) { base::try(base::stop(e)) if (on_cran()) { } skip(paste0("{", e$package, "} is not installed.")) if (FALSE) { } base::q(save = "no", status = 1)}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE base::invisible() invokeRestart("muffle_cran_snapshot")}, interrupt = function(e) {}, skip = handle_skip, warning = handle_warning, message = handle_message, { error = handle_error, interrupt = handle_interrupt) NULL
> test_loo_and_waic.R: NULL26: }doTryCatch(return(expr), name, parentenv, handler) if (FALSE) {
> test_loo_and_waic.R: base::q(save = "no", status = 1)27: }tryCatchOne(expr, names, parentenv, handlers[[1L]]) base::invisible()
> test_loo_and_waic.R: })28:
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
> test_loo_and_waic.R: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 29: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 30: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 31: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 32: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 33: test_code(code, parent.frame())
> test_loo_and_waic.R: 34: test_that("loo with cores=1 and cores=2 gives same results", { loo2 <- suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) expect_equal(loo1$estimates, loo2$estimates) })
> test_loo_and_waic.R: 35: eval(code, test_env)
> test_loo_and_waic.R: 36: eval(code, test_env)
> test_loo_and_waic.R: 37: withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
> test_loo_and_waic.R: if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_and_waic.R: 38: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 39: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 41: tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_and_waic.R: 42: doWithOneRestart(return(expr), restart)
> test_loo_and_waic.R: 43: withOneRestart(expr, restarts[[1L]])
> test_loo_and_waic.R: 44: withRestarts(tryCatch(withCallingHandlers({ eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) { if (on_cran()) { skip(paste0("{", e$package, "} is not installed.")) }}, snapshot_on_cran = function(cnd) { snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_and_waic.R: 45: test_code(code = exprs, env = env, reporter = get_reporter() %||% StopReporter$new())
> test_loo_and_waic.R: 46: source_file(path, env = env(env), desc = desc, shuffle = shuffle, error_call = error_call)
> test_loo_and_waic.R: 47: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_and_waic.R: 48: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 49: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 50: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 51: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n") NULL})
> test_loo_and_waic.R: 52: with_reporter(multi, test_one_file(path, env = the$testing_env, shuffle = shuffle))
> test_loo_and_waic.R: 53: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_and_waic.R: 54: (function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_and_waic.R"), base::quote(FALSE))
> test_loo_and_waic.R: 55: (function (what, args, quote = FALSE, envir = parent.frame()) { if (!is.list(args)) stop("second argument must be a list") if (quote) args <- lapply(args, enquote) .Internal(do.call(what, args, envir))})(base::quote(function (path, shuffle) { asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_and_waic.R", FALSE)), envir = base::quote(<environment>), quote = base::quote(TRUE))
> test_loo_and_waic.R: 56: base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_and_waic.R: 57: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", compress = FALSE)
> test_loo_and_waic.R: 58: base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })})
> test_loo_and_waic.R: 59: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 60: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_and_waic.R: 61: tryCatchList(expr, names[-nh], parentenv, handlers[-nh])
> test_loo_and_waic.R: 62: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_and_waic.R: 63: tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), names[nh], parentenv, handlers[[nh]])
> test_loo_and_waic.R: 64: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_and_waic.R: 65: base::tryCatch(base::withCallingHandlers({ { NULL NULL } base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa5810b076"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv,
> test_loo_and_waic.R: quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", compress = FALSE) base::flush(base::stdout()) base::flush(base::stderr()) { NULL NULL } base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::assign(".Traceback", base::.traceback(4), envir = callr_data) utils::dump.frames("__callr_dump__") base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, envir = callr_data) base::rm("__callr_dump__", envir = .GlobalEnv) } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa2fb14025", ".error")) }}, callr_message = function(e) { base::try({ callr_data <- base::as.environment("tools:callr")$`__callr_data__` pxlib <- callr_data$pxlib if (base::is.null(e$code)) { e$code <- "301" } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, NULL))) data <- base::paste0(e$code, " ", base::nchar(msg), "\n", msg) if (callr_data$has_otel) { callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") } })}), error = function(e) { { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_and_waic.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_and_waic-30.R
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: *** caught segfault ***
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R: address 0x110, cause 'invalid permissions'
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: Traceback:
> test_loo_predictive_metric.R: 1: 1: outer(X, Y)outer(X, Y)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 2: 2: -theta %o% x-theta %o% x
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 3: 3: posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)posterior::gpdfit(exp(x) - exp_cutoff, sort_x = FALSE)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: lapply(X = S, FUN = FUN, ...)
> test_loo_predictive_metric.R: 4: psis_smooth_tail(lw_tail, cutoff)
> test_loo_predictive_metric.R: 5: is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i])
> test_loo_predictive_metric.R: 6: FUN(X[[i]], ...)
> test_loo_predictive_metric.R: 7: 8: lapply(X = S, FUN = FUN, ...)doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10:
> test_loo_predictive_metric.R: 8: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 9: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 10: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 11: tryCatch(expr, error = function(e) { call <- conditionCall(e)tryCatchList(expr, classes, parentenv, handlers) if (!is.null(call)) {
> test_loo_predictive_metric.R: if (identical(call[[1L]], quote(doTryCatch))) 11: call <- sys.call(-4L)tryCatch(expr, error = function(e) { dcall <- deparse(call, nlines = 1L) prefix <- paste("Error in", dcall, ": ") LONG <- 75L sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], call <- conditionCall(e) type = "b") if (!is.null(call)) { if (identical(call[[1L]], quote(doTryCatch))) call <- sys.call(-4L) dcall <- deparse(call, nlines = 1L) if (w > LONG) prefix <- paste("Error in", dcall, ": ") prefix <- paste0(prefix, "\n ") LONG <- 75L } else prefix <- "Error : " msg <- paste0(prefix, conditionMessage(e), "\n") .Internal(seterrmessage(msg[1L])) sm <- strsplit(conditionMessage(e), "\n")[[1L]] w <- 14L + nchar(dcall, type = "w") + nchar(sm[1L], type = "w") if (is.na(w)) w <- 14L + nchar(dcall, type = "b") + nchar(sm[1L], if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile) .Internal(printDeferredWarnings()) } type = "b") if (w > LONG) prefix <- paste0(prefix, "\n ") } invisible(structure(msg, class = "try-error", condition = e)) else prefix <- "Error : "}) msg <- paste0(prefix, conditionMessage(e), "\n")
> test_loo_predictive_metric.R: .Internal(seterrmessage(msg[1L])) if (!silent && isTRUE(getOption("show.error.messages"))) { cat(msg, file = outFile)12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R: 13: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE)) .Internal(printDeferredWarnings())
> test_loo_predictive_metric.R: }14: invisible(structure(msg, class = "try-error", condition = e))FUN(X[[i]], ...)})
> test_loo_predictive_metric.R: 12: try(lapply(X = S, FUN = FUN, ...), silent = TRUE)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 15: lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R: 16: 13: parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: sendMaster(try(lapply(X = S, FUN = FUN, ...), silent = TRUE))do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores,
> test_loo_predictive_metric.R: method = method)14:
> test_loo_predictive_metric.R: FUN(X[[i]], ...)18:
> test_loo_predictive_metric.R: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores, 15: method = "psis")lapply(seq_len(cores), inner.do)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 19: 16: psis.matrix(-LL, r_eff = r_eff, cores = 2)parallel::mclapply(X = seq_len(N), mc.cores = cores, FUN = function(i) is_fun(log_ratios_i = log_ratios[, i], tail_len_i = tail_len[i]))
> test_loo_predictive_metric.R: 17: do_importance_sampling(log_ratios, r_eff = r_eff, cores = cores, method = method)
> test_loo_predictive_metric.R: 18: importance_sampling.matrix(log_ratios, ..., r_eff = r_eff, cores = cores,
> test_loo_predictive_metric.R: method = "psis")20:
> test_loo_predictive_metric.R: psis(-LL, r_eff = r_eff, cores = 2)19:
> test_loo_predictive_metric.R: psis.matrix(-LL, r_eff = r_eff, cores = 2)21:
> test_loo_predictive_metric.R: eval(code, test_env)20:
> test_loo_predictive_metric.R: psis(-LL, r_eff = r_eff, cores = 2)22:
> test_loo_predictive_metric.R: eval(code, test_env)21:
> test_loo_predictive_metric.R: eval(code, test_env)23:
> test_loo_predictive_metric.R: withCallingHandlers({22: eval(code, test_env)eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations
> test_loo_predictive_metric.R: if (snapshot_skipped) {23: skip("On CRAN")withCallingHandlers({ } eval(code, test_env) else if (!new_expectations && skip_on_empty) { new_expectations <- the$test_expectations > starting_expectations skip_empty() if (snapshot_skipped) { } skip("On CRAN")}, expectation = handle_expectation, packageNotFoundError = function(e) { } if (on_cran()) { else if (!new_expectations && skip_on_empty) { skip(paste0("{", e$package, "} is not installed.")) skip_empty() } }}, snapshot_on_cran = function(cnd) {}, expectation = handle_expectation, packageNotFoundError = function(e) { snapshot_skipped <<- TRUE if (on_cran()) { invokeRestart("muffle_cran_snapshot") skip(paste0("{", e$package, "} is not installed."))}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt)}, snapshot_on_cran = function(cnd) {
> test_loo_predictive_metric.R: snapshot_skipped <<- TRUE invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt)
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 25: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 26: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 27: tryCatch(withCallingHandlers({
> test_loo_predictive_metric.R: 24: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") } else if (!new_expectations && skip_on_empty) { skip_empty() }}, expectation = handle_expectation, packageNotFoundError = function(e) {25: if (on_cran()) {tryCatchOne(expr, names, parentenv, handlers[[1L]]) skip(paste0("{", e$package, "} is not installed."))
> test_loo_predictive_metric.R: }26: }, snapshot_on_cran = function(cnd) {tryCatchList(expr, classes, parentenv, handlers) snapshot_skipped <<- TRUE
> test_loo_predictive_metric.R: invokeRestart("muffle_cran_snapshot")27: }, skip = handle_skip, warning = handle_warning, message = handle_message, tryCatch(withCallingHandlers({ error = handle_error, interrupt = handle_interrupt), error = handle_fatal) eval(code, test_env) new_expectations <- the$test_expectations > starting_expectations if (snapshot_skipped) { skip("On CRAN") }
> test_loo_predictive_metric.R: else if (!new_expectations && skip_on_empty) {28: skip_empty()doWithOneRestart(return(expr), restart) }
> test_loo_predictive_metric.R: }, expectation = handle_expectation, packageNotFoundError = function(e) {29: if (on_cran()) {withOneRestart(expr, restarts[[1L]]) skip(paste0("{", e$package, "} is not installed."))
> test_loo_predictive_metric.R: }30: }, snapshot_on_cran = function(cnd) {withRestarts(tryCatch(withCallingHandlers({ snapshot_skipped <<- TRUE eval(code, test_env) invokeRestart("muffle_cran_snapshot")}, skip = handle_skip, warning = handle_warning, message = handle_message, error = handle_error, interrupt = handle_interrupt), error = handle_fatal)
> test_loo_predictive_metric.R: 28: new_expectations <- the$test_expectations > starting_expectationsdoWithOneRestart(return(expr), restart) if (snapshot_skipped) {
> test_loo_predictive_metric.R: skip("On CRAN")29: }withOneRestart(expr, restarts[[1L]]) else if (!new_expectations && skip_on_empty) {
> test_loo_predictive_metric.R: skip_empty()30: }withRestarts(tryCatch(withCallingHandlers({}, expectation = handle_expectation, packageNotFoundError = function(e) { eval(code, test_env) if (on_cran()) { new_expectations <- the$test_expectations > starting_expectations skip(paste0("{", e$package, "} is not installed.")) if (snapshot_skipped) { } skip("On CRAN")}, snapshot_on_cran = function(cnd) { } snapshot_skipped <<- TRUE else if (!new_expectations && skip_on_empty) { invokeRestart("muffle_cran_snapshot") skip_empty()}, skip = handle_skip, warning = handle_warning, message = handle_message, } error = handle_error, interrupt = handle_interrupt), error = handle_fatal), end_test = function() { })
> test_loo_predictive_metric.R: 31: }, expectation = handle_expectation, packageNotFoundError = function(e) {test_code(code = exprs, env = env, reporter = get_reporter() %||% if (on_cran()) { StopReporter$new()) skip(paste0("{", e$package, "} is not installed."))
> test_loo_predictive_metric.R: }32: }, snapshot_on_cran = function(cnd) {source_file(path, env = env(env), desc = desc, shuffle = shuffle, snapshot_skipped <<- TRUE error_call = error_call) invokeRestart("muffle_cran_snapshot")
> test_loo_predictive_metric.R: }, skip = handle_skip, warning = handle_warning, message = handle_message, 33: error = handle_error, interrupt = handle_interrupt), error = handle_fatal), test_one_file(path, env = the$testing_env, shuffle = shuffle) end_test = function() { })
> test_loo_predictive_metric.R: 31: test_code(code = exprs, env = env, reporter = get_reporter() %||%
> test_loo_predictive_metric.R: 34: doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R: 35: StopReporter$new())tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 32: 36: source_file(path, env = env(env), desc = desc, shuffle = shuffle, tryCatchList(expr, classes, parentenv, handlers) error_call = error_call)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n")
> test_loo_predictive_metric.R: 33: test_one_file(path, env = the$testing_env, shuffle = shuffle)
> test_loo_predictive_metric.R: 34: NULL})
> test_loo_predictive_metric.R: 38: with_reporter(multi, test_one_file(path, env = the$testing_env, doTryCatch(return(expr), name, parentenv, handler) shuffle = shuffle))
> test_loo_predictive_metric.R: 35: tryCatchOne(expr, names, parentenv, handlers[[1L]])
> test_loo_predictive_metric.R: 36:
> test_loo_predictive_metric.R: 39: asNamespace("testthat")$queue_task(path, shuffle)
> test_loo_predictive_metric.R: 40: tryCatchList(expr, classes, parentenv, handlers)
> test_loo_predictive_metric.R: 37: tryCatch(code, testthat_abort_reporter = function(cnd) { cat(conditionMessage(cnd), "\n")(function (path, shuffle) NULL{ asNamespace("testthat")$queue_task(path, shuffle)})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE))
> test_loo_predictive_metric.R: 41: })(function (what, args, quote = FALSE, envir = parent.frame())
> test_loo_predictive_metric.R: { if (!is.list(args)) stop("second argument must be a list") if (quote) 38: args <- lapply(args, enquote)with_reporter(multi, test_one_file(path, env = the$testing_env, .Internal(do.call(what, args, envir)) shuffle = shuffle))})(base::quote(function (path, shuffle)
> test_loo_predictive_metric.R: {39: asNamespace("testthat")$queue_task(path, shuffle)asNamespace("testthat")$queue_task(path, shuffle)}), base::quote(list("test_loo_predictive_metric.R", FALSE)),
> test_loo_predictive_metric.R: envir = base::quote(<environment>), quote = base::quote(TRUE))40:
> test_loo_predictive_metric.R: (function (path, shuffle) 42: {base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE)
> test_loo_predictive_metric.R: 43: asNamespace("testthat")$queue_task(path, shuffle)base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", compress = FALSE)
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ { NULL})(base::quote("test_loo_predictive_metric.R"), base::quote(FALSE)) NULL
> test_loo_predictive_metric.R: }41: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), (function (what, args, quote = FALSE, envir = parent.frame()) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, { quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", if (!is.list(args)) compress = FALSE) stop("second argument must be a list") base::flush(base::stdout()) if (quote) base::flush(base::stderr()) args <- lapply(args, enquote) { .Internal(do.call(what, args, envir)) NULL})(base::quote(function (path, shuffle) NULL{ } asNamespace("testthat")$queue_task(path, shuffle) base::invisible()}), base::quote(list("test_loo_predictive_metric.R", FALSE)), }, error = function(e) { envir = base::quote(<environment>), quote = base::quote(TRUE)) {
> test_loo_predictive_metric.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__`42: err <- callr_data$errbase::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), if (FALSE) { base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, base::assign(".Traceback", base::.traceback(4), envir = callr_data) quote = TRUE) utils::dump.frames("__callr_dump__")
> test_loo_predictive_metric.R: base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, 43: envir = callr_data)base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), base::rm("__callr_dump__", envir = .GlobalEnv) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, } quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", compress = FALSE)
> test_loo_predictive_metric.R: 44: base::withCallingHandlers({ e <- err$process_call(e) { e2 <- err$new_error("error in callr subprocess") NULL class <- base::class NULL class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) {
> test_loo_predictive_metric.R: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), e2$trace <- e2$trace[-(1:cut), ] base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", } compress = FALSE) if (callr_data$has_otel) { base::flush(base::stdout()) callr_data$otel_span$record_exception(e2) base::flush(base::stderr()) } { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", NULL ".error")) NULL } }}, interrupt = function(e) { base::invisible() {}, error = function(e) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` { err <- callr_data$err callr_data <- base::as.environment("tools:callr")$`__callr_data__` if (FALSE) { err <- callr_data$err base::assign(".Traceback", base::.traceback(4), envir = callr_data) if (FALSE) { utils::dump.frames("__callr_dump__") base::assign(".Traceback", base::.traceback(4), envir = callr_data) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, utils::dump.frames("__callr_dump__") envir = callr_data) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::rm("__callr_dump__", envir = .GlobalEnv) envir = callr_data) } base::rm("__callr_dump__", envir = .GlobalEnv) e <- err$process_call(e) } e2 <- err$new_error("error in callr subprocess") e <- err$process_call(e) class <- base::class e2 <- err$new_error("error in callr subprocess") class(e2) <- base::c("callr_remote_error", class(e2)) class <- base::class e2 <- err$add_trace_back(e2) class(e2) <- base::c("callr_remote_error", class(e2)) cut <- base::which(e2$trace$scope == "global")[1] e2 <- err$add_trace_back(e2) if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } if (callr_data$has_otel) { callr_data$otel_span$record_exception(e2) } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", ".error")) }}, callr_message = function(e) { ".error")) base::try({ } callr_data <- base::as.environment("tools:callr")$`__callr_data__`}, interrupt = function(e) { pxlib <- callr_data$pxlib { if (base::is.null(e$code)) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` e$code <- "301" err <- callr_data$err } if (FALSE) { msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, base::assign(".Traceback", base::.traceback(4), envir = callr_data) NULL))) utils::dump.frames("__callr_dump__") data <- base::paste0(e$code, " ", base::nchar(msg), "\n", base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, msg) envir = callr_data) if (callr_data$has_otel) { base::rm("__callr_dump__", envir = .GlobalEnv) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } } e <- err$process_call(e) pxlib$write_fd(3L, data) e2 <- err$new_error("error in callr subprocess") if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { class <- base::class base::invokeRestart("cli_message_handled") class(e2) <- base::c("callr_remote_error", class(e2)) } e2 <- err$add_trace_back(e2) else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { cut <- base::which(e2$trace$scope == "global")[1] base::invokeRestart("muffleMessage") if (!base::is.na(cut)) { } e2$trace <- e2$trace[-(1:cut), ] }) }}) if (callr_data$has_otel) {
> test_loo_predictive_metric.R: callr_data$otel_span$record_exception(e2)45: }doTryCatch(return(expr), name, parentenv, handler) base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", ".error")) }}, callr_message = function(e) { base::try({
> test_loo_predictive_metric.R: callr_data <- base::as.environment("tools:callr")$`__callr_data__`46: pxlib <- callr_data$pxlibtryCatchOne(expr, names, parentenv, handlers[[1L]]) if (base::is.null(e$code)) {
> test_loo_predictive_metric.R: e$code <- "301"47: }tryCatchList(expr, names[-nh], parentenv, handlers[-nh]) msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e,
> test_loo_predictive_metric.R: NULL)))48: data <- base::paste0(e$code, " ", base::nchar(msg), "\n", doTryCatch(return(expr), name, parentenv, handler) msg)
> test_loo_predictive_metric.R: if (callr_data$has_otel) {49: callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") } else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { base::invokeRestart("muffleMessage") }tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), }) names[nh], parentenv, handlers[[nh]])})
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 50: 45: tryCatchList(expr, classes, parentenv, handlers)doTryCatch(return(expr), name, parentenv, handler)
> test_loo_predictive_metric.R:
> test_loo_predictive_metric.R: 51: 46: base::tryCatch(base::withCallingHandlers({tryCatchOne(expr, names, parentenv, handlers[[1L]]) {
> test_loo_predictive_metric.R: NULL47: NULLtryCatchList(expr, names[-nh], parentenv, handlers[-nh]) }
> test_loo_predictive_metric.R: base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), 48: base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, doTryCatch(return(expr), name, parentenv, handler) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3",
> test_loo_predictive_metric.R: compress = FALSE)49: base::flush(base::stdout())tryCatchOne(tryCatchList(expr, names[-nh], parentenv, handlers[-nh]), base::flush(base::stderr()) names[nh], parentenv, handlers[[nh]]) {
> test_loo_predictive_metric.R: NULL50: NULLtryCatchList(expr, classes, parentenv, handlers) }
> test_loo_predictive_metric.R: base::invisible()}, error = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err51: if (FALSE) {base::tryCatch(base::withCallingHandlers({ base::assign(".Traceback", base::.traceback(4), envir = callr_data) { utils::dump.frames("__callr_dump__") NULL base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, NULL envir = callr_data) } base::rm("__callr_dump__", envir = .GlobalEnv) base::saveRDS(base::do.call(base::do.call, base::c(base::readRDS("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-fun-141fa215ab618"), } e <- err$process_call(e) e2 <- err$new_error("error in callr subprocess") class <- base::class class(e2) <- base::c("callr_remote_error", class(e2)) base::list(envir = .GlobalEnv, quote = TRUE)), envir = .GlobalEnv, e2 <- err$add_trace_back(e2) quote = TRUE), file = "/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", compress = FALSE) base::flush(base::stdout())
> test_loo_predictive_metric.R: base::flush(base::stderr()) { cut <- base::which(e2$trace$scope == "global")[1] if (!base::is.na(cut)) { e2$trace <- e2$trace[-(1:cut), ] } NULL if (callr_data$has_otel) { NULL callr_data$otel_span$record_exception(e2) } } base::invisible() base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", }, error = function(e) { ".error")) { } callr_data <- base::as.environment("tools:callr")$`__callr_data__`}, interrupt = function(e) { err <- callr_data$err { if (FALSE) { callr_data <- base::as.environment("tools:callr")$`__callr_data__` base::assign(".Traceback", base::.traceback(4), envir = callr_data) err <- callr_data$err utils::dump.frames("__callr_dump__") if (FALSE) { base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, base::assign(".Traceback", base::.traceback(4), envir = callr_data) envir = callr_data) utils::dump.frames("__callr_dump__") base::rm("__callr_dump__", envir = .GlobalEnv) base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, } envir = callr_data) e <- err$process_call(e) base::rm("__callr_dump__", envir = .GlobalEnv) e2 <- err$new_error("error in callr subprocess") } class <- base::class e <- err$process_call(e) class(e2) <- base::c("callr_remote_error", class(e2)) e2 <- err$new_error("error in callr subprocess") e2 <- err$add_trace_back(e2) class <- base::class cut <- base::which(e2$trace$scope == "global")[1] class(e2) <- base::c("callr_remote_error", class(e2)) if (!base::is.na(cut)) { e2 <- err$add_trace_back(e2) e2$trace <- e2$trace[-(1:cut), ] cut <- base::which(e2$trace$scope == "global")[1] } if (!base::is.na(cut)) { if (callr_data$has_otel) { e2$trace <- e2$trace[-(1:cut), ] callr_data$otel_span$record_exception(e2) } } if (callr_data$has_otel) { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", callr_data$otel_span$record_exception(e2) ".error")) } } base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", ".error")) }}, callr_message = function(e) {}, interrupt = function(e) { { callr_data <- base::as.environment("tools:callr")$`__callr_data__` err <- callr_data$err if (FALSE) { base::try({ base::assign(".Traceback", base::.traceback(4), envir = callr_data) callr_data <- base::as.environment("tools:callr")$`__callr_data__` utils::dump.frames("__callr_dump__") pxlib <- callr_data$pxlib base::assign(".Last.dump", .GlobalEnv$`__callr_dump__`, if (base::is.null(e$code)) { envir = callr_data) e$code <- "301" base::rm("__callr_dump__", envir = .GlobalEnv) } } msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, e <- err$process_call(e) NULL))) e2 <- err$new_error("error in callr subprocess") data <- base::paste0(e$code, " ", base::nchar(msg), "\n", class <- base::class msg) class(e2) <- base::c("callr_remote_error", class(e2)) if (callr_data$has_otel) { e2 <- err$add_trace_back(e2) callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") cut <- base::which(e2$trace$scope == "global")[1] } if (!base::is.na(cut)) { else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { e2$trace <- e2$trace[-(1:cut), ] base::invokeRestart("muffleMessage") } } if (callr_data$has_otel) { }) callr_data$otel_span$record_exception(e2)}), error = function(e) { } { base::saveRDS(base::list("error", e2, e), file = base::paste0("/Volumes/Temp/tmp/Rtmpg6ceHo/callr-rs-result-141fa4a68f2c3", NULL ".error")) NULL } }}, callr_message = function(e) { if (FALSE) { base::try({ base::try(base::stop(e)) callr_data <- base::as.environment("tools:callr")$`__callr_data__` } pxlib <- callr_data$pxlib if (FALSE) { if (base::is.null(e$code)) { base::q(save = "no", status = 1) e$code <- "301" } } base::invisible() msg <- base::paste0("base64::", pxlib$base64_encode(base::serialize(e, }, interrupt = function(e) { NULL))) { data <- base::paste0(e$code, " ", base::nchar(msg), "\n", NULL msg) NULL if (callr_data$has_otel) { } callr_data$otel_span$add_event("callr message", attributes = list(status_code = e$code)) } pxlib$write_fd(3L, data) if (base::inherits(e, "cli_message") && !base::is.null(base::findRestart("cli_message_handled"))) { base::invokeRestart("cli_message_handled") if (FALSE) { } base::q(save = "no", status = 1) else if (base::inherits(e, "message") && !base::is.null(base::findRestart("muffleMessage"))) { } base::invokeRestart("muffleMessage") base::invisible() }}) })
> test_loo_predictive_metric.R: }), error = function(e) {An irrecoverable exception occurred. R is aborting now ...
> test_loo_predictive_metric.R: { NULL NULL } if (FALSE) { base::try(base::stop(e)) } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()}, interrupt = function(e) { { NULL NULL } if (FALSE) { base::q(save = "no", status = 1) } base::invisible()})
> test_loo_predictive_metric.R: An irrecoverable exception occurred. R is aborting now ...
Saving _problems/test_loo_predictive_metric-4.R
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
══ Skipped tests (34) ══════════════════════════════════════════════════════════
• On CRAN (32): 'test_loo_subsampling_cases.R:4:3',
'test_loo_subsampling_cases.R:256:3', 'test_E_loo.R:134:1',
'test_E_loo.R:142:1', 'test_compare.R:91:1', 'test_compare.R:122:1',
'test_compare.R:160:1', 'test_crps.R:27:1',
'test_deprecated_extractors.R:8:1', 'test_deprecated_extractors.R:106:1',
'test_gpdfit.R:1:1', 'test_kfold_helpers.R:139:1',
'test_loo_and_waic.R:23:1', 'test_loo_moment_matching.R:157:1',
'test_loo_moment_matching.R:247:1', 'test_loo_moment_matching.R:365:1',
'test_model_weighting.R:69:1', 'test_print_plot.R:41:1',
'test_print_plot.R:45:1', 'test_print_plot.R:151:1',
'test_print_plot.R:169:1', 'test_print_plot.R:175:1',
'test_print_plot.R:181:1', 'test_psis.R:13:1', 'test_psis.R:39:1',
'test_psislw.R:15:1', 'test_relative_eff.R:7:1', 'test_relative_eff.R:43:3',
'test_loo_subsampling.R:896:3', 'test_loo_subsampling.R:1077:3',
'test_tisis.R:76:1', 'test_tisis.R:213:1'
• Sys.info()[["sysname"]] == "Darwin" && R.version$arch == "aarch64" is TRUE
(2): 'test_loo_moment_matching.R:468:3', 'test_psis.R:157:3'
══ Failed tests ════════════════════════════════════════════════════════════════
── Error ('test_loo_and_waic.R:30:3'): loo with cores=1 and cores=2 gives same results ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─base::suppressWarnings(loo(LLarr, r_eff = r_eff_arr, cores = 2)) at test_loo_and_waic.R:30:3
2. │ └─base::withCallingHandlers(...)
3. ├─loo::loo(LLarr, r_eff = r_eff_arr, cores = 2)
4. └─loo::loo.array(LLarr, r_eff = r_eff_arr, cores = 2)
5. └─loo:::importance_sampling.array(...)
6. └─loo:::do_importance_sampling(...)
7. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
8. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
── Error ('test_loo_predictive_metric.R:4:1'): (code run outside of `test_that()`) ──
Error in `vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)`: values must be length 1000,
but FUN(X[[1]]) result is length 0
Backtrace:
▆
1. ├─loo::psis(-LL, r_eff = r_eff, cores = 2) at test_loo_predictive_metric.R:4:1
2. └─loo:::psis.matrix(-LL, r_eff = r_eff, cores = 2)
3. └─loo:::importance_sampling.matrix(...)
4. └─loo:::do_importance_sampling(...)
5. └─loo:::psis_apply(lw_list, "log_weights", fun_val = numeric(S))
6. └─base::vapply(x, FUN = match.arg(fun), FUN.VALUE = fun_val, item)
[ FAIL 2 | WARN 1 | SKIP 34 | PASS 847 ]
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64