Last updated on 2026-10-05 01:52:22 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 0.3.1 | 5.63 | 485.74 | 491.37 | OK | |
| r-devel-linux-x86_64-debian-gcc | 0.3.2 | 4.33 | 351.33 | 355.66 | OK | |
| r-devel-linux-x86_64-fedora-clang | 0.3.2 | 5.00 | 365.46 | 370.46 | ERROR | |
| r-devel-linux-x86_64-fedora-gcc | 0.3.2 | 387.77 | ERROR | |||
| r-devel-windows-x86_64 | 0.3.1 | 10.00 | 366.00 | 376.00 | OK | |
| r-patched-linux-x86_64 | 0.3.1 | 5.65 | 420.70 | 426.35 | OK | |
| r-release-linux-x86_64 | 0.3.2 | OK | ||||
| r-release-macos-arm64 | 0.3.1 | 1.00 | 149.00 | 150.00 | ERROR | |
| r-release-macos-x86_64 | 0.3.2 | 4.00 | 517.00 | 521.00 | ERROR | |
| r-release-windows-x86_64 | 0.3.1 | 10.00 | 339.00 | 349.00 | OK | |
| r-oldrel-macos-arm64 | 0.3.1 | 2.00 | 206.00 | 208.00 | ERROR | |
| r-oldrel-macos-x86_64 | 0.3.2 | 4.00 | 503.00 | 507.00 | ERROR | |
| r-oldrel-windows-x86_64 | 0.3.2 | 9.00 | 293.00 | 302.00 | OK |
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [326s/465s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (pkgcheck)
>
> options (repos = c (
+ ropenscireviewtools = "https://ropensci-review-tools.r-universe.dev",
+ CRAN = "https://cloud.r-project.org"
+ ))
>
> test_check ("pkgcheck")
processing file: file181c735f10dc21.Rmd
output file: file181c735f10dc21.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS file181c735f10dc21.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c735f10dc21.html --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-clang/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/rmarkdown-str181c7325297717.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c735f10dc21.html
-- Preparing goodpractice for cachecheckpkg ------------------------------------
i Preparing: description
v Preparing: description [54ms]
i Preparing: code_structure
v Preparing: code_structure [34ms]
i Preparing: namespace
v Preparing: namespace [17ms]
i Preparing: package_structure
v Preparing: package_structure [13ms]
i Preparing: rd
v Preparing: rd [14ms]
i Preparing: revdep
v Preparing: revdep [1.3s]
i Preparing: roxygen2
v Preparing: roxygen2 [106ms]
i Preparing: spelling
v Preparing: spelling [11ms]
i Preparing: urlchecker
i Package cachecheckpkg
i Preparing: urlchecker
v Preparing: urlchecker [599ms]
i Preparing: vignette
v Preparing: vignette [20ms]
-- Preparing goodpractice for cachecheckpkg ------------------------------------
-- Preparing goodpractice for pkgstats -----------------------------------------
i Preparing: description
v Preparing: description [40ms]
i Preparing: code_structure
v Preparing: code_structure [23ms]
i Preparing: namespace
v Preparing: namespace [32ms]
i Preparing: package_structure
v Preparing: package_structure [20ms]
i Preparing: rd
v Preparing: rd [73ms]
i Preparing: revdep
v Preparing: revdep [1.2s]
i Preparing: roxygen2
v Preparing: roxygen2 [1.7s]
i Preparing: spelling
v Preparing: spelling [36ms]
i Preparing: urlchecker
i Package pkgstats
i Preparing: urlchecker
i Checking that VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v Preparing: urlchecker [1.8s]
i Preparing: vignette
v Preparing: vignette [43ms]
Saving _problems/test-check-ci-13.R
Saving _problems/test-check-ci-17.R
Saving _problems/test-check-ci-18.R
Saving _problems/test-check-ci-19.R
Saving _problems/test-check-ci-20.R
processing file: file181c7332fd9dfe.Rmd
output file: file181c7332fd9dfe.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS file181c7332fd9dfe.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c7332fd9dfe.html --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-clang/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/rmarkdown-str181c7349e1d7d3.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c7332fd9dfe.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Excluding checks that depend on: "cyclocomp", "description", "lintr", "namespace", "rcmdcheck", "rd", "revdep", "roxygen2", "code_structure", "package_structure", "spelling", "tidyverse", "urlchecker", and "vignette"
i Preparing: covr
v Preparing: covr [19.6s]
processing file: file181c73dca11f4.Rmd
output file: file181c73dca11f4.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS file181c73dca11f4.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c73dca11f4.html --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-clang/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/rmarkdown-str181c731405ea03.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c73dca11f4.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [104ms]
i Preparing: code_structure
v Preparing: code_structure [23ms]
i Preparing: namespace
v Preparing: namespace [25ms]
i Preparing: covr
v Preparing: covr [21s]
i Preparing: cyclocomp
v Preparing: cyclocomp [25.9s]
i Preparing: package_structure
v Preparing: package_structure [34ms]
i Preparing: lintr
v Preparing: lintr [1.2s]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [56.7s]
i Preparing: rd
v Preparing: rd [61ms]
i Preparing: revdep
v Preparing: revdep [1.2s]
i Preparing: roxygen2
v Preparing: roxygen2 [149ms]
i Preparing: spelling
v Preparing: spelling [25ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [711ms]
i Preparing: vignette
v Preparing: vignette [23ms]
processing file: file181c73631dc3cb.Rmd
output file: file181c73631dc3cb.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS file181c73631dc3cb.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c73631dc3cb.html --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-clang/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/rmarkdown-str181c7316c72876.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c73631dc3cb.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [35ms]
i Preparing: code_structure
v Preparing: code_structure [11ms]
i Preparing: namespace
v Preparing: namespace [12ms]
i Preparing: covr
v Preparing: covr [12.6s]
i Preparing: cyclocomp
v Preparing: cyclocomp [13.7s]
i Preparing: package_structure
v Preparing: package_structure [31ms]
i Preparing: lintr
v Preparing: lintr [831ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [44.8s]
i Preparing: rd
v Preparing: rd [36ms]
i Preparing: revdep
v Preparing: revdep [1.5s]
i Preparing: roxygen2
v Preparing: roxygen2 [177ms]
i Preparing: spelling
v Preparing: spelling [20ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [524ms]
i Preparing: vignette
v Preparing: vignette [18ms]
processing file: file181c73625d6d3b.Rmd
output file: file181c73625d6d3b.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS file181c73625d6d3b.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c73625d6d3b.html --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-clang/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/rmarkdown-str181c737170092.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c73625d6d3b.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [37ms]
i Preparing: code_structure
v Preparing: code_structure [17ms]
i Preparing: namespace
v Preparing: namespace [21ms]
i Preparing: package_structure
v Preparing: package_structure [75ms]
i Preparing: rd
v Preparing: rd [20ms]
i Preparing: revdep
v Preparing: revdep [553ms]
i Preparing: roxygen2
v Preparing: roxygen2 [59ms]
i Preparing: spelling
v Preparing: spelling [47ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [394ms]
i Preparing: vignette
v Preparing: vignette [11ms]
processing file: file181c731f7dffb1.Rmd
output file: file181c731f7dffb1.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS file181c731f7dffb1.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c731f7dffb1.html --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-clang/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/rmarkdown-str181c732fb89423.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c731f7dffb1.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [18ms]
i Preparing: code_structure
v Preparing: code_structure [11ms]
i Preparing: namespace
v Preparing: namespace [45ms]
i Preparing: package_structure
v Preparing: package_structure [11ms]
i Preparing: rd
v Preparing: rd [16ms]
i Preparing: revdep
v Preparing: revdep [484ms]
i Preparing: roxygen2
v Preparing: roxygen2 [61ms]
i Preparing: spelling
v Preparing: spelling [11ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [523ms]
i Preparing: vignette
v Preparing: vignette [21ms]
i Loading cached pkgstats results from '/tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/pkgcheck/pkgstats_results/testpkgnogp_2026-10-02-20:03:57.731819'
i Loading cached goodpractice results from '/tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/pkgcheck/gp_reports/testpkgnogp_2026-10-02-20:03:57.731819'
i To re-generate, call 'pkgcheck' function with 'use_cache = FALSE', or delete the cached files.
v File 'pkgcheck.yaml' succesfully writen to '/tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/pkgcheck181c7356331b6f/.github'!
v File 'with_inputs.yaml' succesfully writen to '/tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/pkgcheck181c7356331b6f/.github'!
1. pkgchk_branch_is_master
2. pkgchk_ci_badges
3. pkgchk_fns_have_exs
4. pkgchk_fns_have_return_vals
5. pkgchk_has_bugs
6. pkgchk_has_citation
7. pkgchk_has_contrib_md
8. pkgchk_has_orcid
9. pkgchk_has_ror
10. pkgchk_has_scrap
11. pkgchk_has_url
12. pkgchk_has_vignette
13. pkgchk_left_assign
14. pkgchk_license
15. pkgchk_lintr
16. pkgchk_no_r_subdir
17. pkgchk_num_imports
18. pkgchk_obsolete_pkg_deps
19. pkgchk_on_cran
20. pkgchk_pkgdown
21. pkgchk_pkgname_available
22. pkgchk_renv_activated
23. pkgchk_repo_has_website
24. pkgchk_repo_not_fork
25. pkgchk_srr_okay
26. pkgchk_unique_fn_names
27. pkgchk_uses_dontrun
28. pkgchk_uses_roxygen2
processing file: file181c737e307e04.Rmd
output file: file181c737e307e04.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS file181c737e307e04.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c737e307e04.html --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-clang/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-clang/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/rmarkdown-str181c7378d1dda5.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpjVJZuS/working_dir/RtmpV0tU3U/file181c737e307e04.html
-- Preparing goodpractice for BfvljNbq -----------------------------------------
i Preparing: description
v Preparing: description [21ms]
i Preparing: code_structure
v Preparing: code_structure [11ms]
i Preparing: namespace
v Preparing: namespace [12ms]
i Preparing: covr
v Preparing: covr [6.1s]
i Preparing: cyclocomp
v Preparing: cyclocomp [8.1s]
i Preparing: package_structure
v Preparing: package_structure [12ms]
i Preparing: lintr
v Preparing: lintr [558ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [29.1s]
i Preparing: rd
v Preparing: rd [20ms]
i Preparing: revdep
v Preparing: revdep [531ms]
i Preparing: roxygen2
v Preparing: roxygen2 [129ms]
i Preparing: spelling
v Preparing: spelling [11ms]
i Preparing: urlchecker
i Package BfvljNbq
i Preparing: urlchecker
v Preparing: urlchecker [375ms]
i Preparing: vignette
v Preparing: vignette [12ms]
[ FAIL 5 | WARN 0 | SKIP 20 | PASS 149 ]
══ Skipped tests (20) ══════════════════════════════════════════════════════════
• !test_all is TRUE (2): 'test-goodpractice.R:5:1', 'test-pkgcheck.R:5:1'
• On CRAN (18): 'test-check-fns-have-exs.R:1:1',
'test-check-fns-have-return-vals.R:1:1', 'test-check-left-assign.R:4:1',
'test-check-license.R:1:1', 'test-check-no-r-subdir.R:1:1',
'test-check-num-imports.R:1:1', 'test-check-obsolete-pkg-deps.R:1:1',
'test-check-orcid-ror.R:1:1', 'test-check-pkgdown.R:1:1',
'test-check-pkgname-available.R:1:1', 'test-check-renv.R:1:1',
'test-check-repo-has-website.R:1:1', 'test-check-repo-not-fork.R:1:1',
'test-check-scrap.R:5:1', 'test-check-unique-fn-names.R:1:1',
'test-check-uses-dontrun.R:1:1', 'test-extra-checks.R:4:1',
'test-github.R:1:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-check-ci.R:13:5'): check ci ──────────────────────────────────
Expected `ci_out$check_pass` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-check-ci.R:14:5'): check ci ──────────────────────────────────
Expected `ci_out$summary` to equal " Package has continuous integration checks.".
Differences:
`actual`: " Package has no continuous integration checks."
`expected`: " Package has continuous integration checks."
── Failure ('test-check-ci.R:18:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have length 3.
Actual length: 1.
── Failure ('test-check-ci.R:19:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have names `c("msg_pre", "obj", "msg_post")`.
Differences:
`actual` is NULL
`expected` is a character vector ('msg_pre', 'obj', 'msg_post')
── Error ('test-check-ci.R:20:5'): check ci ────────────────────────────────────
Error in `ci_out$print$msg_pre`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_length(ci_out$print$msg_pre, 1L) at test-check-ci.R:20:5
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
[ FAIL 5 | WARN 0 | SKIP 20 | PASS 149 ]
Deleting unused snapshots: 'extra-checks/checks-extra.html',
'extra-checks/checks-extra.md', 'extra-checks/checks-print.md',
'pkgcheck/checks0.html', 'pkgcheck/checks0.md', 'pkgcheck/checks1.html', and
'pkgcheck/checks1.md'
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [339s/516s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (pkgcheck)
>
> options (repos = c (
+ ropenscireviewtools = "https://ropensci-review-tools.r-universe.dev",
+ CRAN = "https://cloud.r-project.org"
+ ))
>
> test_check ("pkgcheck")
processing file: filef6fe1292b9e8d.Rmd
output file: filef6fe1292b9e8d.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS filef6fe1292b9e8d.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe1292b9e8d.html --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-dev/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/rmarkdown-strf6fe138f9ecff.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe1292b9e8d.html
-- Preparing goodpractice for cachecheckpkg ------------------------------------
i Preparing: description
v Preparing: description [62ms]
i Preparing: code_structure
v Preparing: code_structure [30ms]
i Preparing: namespace
v Preparing: namespace [22ms]
i Preparing: package_structure
v Preparing: package_structure [26ms]
i Preparing: rd
v Preparing: rd [26ms]
i Preparing: revdep
v Preparing: revdep [1.1s]
i Preparing: roxygen2
v Preparing: roxygen2 [154ms]
i Preparing: spelling
v Preparing: spelling [12ms]
i Preparing: urlchecker
i Package cachecheckpkg
i Preparing: urlchecker
v Preparing: urlchecker [671ms]
i Preparing: vignette
v Preparing: vignette [20ms]
-- Preparing goodpractice for cachecheckpkg ------------------------------------
-- Preparing goodpractice for pkgstats -----------------------------------------
i Preparing: description
v Preparing: description [56ms]
i Preparing: code_structure
v Preparing: code_structure [19ms]
i Preparing: namespace
v Preparing: namespace [23ms]
i Preparing: package_structure
v Preparing: package_structure [19ms]
i Preparing: rd
v Preparing: rd [99ms]
i Preparing: revdep
v Preparing: revdep [1.3s]
i Preparing: roxygen2
v Preparing: roxygen2 [2.2s]
i Preparing: spelling
v Preparing: spelling [36ms]
i Preparing: urlchecker
i Package pkgstats
i Preparing: urlchecker
i Checking that VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v Preparing: urlchecker [1.4s]
i Preparing: vignette
v Preparing: vignette [11ms]
Saving _problems/test-check-ci-13.R
Saving _problems/test-check-ci-17.R
Saving _problems/test-check-ci-18.R
Saving _problems/test-check-ci-19.R
Saving _problems/test-check-ci-20.R
processing file: filef6fe152bbc8dc.Rmd
output file: filef6fe152bbc8dc.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS filef6fe152bbc8dc.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe152bbc8dc.html --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-dev/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/rmarkdown-strf6fe1187d43a6.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe152bbc8dc.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Excluding checks that depend on: "cyclocomp", "description", "lintr", "namespace", "rcmdcheck", "rd", "revdep", "roxygen2", "code_structure", "package_structure", "spelling", "tidyverse", "urlchecker", and "vignette"
i Preparing: covr
v Preparing: covr [13.9s]
processing file: filef6fe15c47ad1f.Rmd
output file: filef6fe15c47ad1f.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS filef6fe15c47ad1f.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe15c47ad1f.html --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-dev/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/rmarkdown-strf6fe165753d00.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe15c47ad1f.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [47ms]
i Preparing: code_structure
v Preparing: code_structure [23ms]
i Preparing: namespace
v Preparing: namespace [24ms]
i Preparing: covr
v Preparing: covr [18.2s]
i Preparing: cyclocomp
v Preparing: cyclocomp [40.1s]
i Preparing: package_structure
v Preparing: package_structure [26ms]
i Preparing: lintr
v Preparing: lintr [1.5s]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [1m 16.7s]
i Preparing: rd
v Preparing: rd [137ms]
i Preparing: revdep
v Preparing: revdep [1s]
i Preparing: roxygen2
v Preparing: roxygen2 [175ms]
i Preparing: spelling
v Preparing: spelling [10ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [520ms]
i Preparing: vignette
v Preparing: vignette [23ms]
processing file: filef6fe1199dedc3.Rmd
output file: filef6fe1199dedc3.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS filef6fe1199dedc3.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe1199dedc3.html --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-dev/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/rmarkdown-strf6fe137da884c.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe1199dedc3.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [40ms]
i Preparing: code_structure
v Preparing: code_structure [24ms]
i Preparing: namespace
v Preparing: namespace [54ms]
i Preparing: covr
v Preparing: covr [9.7s]
i Preparing: cyclocomp
v Preparing: cyclocomp [13.7s]
i Preparing: package_structure
v Preparing: package_structure [21ms]
i Preparing: lintr
v Preparing: lintr [1.1s]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [50.5s]
i Preparing: rd
v Preparing: rd [33ms]
i Preparing: revdep
v Preparing: revdep [800ms]
i Preparing: roxygen2
v Preparing: roxygen2 [69ms]
i Preparing: spelling
v Preparing: spelling [75ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [521ms]
i Preparing: vignette
v Preparing: vignette [17ms]
processing file: filef6fe1120ba7bb.Rmd
output file: filef6fe1120ba7bb.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS filef6fe1120ba7bb.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe1120ba7bb.html --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-dev/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/rmarkdown-strf6fe13138cd75.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe1120ba7bb.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [25ms]
i Preparing: code_structure
v Preparing: code_structure [22ms]
i Preparing: namespace
v Preparing: namespace [12ms]
i Preparing: package_structure
v Preparing: package_structure [11ms]
i Preparing: rd
v Preparing: rd [14ms]
i Preparing: revdep
v Preparing: revdep [477ms]
i Preparing: roxygen2
v Preparing: roxygen2 [69ms]
i Preparing: spelling
v Preparing: spelling [11ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [457ms]
i Preparing: vignette
v Preparing: vignette [16ms]
processing file: filef6fe12c038351.Rmd
output file: filef6fe12c038351.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS filef6fe12c038351.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe12c038351.html --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-dev/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/rmarkdown-strf6fe1426c3d5a.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe12c038351.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [20ms]
i Preparing: code_structure
v Preparing: code_structure [10ms]
i Preparing: namespace
v Preparing: namespace [11ms]
i Preparing: package_structure
v Preparing: package_structure [10ms]
i Preparing: rd
v Preparing: rd [13ms]
i Preparing: revdep
v Preparing: revdep [499ms]
i Preparing: roxygen2
v Preparing: roxygen2 [59ms]
i Preparing: spelling
v Preparing: spelling [11ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [449ms]
i Preparing: vignette
v Preparing: vignette [12ms]
i Loading cached pkgstats results from '/tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/pkgcheck/pkgstats_results/testpkgnogp_2026-10-02-19:37:34.635013'
i Loading cached goodpractice results from '/tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/pkgcheck/gp_reports/testpkgnogp_2026-10-02-19:37:34.635013'
i To re-generate, call 'pkgcheck' function with 'use_cache = FALSE', or delete the cached files.
v File 'pkgcheck.yaml' succesfully writen to '/tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/pkgcheckf6fe13c9b49d4/.github'!
v File 'with_inputs.yaml' succesfully writen to '/tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/pkgcheckf6fe13c9b49d4/.github'!
1. pkgchk_branch_is_master
2. pkgchk_ci_badges
3. pkgchk_fns_have_exs
4. pkgchk_fns_have_return_vals
5. pkgchk_has_bugs
6. pkgchk_has_citation
7. pkgchk_has_contrib_md
8. pkgchk_has_orcid
9. pkgchk_has_ror
10. pkgchk_has_scrap
11. pkgchk_has_url
12. pkgchk_has_vignette
13. pkgchk_left_assign
14. pkgchk_license
15. pkgchk_lintr
16. pkgchk_no_r_subdir
17. pkgchk_num_imports
18. pkgchk_obsolete_pkg_deps
19. pkgchk_on_cran
20. pkgchk_pkgdown
21. pkgchk_pkgname_available
22. pkgchk_renv_activated
23. pkgchk_repo_has_website
24. pkgchk_repo_not_fork
25. pkgchk_srr_okay
26. pkgchk_unique_fn_names
27. pkgchk_uses_dontrun
28. pkgchk_uses_roxygen2
processing file: filef6fe12add394d.Rmd
output file: filef6fe12add394d.knit.md
/data/localhost/ripley/bin/pandoc +RTS -K512m -RTS filef6fe12add394d.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe12add394d.html --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/latex-div.lua --lua-filter /data/localhost/ripley/R/test-dev/rmarkdown/rmarkdown/lua/table-classes.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /data/localhost/ripley/R/test-dev/rmarkdown/rmd/h/default.html --syntax-highlighting none --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/rmarkdown-strf6fe16fe2b813.html
[WARNING] Deprecated: --mathjax. Use --math-method=mathjax[:URL] instead.
Output created: /tmp/RtmpWqKs2e/working_dir/RtmpfVcRXR/filef6fe12add394d.html
-- Preparing goodpractice for XCAnYmNg -----------------------------------------
i Preparing: description
v Preparing: description [21ms]
i Preparing: code_structure
v Preparing: code_structure [13ms]
i Preparing: namespace
v Preparing: namespace [15ms]
i Preparing: covr
v Preparing: covr [5.6s]
i Preparing: cyclocomp
v Preparing: cyclocomp [7s]
i Preparing: package_structure
v Preparing: package_structure [16ms]
i Preparing: lintr
v Preparing: lintr [663ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [33.1s]
i Preparing: rd
v Preparing: rd [21ms]
i Preparing: revdep
v Preparing: revdep [606ms]
i Preparing: roxygen2
v Preparing: roxygen2 [60ms]
i Preparing: spelling
v Preparing: spelling [10ms]
i Preparing: urlchecker
i Package XCAnYmNg
i Preparing: urlchecker
v Preparing: urlchecker [329ms]
i Preparing: vignette
v Preparing: vignette [10ms]
[ FAIL 5 | WARN 0 | SKIP 20 | PASS 149 ]
══ Skipped tests (20) ══════════════════════════════════════════════════════════
• !test_all is TRUE (2): 'test-goodpractice.R:5:1', 'test-pkgcheck.R:5:1'
• On CRAN (18): 'test-check-fns-have-exs.R:1:1',
'test-check-fns-have-return-vals.R:1:1', 'test-check-left-assign.R:4:1',
'test-check-license.R:1:1', 'test-check-no-r-subdir.R:1:1',
'test-check-num-imports.R:1:1', 'test-check-obsolete-pkg-deps.R:1:1',
'test-check-orcid-ror.R:1:1', 'test-check-pkgdown.R:1:1',
'test-check-pkgname-available.R:1:1', 'test-check-renv.R:1:1',
'test-check-repo-has-website.R:1:1', 'test-check-repo-not-fork.R:1:1',
'test-check-scrap.R:5:1', 'test-check-unique-fn-names.R:1:1',
'test-check-uses-dontrun.R:1:1', 'test-extra-checks.R:4:1',
'test-github.R:1:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-check-ci.R:13:5'): check ci ──────────────────────────────────
Expected `ci_out$check_pass` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-check-ci.R:14:5'): check ci ──────────────────────────────────
Expected `ci_out$summary` to equal " Package has continuous integration checks.".
Differences:
`actual`: " Package has no continuous integration checks."
`expected`: " Package has continuous integration checks."
── Failure ('test-check-ci.R:18:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have length 3.
Actual length: 1.
── Failure ('test-check-ci.R:19:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have names `c("msg_pre", "obj", "msg_post")`.
Differences:
`actual` is NULL
`expected` is a character vector ('msg_pre', 'obj', 'msg_post')
── Error ('test-check-ci.R:20:5'): check ci ────────────────────────────────────
Error in `ci_out$print$msg_pre`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_length(ci_out$print$msg_pre, 1L) at test-check-ci.R:20:5
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
[ FAIL 5 | WARN 0 | SKIP 20 | PASS 149 ]
Deleting unused snapshots: 'extra-checks/checks-extra.html',
'extra-checks/checks-extra.md', 'extra-checks/checks-print.md',
'pkgcheck/checks0.html', 'pkgcheck/checks0.md', 'pkgcheck/checks1.html', and
'pkgcheck/checks1.md'
Error:
! Test failures.
Execution halted
Flavor: r-devel-linux-x86_64-fedora-gcc
Version: 0.3.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [117s/126s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (pkgcheck)
>
> options (repos = c (
+ ropenscireviewtools = "https://ropensci-review-tools.r-universe.dev",
+ CRAN = "https://cloud.r-project.org"
+ ))
>
> test_check ("pkgcheck")
processing file: filee2c84f0578e2.Rmd
output file: filee2c84f0578e2.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS filee2c84f0578e2.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpZIthgo/filee2c84f0578e2.html --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpZIthgo/rmarkdown-stre2c858daf167.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'filee2c84f0578e2.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpZIthgo/filee2c84f0578e2.html
-- Preparing goodpractice for cachecheckpkg ------------------------------------
i Preparing: description
v Preparing: description [6ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [4ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [7ms]
i Preparing: revdep
v Preparing: revdep [519ms]
i Preparing: roxygen2
v Preparing: roxygen2 [755ms]
i Preparing: spelling
v Preparing: spelling [99ms]
i Preparing: urlchecker
i Package cachecheckpkg
i Preparing: urlchecker
v Preparing: urlchecker [64ms]
i Preparing: vignette
v Preparing: vignette [3ms]
-- Preparing goodpractice for cachecheckpkg ------------------------------------
-- Preparing goodpractice for pkgstats -----------------------------------------
i Preparing: description
v Preparing: description [28ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [4ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [22ms]
i Preparing: revdep
v Preparing: revdep [234ms]
i Preparing: roxygen2
v Preparing: roxygen2 [208ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package pkgstats
i Preparing: urlchecker
i Checking that VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v Preparing: urlchecker [835ms]
i Preparing: vignette
v Preparing: vignette [3ms]
Saving _problems/test-check-ci-17.R
processing file: filee2c836c2af.Rmd
output file: filee2c836c2af.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS filee2c836c2af.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpZIthgo/filee2c836c2af.html --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpZIthgo/rmarkdown-stre2c8b276f45.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'filee2c836c2af.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpZIthgo/filee2c836c2af.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Excluding checks that depend on: "cyclocomp", "description", "lintr", "namespace", "rcmdcheck", "rd", "revdep", "roxygen2", "code_structure", "package_structure", "spelling", "tidyverse", "urlchecker", and "vignette"
i Preparing: covr
v Preparing: covr [2.7s]
processing file: filee2c8113cd131.Rmd
output file: filee2c8113cd131.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS filee2c8113cd131.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpZIthgo/filee2c8113cd131.html --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpZIthgo/rmarkdown-stre2c82fc9f0ce.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'filee2c8113cd131.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpZIthgo/filee2c8113cd131.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [5ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [4ms]
i Preparing: covr
v Preparing: covr [2.3s]
i Preparing: cyclocomp
v Preparing: cyclocomp [7.1s]
i Preparing: package_structure
v Preparing: package_structure [34ms]
i Preparing: lintr
v Preparing: lintr [298ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [13.3s]
i Preparing: rd
v Preparing: rd [7ms]
i Preparing: revdep
v Preparing: revdep [273ms]
i Preparing: roxygen2
v Preparing: roxygen2 [18ms]
i Preparing: spelling
v Preparing: spelling [159ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [58ms]
i Preparing: vignette
v Preparing: vignette [3ms]
processing file: filee2c87f827d06.Rmd
output file: filee2c87f827d06.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS filee2c87f827d06.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpZIthgo/filee2c87f827d06.html --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpZIthgo/rmarkdown-stre2c84fde5650.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'filee2c87f827d06.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpZIthgo/filee2c87f827d06.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [5ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [3ms]
i Preparing: covr
v Preparing: covr [2.2s]
i Preparing: cyclocomp
v Preparing: cyclocomp [2.9s]
i Preparing: package_structure
v Preparing: package_structure [4ms]
i Preparing: lintr
v Preparing: lintr [168ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [12.7s]
i Preparing: rd
v Preparing: rd [6ms]
i Preparing: revdep
v Preparing: revdep [193ms]
i Preparing: roxygen2
v Preparing: roxygen2 [17ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [117ms]
i Preparing: vignette
v Preparing: vignette [5ms]
processing file: filee2c811210084.Rmd
output file: filee2c811210084.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS filee2c811210084.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpZIthgo/filee2c811210084.html --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpZIthgo/rmarkdown-stre2c8da8e2e5.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'filee2c811210084.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpZIthgo/filee2c811210084.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [5ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [3ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [6ms]
i Preparing: revdep
v Preparing: revdep [190ms]
i Preparing: roxygen2
v Preparing: roxygen2 [15ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [52ms]
i Preparing: vignette
v Preparing: vignette [6ms]
processing file: filee2c8aae3b89.Rmd
output file: filee2c8aae3b89.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS filee2c8aae3b89.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpZIthgo/filee2c8aae3b89.html --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpZIthgo/rmarkdown-stre2c834c6a4d9.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'filee2c8aae3b89.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpZIthgo/filee2c8aae3b89.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [4ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [3ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [5ms]
i Preparing: revdep
v Preparing: revdep [177ms]
i Preparing: roxygen2
v Preparing: roxygen2 [15ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [53ms]
i Preparing: vignette
v Preparing: vignette [3ms]
i Loading cached pkgstats results from '/Volumes/Temp/tmp/RtmpZIthgo/pkgcheck/pkgstats_results/testpkgnogp_2026-10-05-12:05:12.823396'
i Loading cached goodpractice results from '/Volumes/Temp/tmp/RtmpZIthgo/pkgcheck/gp_reports/testpkgnogp_2026-10-05-12:05:12.823396'
i To re-generate, call 'pkgcheck' function with 'use_cache = FALSE', or delete the cached files.
1. pkgchk_branch_is_master
2. pkgchk_ci_badges
3. pkgchk_fns_have_exs
4. pkgchk_fns_have_return_vals
5. pkgchk_has_bugs
6. pkgchk_has_citation
7. pkgchk_has_contrib_md
8. pkgchk_has_orcid
9. pkgchk_has_ror
10. pkgchk_has_scrap
11. pkgchk_has_url
12. pkgchk_has_vignette
13. pkgchk_left_assign
14. pkgchk_license
15. pkgchk_lintr
16. pkgchk_no_r_subdir
17. pkgchk_num_imports
18. pkgchk_obsolete_pkg_deps
19. pkgchk_on_cran
20. pkgchk_pkgdown
21. pkgchk_pkgname_available
22. pkgchk_renv_activated
23. pkgchk_repo_has_website
24. pkgchk_repo_not_fork
25. pkgchk_srr_okay
26. pkgchk_unique_fn_names
27. pkgchk_uses_dontrun
28. pkgchk_uses_roxygen2
processing file: filee2c832aff8b4.Rmd
output file: filee2c832aff8b4.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS filee2c832aff8b4.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpZIthgo/filee2c832aff8b4.html --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/sonoma-arm64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpZIthgo/rmarkdown-stre2c83ef10b6b.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'filee2c832aff8b4.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpZIthgo/filee2c832aff8b4.html
-- Preparing goodpractice for cgMLBEFz -----------------------------------------
i Preparing: description
v Preparing: description [5ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [3ms]
i Preparing: covr
v Preparing: covr [2s]
i Preparing: cyclocomp
v Preparing: cyclocomp [2.7s]
i Preparing: package_structure
v Preparing: package_structure [4ms]
i Preparing: lintr
v Preparing: lintr [164ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [12s]
i Preparing: rd
v Preparing: rd [7ms]
i Preparing: revdep
v Preparing: revdep [172ms]
i Preparing: roxygen2
v Preparing: roxygen2 [34ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package cgMLBEFz
i Preparing: urlchecker
v Preparing: urlchecker [53ms]
i Preparing: vignette
v Preparing: vignette [3ms]
[ FAIL 1 | WARN 0 | SKIP 23 | PASS 118 ]
══ Skipped tests (23) ══════════════════════════════════════════════════════════
• !test_all is TRUE (2): 'test-goodpractice.R:5:1', 'test-pkgcheck.R:5:1'
• On CRAN (17): 'test-check-fns-have-exs.R:1:1',
'test-check-fns-have-return-vals.R:1:1', 'test-check-left-assign.R:4:1',
'test-check-license.R:1:1', 'test-check-no-r-subdir.R:1:1',
'test-check-num-imports.R:1:1', 'test-check-obsolete-pkg-deps.R:1:1',
'test-check-orcid-ror.R:1:1', 'test-check-pkgdown.R:1:1',
'test-check-pkgname-available.R:1:1', 'test-check-renv.R:1:1',
'test-check-repo-has-website.R:1:1', 'test-check-repo-not-fork.R:1:1',
'test-check-scrap.R:5:1', 'test-check-unique-fn-names.R:1:1',
'test-check-uses-dontrun.R:1:1', 'test-extra-checks.R:4:1'
• On Mac (4): 'test-check-ci.R:24:5', 'test-github.R:20:5',
'test-github.R:66:1', 'test-path-fns.R:3:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-check-ci.R:14:5'): check ci ──────────────────────────────────
Expected `ci_out$summary` to equal " Package has continuous integration checks.".
Differences:
actual vs expected
- " Package has continuous integration checks, but no badges on README"
+ " Package has continuous integration checks."
[ FAIL 1 | WARN 0 | SKIP 23 | PASS 118 ]
Deleting unused snapshots: 'extra-checks/checks-extra.html',
'extra-checks/checks-extra.md', 'extra-checks/checks-print.md',
'github/pkgcheck.yaml', 'github/with_inputs.yaml', 'pkgcheck/checks0.html',
'pkgcheck/checks0.md', 'pkgcheck/checks1.html', and 'pkgcheck/checks1.md'
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-arm64
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [340s/434s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (pkgcheck)
>
> options (repos = c (
+ ropenscireviewtools = "https://ropensci-review-tools.r-universe.dev",
+ CRAN = "https://cloud.r-project.org"
+ ))
>
> test_check ("pkgcheck")
processing file: file3f4173c6cac.Rmd
output file: file3f4173c6cac.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file3f4173c6cac.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmp8xfCBe/file3f4173c6cac.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmp8xfCBe/rmarkdown-str3f42b57b73a.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file3f4173c6cac.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmp8xfCBe/file3f4173c6cac.html
-- Preparing goodpractice for cachecheckpkg ------------------------------------
i Preparing: description
v Preparing: description [30ms]
i Preparing: code_structure
v Preparing: code_structure [29ms]
i Preparing: namespace
v Preparing: namespace [28ms]
i Preparing: package_structure
v Preparing: package_structure [28ms]
i Preparing: rd
v Preparing: rd [35ms]
i Preparing: revdep
v Preparing: revdep [1.8s]
i Preparing: roxygen2
v Preparing: roxygen2 [293ms]
i Preparing: spelling
v Preparing: spelling [24ms]
i Preparing: urlchecker
i Package cachecheckpkg
i Preparing: urlchecker
v Preparing: urlchecker [481ms]
i Preparing: vignette
v Preparing: vignette [10ms]
-- Preparing goodpractice for cachecheckpkg ------------------------------------
-- Preparing goodpractice for pkgstats -----------------------------------------
i Preparing: description
v Preparing: description [53ms]
i Preparing: code_structure
v Preparing: code_structure [10ms]
i Preparing: namespace
v Preparing: namespace [11ms]
i Preparing: package_structure
v Preparing: package_structure [10ms]
i Preparing: rd
v Preparing: rd [103ms]
i Preparing: revdep
v Preparing: revdep [943ms]
i Preparing: roxygen2
v Preparing: roxygen2 [1.1s]
i Preparing: spelling
v Preparing: spelling [17ms]
i Preparing: urlchecker
i Package pkgstats
i Preparing: urlchecker
i Checking that VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v Preparing: urlchecker [1.3s]
i Preparing: vignette
v Preparing: vignette [10ms]
Saving _problems/test-check-ci-13.R
Saving _problems/test-check-ci-17.R
Saving _problems/test-check-ci-18.R
Saving _problems/test-check-ci-19.R
Saving _problems/test-check-ci-20.R
processing file: file3f43913931a.Rmd
output file: file3f43913931a.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file3f43913931a.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmp8xfCBe/file3f43913931a.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmp8xfCBe/rmarkdown-str3f4341ead3c.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file3f43913931a.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmp8xfCBe/file3f43913931a.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Excluding checks that depend on: "cyclocomp", "description", "lintr", "namespace", "rcmdcheck", "rd", "revdep", "roxygen2", "code_structure", "package_structure", "spelling", "tidyverse", "urlchecker", and "vignette"
i Preparing: covr
v Preparing: covr [8.7s]
processing file: file3f44415c535.Rmd
output file: file3f44415c535.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file3f44415c535.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmp8xfCBe/file3f44415c535.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmp8xfCBe/rmarkdown-str3f471463d7e.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file3f44415c535.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmp8xfCBe/file3f44415c535.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [15ms]
i Preparing: code_structure
v Preparing: code_structure [11ms]
i Preparing: namespace
v Preparing: namespace [12ms]
i Preparing: covr
v Preparing: covr [9.2s]
i Preparing: cyclocomp
v Preparing: cyclocomp [26.5s]
i Preparing: package_structure
v Preparing: package_structure [18ms]
i Preparing: lintr
v Preparing: lintr [1.4s]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [58s]
i Preparing: rd
v Preparing: rd [51ms]
i Preparing: revdep
v Preparing: revdep [620ms]
i Preparing: roxygen2
v Preparing: roxygen2 [95ms]
i Preparing: spelling
v Preparing: spelling [12ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [369ms]
i Preparing: vignette
v Preparing: vignette [10ms]
processing file: file3f4731ef6c7.Rmd
output file: file3f4731ef6c7.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file3f4731ef6c7.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmp8xfCBe/file3f4731ef6c7.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmp8xfCBe/rmarkdown-str3f475dbbddc.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file3f4731ef6c7.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmp8xfCBe/file3f4731ef6c7.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [14ms]
i Preparing: code_structure
v Preparing: code_structure [10ms]
i Preparing: namespace
v Preparing: namespace [11ms]
i Preparing: covr
v Preparing: covr [7.5s]
i Preparing: cyclocomp
v Preparing: cyclocomp [8.9s]
i Preparing: package_structure
v Preparing: package_structure [14ms]
i Preparing: lintr
v Preparing: lintr [576ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [41.1s]
i Preparing: rd
v Preparing: rd [25ms]
i Preparing: revdep
v Preparing: revdep [544ms]
i Preparing: roxygen2
v Preparing: roxygen2 [92ms]
i Preparing: spelling
v Preparing: spelling [10ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [284ms]
i Preparing: vignette
v Preparing: vignette [12ms]
processing file: file3f419edb580.Rmd
output file: file3f419edb580.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file3f419edb580.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmp8xfCBe/file3f419edb580.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmp8xfCBe/rmarkdown-str3f44526f3cc.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file3f419edb580.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmp8xfCBe/file3f419edb580.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [14ms]
i Preparing: code_structure
v Preparing: code_structure [10ms]
i Preparing: namespace
v Preparing: namespace [12ms]
i Preparing: package_structure
v Preparing: package_structure [10ms]
i Preparing: rd
v Preparing: rd [19ms]
i Preparing: revdep
v Preparing: revdep [582ms]
i Preparing: roxygen2
v Preparing: roxygen2 [59ms]
i Preparing: spelling
v Preparing: spelling [10ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [303ms]
i Preparing: vignette
v Preparing: vignette [10ms]
processing file: file3f469f95d32.Rmd
output file: file3f469f95d32.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file3f469f95d32.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmp8xfCBe/file3f469f95d32.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmp8xfCBe/rmarkdown-str3f47255b3f8.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file3f469f95d32.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmp8xfCBe/file3f469f95d32.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [13ms]
i Preparing: code_structure
v Preparing: code_structure [9ms]
i Preparing: namespace
v Preparing: namespace [10ms]
i Preparing: package_structure
v Preparing: package_structure [9ms]
i Preparing: rd
v Preparing: rd [17ms]
i Preparing: revdep
v Preparing: revdep [516ms]
i Preparing: roxygen2
v Preparing: roxygen2 [56ms]
i Preparing: spelling
v Preparing: spelling [9ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [274ms]
i Preparing: vignette
v Preparing: vignette [10ms]
i Loading cached pkgstats results from '/Volumes/Temp/tmp/Rtmp8xfCBe/pkgcheck/pkgstats_results/testpkgnogp_2026-10-04-16:34:24.940578'
i Loading cached goodpractice results from '/Volumes/Temp/tmp/Rtmp8xfCBe/pkgcheck/gp_reports/testpkgnogp_2026-10-04-16:34:24.940578'
i To re-generate, call 'pkgcheck' function with 'use_cache = FALSE', or delete the cached files.
1. pkgchk_branch_is_master
2. pkgchk_ci_badges
3. pkgchk_fns_have_exs
4. pkgchk_fns_have_return_vals
5. pkgchk_has_bugs
6. pkgchk_has_citation
7. pkgchk_has_contrib_md
8. pkgchk_has_orcid
9. pkgchk_has_ror
10. pkgchk_has_scrap
11. pkgchk_has_url
12. pkgchk_has_vignette
13. pkgchk_left_assign
14. pkgchk_license
15. pkgchk_lintr
16. pkgchk_no_r_subdir
17. pkgchk_num_imports
18. pkgchk_obsolete_pkg_deps
19. pkgchk_on_cran
20. pkgchk_pkgdown
21. pkgchk_pkgname_available
22. pkgchk_renv_activated
23. pkgchk_repo_has_website
24. pkgchk_repo_not_fork
25. pkgchk_srr_okay
26. pkgchk_unique_fn_names
27. pkgchk_uses_dontrun
28. pkgchk_uses_roxygen2
processing file: file3f46e86fd77.Rmd
output file: file3f46e86fd77.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file3f46e86fd77.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmp8xfCBe/file3f46e86fd77.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.6/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmp8xfCBe/rmarkdown-str3f4606ac851.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file3f46e86fd77.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmp8xfCBe/file3f46e86fd77.html
-- Preparing goodpractice for SnOfPYoI -----------------------------------------
i Preparing: description
v Preparing: description [12ms]
i Preparing: code_structure
v Preparing: code_structure [8ms]
i Preparing: namespace
v Preparing: namespace [8ms]
i Preparing: covr
v Preparing: covr [5.2s]
i Preparing: cyclocomp
v Preparing: cyclocomp [7.2s]
i Preparing: package_structure
v Preparing: package_structure [12ms]
i Preparing: lintr
v Preparing: lintr [506ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [32.4s]
i Preparing: rd
v Preparing: rd [19ms]
i Preparing: revdep
v Preparing: revdep [475ms]
i Preparing: roxygen2
v Preparing: roxygen2 [47ms]
i Preparing: spelling
v Preparing: spelling [8ms]
i Preparing: urlchecker
i Package SnOfPYoI
i Preparing: urlchecker
v Preparing: urlchecker [202ms]
i Preparing: vignette
v Preparing: vignette [9ms]
[ FAIL 5 | WARN 0 | SKIP 22 | PASS 115 ]
══ Skipped tests (22) ══════════════════════════════════════════════════════════
• !test_all is TRUE (2): 'test-goodpractice.R:5:1', 'test-pkgcheck.R:5:1'
• On CRAN (17): 'test-check-fns-have-exs.R:1:1',
'test-check-fns-have-return-vals.R:1:1', 'test-check-left-assign.R:4:1',
'test-check-license.R:1:1', 'test-check-no-r-subdir.R:1:1',
'test-check-num-imports.R:1:1', 'test-check-obsolete-pkg-deps.R:1:1',
'test-check-orcid-ror.R:1:1', 'test-check-pkgdown.R:1:1',
'test-check-pkgname-available.R:1:1', 'test-check-renv.R:1:1',
'test-check-repo-has-website.R:1:1', 'test-check-repo-not-fork.R:1:1',
'test-check-scrap.R:5:1', 'test-check-unique-fn-names.R:1:1',
'test-check-uses-dontrun.R:1:1', 'test-extra-checks.R:4:1'
• On Mac (3): 'test-github.R:20:5', 'test-github.R:66:1', 'test-path-fns.R:3:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-check-ci.R:13:5'): check ci ──────────────────────────────────
Expected `ci_out$check_pass` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-check-ci.R:14:5'): check ci ──────────────────────────────────
Expected `ci_out$summary` to equal " Package has continuous integration checks.".
Differences:
`actual`: " Package has no continuous integration checks."
`expected`: " Package has continuous integration checks."
── Failure ('test-check-ci.R:18:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have length 3.
Actual length: 1.
── Failure ('test-check-ci.R:19:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have names `c("msg_pre", "obj", "msg_post")`.
Differences:
`actual` is NULL
`expected` is a character vector ('msg_pre', 'obj', 'msg_post')
── Error ('test-check-ci.R:20:5'): check ci ────────────────────────────────────
Error in `ci_out$print$msg_pre`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_length(ci_out$print$msg_pre, 1L) at test-check-ci.R:20:5
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
[ FAIL 5 | WARN 0 | SKIP 22 | PASS 115 ]
Deleting unused snapshots: 'extra-checks/checks-extra.html',
'extra-checks/checks-extra.md', 'extra-checks/checks-print.md',
'github/pkgcheck.yaml', 'github/with_inputs.yaml', 'pkgcheck/checks0.html',
'pkgcheck/checks0.md', 'pkgcheck/checks1.html', and 'pkgcheck/checks1.md'
Error:
! Test failures.
Execution halted
Flavor: r-release-macos-x86_64
Version: 0.3.1
Check: tests
Result: ERROR
Running ‘testthat.R’ [165s/173s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (pkgcheck)
>
> options (repos = c (
+ ropenscireviewtools = "https://ropensci-review-tools.r-universe.dev",
+ CRAN = "https://cloud.r-project.org"
+ ))
>
> test_check ("pkgcheck")
processing file: file134085d00d946.Rmd
output file: file134085d00d946.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS file134085d00d946.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpyABxdq/file134085d00d946.html --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpyABxdq/rmarkdown-str134084bc62a4d.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file134085d00d946.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpyABxdq/file134085d00d946.html
-- Preparing goodpractice for cachecheckpkg ------------------------------------
i Preparing: description
v Preparing: description [9ms]
i Preparing: code_structure
v Preparing: code_structure [4ms]
i Preparing: namespace
v Preparing: namespace [6ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [10ms]
i Preparing: revdep
v Preparing: revdep [639ms]
i Preparing: roxygen2
v Preparing: roxygen2 [573ms]
i Preparing: spelling
v Preparing: spelling [4ms]
i Preparing: urlchecker
i Package cachecheckpkg
i Preparing: urlchecker
v Preparing: urlchecker [191ms]
i Preparing: vignette
v Preparing: vignette [4ms]
-- Preparing goodpractice for cachecheckpkg ------------------------------------
-- Preparing goodpractice for pkgstats -----------------------------------------
i Preparing: description
v Preparing: description [32ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [4ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [51ms]
i Preparing: revdep
v Preparing: revdep [273ms]
i Preparing: roxygen2
v Preparing: roxygen2 [334ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package pkgstats
i Preparing: urlchecker
i Checking that VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v Preparing: urlchecker [957ms]
i Preparing: vignette
v Preparing: vignette [3ms]
Saving _problems/test-check-ci-17.R
processing file: file134081022c6db.Rmd
output file: file134081022c6db.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS file134081022c6db.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpyABxdq/file134081022c6db.html --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpyABxdq/rmarkdown-str134085b2d5c23.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file134081022c6db.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpyABxdq/file134081022c6db.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Excluding checks that depend on: "cyclocomp", "description", "lintr", "namespace", "rcmdcheck", "rd", "revdep", "roxygen2", "code_structure", "package_structure", "spelling", "tidyverse", "urlchecker", and "vignette"
i Preparing: covr
v Preparing: covr [4.3s]
processing file: file134086614fb0d.Rmd
output file: file134086614fb0d.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS file134086614fb0d.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpyABxdq/file134086614fb0d.html --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpyABxdq/rmarkdown-str134086b6e46d6.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file134086614fb0d.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpyABxdq/file134086614fb0d.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [6ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [5ms]
i Preparing: covr
v Preparing: covr [4s]
i Preparing: cyclocomp
v Preparing: cyclocomp [14.7s]
i Preparing: package_structure
v Preparing: package_structure [8ms]
i Preparing: lintr
v Preparing: lintr [302ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [19.7s]
i Preparing: rd
v Preparing: rd [71ms]
i Preparing: revdep
v Preparing: revdep [260ms]
i Preparing: roxygen2
v Preparing: roxygen2 [48ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [93ms]
i Preparing: vignette
v Preparing: vignette [3ms]
processing file: file134083caf1977.Rmd
output file: file134083caf1977.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS file134083caf1977.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpyABxdq/file134083caf1977.html --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpyABxdq/rmarkdown-str13408bb0f2c1.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file134083caf1977.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpyABxdq/file134083caf1977.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [5ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [27ms]
i Preparing: covr
v Preparing: covr [2.7s]
i Preparing: cyclocomp
v Preparing: cyclocomp [3.6s]
i Preparing: package_structure
v Preparing: package_structure [8ms]
i Preparing: lintr
v Preparing: lintr [305ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [18.5s]
i Preparing: rd
v Preparing: rd [10ms]
i Preparing: revdep
v Preparing: revdep [290ms]
i Preparing: roxygen2
v Preparing: roxygen2 [24ms]
i Preparing: spelling
v Preparing: spelling [4ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [84ms]
i Preparing: vignette
v Preparing: vignette [3ms]
processing file: file1340860d545a4.Rmd
output file: file1340860d545a4.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS file1340860d545a4.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpyABxdq/file1340860d545a4.html --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpyABxdq/rmarkdown-str1340851cf43a6.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file1340860d545a4.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpyABxdq/file1340860d545a4.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [12ms]
i Preparing: code_structure
v Preparing: code_structure [7ms]
i Preparing: namespace
v Preparing: namespace [4ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [8ms]
i Preparing: revdep
v Preparing: revdep [261ms]
i Preparing: roxygen2
v Preparing: roxygen2 [21ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [81ms]
i Preparing: vignette
v Preparing: vignette [26ms]
processing file: file134084b96442.Rmd
output file: file134084b96442.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS file134084b96442.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpyABxdq/file134084b96442.html --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpyABxdq/rmarkdown-str1340827652b7a.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file134084b96442.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpyABxdq/file134084b96442.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [5ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [3ms]
i Preparing: package_structure
v Preparing: package_structure [3ms]
i Preparing: rd
v Preparing: rd [7ms]
i Preparing: revdep
v Preparing: revdep [201ms]
i Preparing: roxygen2
v Preparing: roxygen2 [32ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [82ms]
i Preparing: vignette
v Preparing: vignette [4ms]
i Loading cached pkgstats results from '/Volumes/Temp/tmp/RtmpyABxdq/pkgcheck/pkgstats_results/testpkgnogp_2026-10-05-11:49:41.925425'
i Loading cached goodpractice results from '/Volumes/Temp/tmp/RtmpyABxdq/pkgcheck/gp_reports/testpkgnogp_2026-10-05-11:49:41.925425'
i To re-generate, call 'pkgcheck' function with 'use_cache = FALSE', or delete the cached files.
1. pkgchk_branch_is_master
2. pkgchk_ci_badges
3. pkgchk_fns_have_exs
4. pkgchk_fns_have_return_vals
5. pkgchk_has_bugs
6. pkgchk_has_citation
7. pkgchk_has_contrib_md
8. pkgchk_has_orcid
9. pkgchk_has_ror
10. pkgchk_has_scrap
11. pkgchk_has_url
12. pkgchk_has_vignette
13. pkgchk_left_assign
14. pkgchk_license
15. pkgchk_lintr
16. pkgchk_no_r_subdir
17. pkgchk_num_imports
18. pkgchk_obsolete_pkg_deps
19. pkgchk_on_cran
20. pkgchk_pkgdown
21. pkgchk_pkgname_available
22. pkgchk_renv_activated
23. pkgchk_repo_has_website
24. pkgchk_repo_not_fork
25. pkgchk_srr_okay
26. pkgchk_unique_fn_names
27. pkgchk_uses_dontrun
28. pkgchk_uses_roxygen2
processing file: file13408603e0e00.Rmd
output file: file13408603e0e00.knit.md
/opt/R/arm64/bin/pandoc +RTS -K512m -RTS file13408603e0e00.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/RtmpyABxdq/file13408603e0e00.html --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-arm64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/RtmpyABxdq/rmarkdown-str13408a09535d.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file13408603e0e00.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/RtmpyABxdq/file13408603e0e00.html
-- Preparing goodpractice for LQiKyzcN -----------------------------------------
i Preparing: description
v Preparing: description [4ms]
i Preparing: code_structure
v Preparing: code_structure [3ms]
i Preparing: namespace
v Preparing: namespace [3ms]
i Preparing: covr
v Preparing: covr [2.2s]
i Preparing: cyclocomp
v Preparing: cyclocomp [3.1s]
i Preparing: package_structure
v Preparing: package_structure [7ms]
i Preparing: lintr
v Preparing: lintr [186ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [15.5s]
i Preparing: rd
v Preparing: rd [11ms]
i Preparing: revdep
v Preparing: revdep [234ms]
i Preparing: roxygen2
v Preparing: roxygen2 [23ms]
i Preparing: spelling
v Preparing: spelling [3ms]
i Preparing: urlchecker
i Package LQiKyzcN
i Preparing: urlchecker
v Preparing: urlchecker [74ms]
i Preparing: vignette
v Preparing: vignette [3ms]
[ FAIL 1 | WARN 0 | SKIP 23 | PASS 118 ]
══ Skipped tests (23) ══════════════════════════════════════════════════════════
• !test_all is TRUE (2): 'test-goodpractice.R:5:1', 'test-pkgcheck.R:5:1'
• On CRAN (17): 'test-check-fns-have-exs.R:1:1',
'test-check-fns-have-return-vals.R:1:1', 'test-check-left-assign.R:4:1',
'test-check-license.R:1:1', 'test-check-no-r-subdir.R:1:1',
'test-check-num-imports.R:1:1', 'test-check-obsolete-pkg-deps.R:1:1',
'test-check-orcid-ror.R:1:1', 'test-check-pkgdown.R:1:1',
'test-check-pkgname-available.R:1:1', 'test-check-renv.R:1:1',
'test-check-repo-has-website.R:1:1', 'test-check-repo-not-fork.R:1:1',
'test-check-scrap.R:5:1', 'test-check-unique-fn-names.R:1:1',
'test-check-uses-dontrun.R:1:1', 'test-extra-checks.R:4:1'
• On Mac (4): 'test-check-ci.R:24:5', 'test-github.R:20:5',
'test-github.R:66:1', 'test-path-fns.R:3:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-check-ci.R:14:5'): check ci ──────────────────────────────────
Expected `ci_out$summary` to equal " Package has continuous integration checks.".
Differences:
actual vs expected
- " Package has continuous integration checks, but no badges on README"
+ " Package has continuous integration checks."
[ FAIL 1 | WARN 0 | SKIP 23 | PASS 118 ]
Deleting unused snapshots: 'extra-checks/checks-extra.html',
'extra-checks/checks-extra.md', 'extra-checks/checks-print.md',
'github/pkgcheck.yaml', 'github/with_inputs.yaml', 'pkgcheck/checks0.html',
'pkgcheck/checks0.md', 'pkgcheck/checks1.html', and 'pkgcheck/checks1.md'
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.3.2
Check: tests
Result: ERROR
Running ‘testthat.R’ [336s/428s]
Running the tests in ‘tests/testthat.R’ failed.
Complete output:
> library (testthat)
> library (pkgcheck)
>
> options (repos = c (
+ ropenscireviewtools = "https://ropensci-review-tools.r-universe.dev",
+ CRAN = "https://cloud.r-project.org"
+ ))
>
> test_check ("pkgcheck")
processing file: file88e373347e93.Rmd
output file: file88e373347e93.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file88e373347e93.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmpqusg6b/file88e373347e93.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmpqusg6b/rmarkdown-str88e36721d705.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file88e373347e93.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmpqusg6b/file88e373347e93.html
-- Preparing goodpractice for cachecheckpkg ------------------------------------
i Preparing: description
v Preparing: description [33ms]
i Preparing: code_structure
v Preparing: code_structure [23ms]
i Preparing: namespace
v Preparing: namespace [52ms]
i Preparing: package_structure
v Preparing: package_structure [29ms]
i Preparing: rd
v Preparing: rd [107ms]
i Preparing: revdep
v Preparing: revdep [1.8s]
i Preparing: roxygen2
v Preparing: roxygen2 [308ms]
i Preparing: spelling
v Preparing: spelling [11ms]
i Preparing: urlchecker
i Package cachecheckpkg
i Preparing: urlchecker
v Preparing: urlchecker [342ms]
i Preparing: vignette
v Preparing: vignette [10ms]
-- Preparing goodpractice for cachecheckpkg ------------------------------------
-- Preparing goodpractice for pkgstats -----------------------------------------
i Preparing: description
v Preparing: description [15ms]
i Preparing: code_structure
v Preparing: code_structure [10ms]
i Preparing: namespace
v Preparing: namespace [13ms]
i Preparing: package_structure
v Preparing: package_structure [10ms]
i Preparing: rd
v Preparing: rd [70ms]
i Preparing: revdep
v Preparing: revdep [1.1s]
i Preparing: roxygen2
v Preparing: roxygen2 [790ms]
i Preparing: spelling
v Preparing: spelling [19ms]
i Preparing: urlchecker
i Package pkgstats
i Preparing: urlchecker
i Checking that VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v VignetteBuilder package knitr is installed.
i Preparing: urlchecker
v Preparing: urlchecker [4.5s]
i Preparing: vignette
v Preparing: vignette [9ms]
Saving _problems/test-check-ci-13.R
Saving _problems/test-check-ci-17.R
Saving _problems/test-check-ci-18.R
Saving _problems/test-check-ci-19.R
Saving _problems/test-check-ci-20.R
processing file: file88e37d78f875.Rmd
output file: file88e37d78f875.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file88e37d78f875.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmpqusg6b/file88e37d78f875.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmpqusg6b/rmarkdown-str88e3110009ae.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file88e37d78f875.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmpqusg6b/file88e37d78f875.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Excluding checks that depend on: "cyclocomp", "description", "lintr", "namespace", "rcmdcheck", "rd", "revdep", "roxygen2", "code_structure", "package_structure", "spelling", "tidyverse", "urlchecker", and "vignette"
i Preparing: covr
v Preparing: covr [7.4s]
processing file: file88e319b5444a.Rmd
output file: file88e319b5444a.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file88e319b5444a.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmpqusg6b/file88e319b5444a.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmpqusg6b/rmarkdown-str88e34b966375.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file88e319b5444a.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmpqusg6b/file88e319b5444a.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [42ms]
i Preparing: code_structure
v Preparing: code_structure [11ms]
i Preparing: namespace
v Preparing: namespace [10ms]
i Preparing: covr
v Preparing: covr [7.4s]
i Preparing: cyclocomp
v Preparing: cyclocomp [27s]
i Preparing: package_structure
v Preparing: package_structure [64ms]
i Preparing: lintr
v Preparing: lintr [781ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [50.6s]
i Preparing: rd
v Preparing: rd [48ms]
i Preparing: revdep
v Preparing: revdep [685ms]
i Preparing: roxygen2
v Preparing: roxygen2 [250ms]
i Preparing: spelling
v Preparing: spelling [16ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [324ms]
i Preparing: vignette
v Preparing: vignette [10ms]
processing file: file88e3337e9f10.Rmd
output file: file88e3337e9f10.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file88e3337e9f10.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmpqusg6b/file88e3337e9f10.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmpqusg6b/rmarkdown-str88e33dfcedd9.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file88e3337e9f10.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmpqusg6b/file88e3337e9f10.html
-- Preparing goodpractice for testpkgwithgp ------------------------------------
i Preparing: description
v Preparing: description [13ms]
i Preparing: code_structure
v Preparing: code_structure [9ms]
i Preparing: namespace
v Preparing: namespace [33ms]
i Preparing: covr
v Preparing: covr [7.5s]
i Preparing: cyclocomp
v Preparing: cyclocomp [9.4s]
i Preparing: package_structure
v Preparing: package_structure [12ms]
i Preparing: lintr
v Preparing: lintr [669ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [47.8s]
i Preparing: rd
v Preparing: rd [20ms]
i Preparing: revdep
v Preparing: revdep [597ms]
i Preparing: roxygen2
v Preparing: roxygen2 [78ms]
i Preparing: spelling
v Preparing: spelling [13ms]
i Preparing: urlchecker
i Package testpkgwithgp
i Preparing: urlchecker
v Preparing: urlchecker [313ms]
i Preparing: vignette
v Preparing: vignette [10ms]
processing file: file88e31e0e0b3e.Rmd
output file: file88e31e0e0b3e.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file88e31e0e0b3e.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmpqusg6b/file88e31e0e0b3e.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmpqusg6b/rmarkdown-str88e32c0422dc.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file88e31e0e0b3e.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmpqusg6b/file88e31e0e0b3e.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [13ms]
i Preparing: code_structure
v Preparing: code_structure [10ms]
i Preparing: namespace
v Preparing: namespace [10ms]
i Preparing: package_structure
v Preparing: package_structure [9ms]
i Preparing: rd
v Preparing: rd [16ms]
i Preparing: revdep
v Preparing: revdep [588ms]
i Preparing: roxygen2
v Preparing: roxygen2 [73ms]
i Preparing: spelling
v Preparing: spelling [19ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [319ms]
i Preparing: vignette
v Preparing: vignette [10ms]
processing file: file88e3450bd0c.Rmd
output file: file88e3450bd0c.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file88e3450bd0c.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmpqusg6b/file88e3450bd0c.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmpqusg6b/rmarkdown-str88e350ab610a.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file88e3450bd0c.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmpqusg6b/file88e3450bd0c.html
-- Preparing goodpractice for testpkgnogp --------------------------------------
i Preparing: description
v Preparing: description [13ms]
i Preparing: code_structure
v Preparing: code_structure [9ms]
i Preparing: namespace
v Preparing: namespace [10ms]
i Preparing: package_structure
v Preparing: package_structure [9ms]
i Preparing: rd
v Preparing: rd [16ms]
i Preparing: revdep
v Preparing: revdep [548ms]
i Preparing: roxygen2
v Preparing: roxygen2 [61ms]
i Preparing: spelling
v Preparing: spelling [19ms]
i Preparing: urlchecker
i Package testpkgnogp
i Preparing: urlchecker
v Preparing: urlchecker [318ms]
i Preparing: vignette
v Preparing: vignette [9ms]
i Loading cached pkgstats results from '/Volumes/Temp/tmp/Rtmpqusg6b/pkgcheck/pkgstats_results/testpkgnogp_2026-10-04-18:42:44.790728'
i Loading cached goodpractice results from '/Volumes/Temp/tmp/Rtmpqusg6b/pkgcheck/gp_reports/testpkgnogp_2026-10-04-18:42:44.790728'
i To re-generate, call 'pkgcheck' function with 'use_cache = FALSE', or delete the cached files.
1. pkgchk_branch_is_master
2. pkgchk_ci_badges
3. pkgchk_fns_have_exs
4. pkgchk_fns_have_return_vals
5. pkgchk_has_bugs
6. pkgchk_has_citation
7. pkgchk_has_contrib_md
8. pkgchk_has_orcid
9. pkgchk_has_ror
10. pkgchk_has_scrap
11. pkgchk_has_url
12. pkgchk_has_vignette
13. pkgchk_left_assign
14. pkgchk_license
15. pkgchk_lintr
16. pkgchk_no_r_subdir
17. pkgchk_num_imports
18. pkgchk_obsolete_pkg_deps
19. pkgchk_on_cran
20. pkgchk_pkgdown
21. pkgchk_pkgname_available
22. pkgchk_renv_activated
23. pkgchk_repo_has_website
24. pkgchk_repo_not_fork
25. pkgchk_srr_okay
26. pkgchk_unique_fn_names
27. pkgchk_uses_dontrun
28. pkgchk_uses_roxygen2
processing file: file88e36fbf8ab5.Rmd
output file: file88e36fbf8ab5.knit.md
/opt/R/x86_64/bin/pandoc +RTS -K512m -RTS file88e36fbf8ab5.knit.md --to html4 --from markdown+autolink_bare_uris+tex_math_single_backslash --output /Volumes/Temp/tmp/Rtmpqusg6b/file88e36fbf8ab5.html --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/pagebreak.lua --lua-filter /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmarkdown/lua/latex-div.lua --embed-resources --standalone --variable bs3=TRUE --section-divs --template /Volumes/Builds/packages/big-sur-x86_64/Rlib/4.5/rmarkdown/rmd/h/default.html --no-highlight --variable highlightjs=1 --variable theme=bootstrap --mathjax --variable 'mathjax-url=https://mathjax.rstudio.com/latest/MathJax.js?config=TeX-AMS-MML_HTMLorMML' --include-in-header /Volumes/Temp/tmp/Rtmpqusg6b/rmarkdown-str88e382baa64.html
[WARNING] This document format requires a nonempty <title> element.
Defaulting to 'file88e36fbf8ab5.knit' as the title.
To specify a title, use 'title' in metadata or --metadata title="...".
Output created: /Volumes/Temp/tmp/Rtmpqusg6b/file88e36fbf8ab5.html
-- Preparing goodpractice for YaBZlfVL -----------------------------------------
i Preparing: description
v Preparing: description [11ms]
i Preparing: code_structure
v Preparing: code_structure [9ms]
i Preparing: namespace
v Preparing: namespace [9ms]
i Preparing: covr
v Preparing: covr [5.3s]
i Preparing: cyclocomp
v Preparing: cyclocomp [6.7s]
i Preparing: package_structure
v Preparing: package_structure [12ms]
i Preparing: lintr
v Preparing: lintr [497ms]
i Preparing: rcmdcheck
v Preparing: rcmdcheck [33.6s]
i Preparing: rd
v Preparing: rd [16ms]
i Preparing: revdep
v Preparing: revdep [436ms]
i Preparing: roxygen2
v Preparing: roxygen2 [47ms]
i Preparing: spelling
v Preparing: spelling [8ms]
i Preparing: urlchecker
i Package YaBZlfVL
i Preparing: urlchecker
v Preparing: urlchecker [191ms]
i Preparing: vignette
v Preparing: vignette [8ms]
[ FAIL 5 | WARN 0 | SKIP 22 | PASS 115 ]
══ Skipped tests (22) ══════════════════════════════════════════════════════════
• !test_all is TRUE (2): 'test-goodpractice.R:5:1', 'test-pkgcheck.R:5:1'
• On CRAN (17): 'test-check-fns-have-exs.R:1:1',
'test-check-fns-have-return-vals.R:1:1', 'test-check-left-assign.R:4:1',
'test-check-license.R:1:1', 'test-check-no-r-subdir.R:1:1',
'test-check-num-imports.R:1:1', 'test-check-obsolete-pkg-deps.R:1:1',
'test-check-orcid-ror.R:1:1', 'test-check-pkgdown.R:1:1',
'test-check-pkgname-available.R:1:1', 'test-check-renv.R:1:1',
'test-check-repo-has-website.R:1:1', 'test-check-repo-not-fork.R:1:1',
'test-check-scrap.R:5:1', 'test-check-unique-fn-names.R:1:1',
'test-check-uses-dontrun.R:1:1', 'test-extra-checks.R:4:1'
• On Mac (3): 'test-github.R:20:5', 'test-github.R:66:1', 'test-path-fns.R:3:1'
══ Failed tests ════════════════════════════════════════════════════════════════
── Failure ('test-check-ci.R:13:5'): check ci ──────────────────────────────────
Expected `ci_out$check_pass` to be TRUE.
Differences:
`actual`: FALSE
`expected`: TRUE
── Failure ('test-check-ci.R:14:5'): check ci ──────────────────────────────────
Expected `ci_out$summary` to equal " Package has continuous integration checks.".
Differences:
`actual`: " Package has no continuous integration checks."
`expected`: " Package has continuous integration checks."
── Failure ('test-check-ci.R:18:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have length 3.
Actual length: 1.
── Failure ('test-check-ci.R:19:5'): check ci ──────────────────────────────────
Expected `ci_out$print` to have names `c("msg_pre", "obj", "msg_post")`.
Differences:
`actual` is NULL
`expected` is a character vector ('msg_pre', 'obj', 'msg_post')
── Error ('test-check-ci.R:20:5'): check ci ────────────────────────────────────
Error in `ci_out$print$msg_pre`: $ operator is invalid for atomic vectors
Backtrace:
▆
1. └─testthat::expect_length(ci_out$print$msg_pre, 1L) at test-check-ci.R:20:5
2. └─testthat::quasi_label(enquo(object))
3. └─rlang::eval_bare(expr, quo_get_env(quo))
[ FAIL 5 | WARN 0 | SKIP 22 | PASS 115 ]
Deleting unused snapshots: 'extra-checks/checks-extra.html',
'extra-checks/checks-extra.md', 'extra-checks/checks-print.md',
'github/pkgcheck.yaml', 'github/with_inputs.yaml', 'pkgcheck/checks0.html',
'pkgcheck/checks0.md', 'pkgcheck/checks1.html', and 'pkgcheck/checks1.md'
Error:
! Test failures.
Execution halted
Flavor: r-oldrel-macos-x86_64