Last updated on 2026-09-25 03:01:01 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.5 | 12.75 | 128.76 | 141.51 | OK | |
| r-devel-linux-x86_64-debian-gcc | 1.1.5 | 10.97 | 91.84 | 102.81 | OK | |
| r-devel-linux-x86_64-fedora-clang | 1.1.5 | 11.00 | 86.58 | 97.58 | OK | |
| r-devel-linux-x86_64-fedora-gcc | 1.1.5 | 10.00 | 90.02 | 100.02 | OK | |
| r-devel-windows-x86_64 | 1.1.5 | 17.00 | 156.00 | 173.00 | OK | |
| r-patched-linux-x86_64 | 1.1.5 | 10.94 | 116.84 | 127.78 | OK | |
| r-release-linux-x86_64 | 1.1.5 | 12.99 | 117.04 | 130.03 | OK | |
| r-release-macos-arm64 | 1.1.5 | 4.00 | 50.00 | 54.00 | OK | |
| r-release-macos-x86_64 | 1.1.5 | 10.00 | 175.00 | 185.00 | OK | |
| r-release-windows-x86_64 | 1.1.5 | 16.00 | 136.00 | 152.00 | OK | |
| r-oldrel-macos-arm64 | 1.1.5 | OK | ||||
| r-oldrel-macos-x86_64 | 1.1.5 | 9.00 | 168.00 | 177.00 | OK | |
| r-oldrel-windows-x86_64 | 1.1.5 | 20.00 | 176.00 | 196.00 | ERROR |
Version: 1.1.5
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building 'refseqR.Rmd' using rmarkdown
Quitting from refseqR.Rmd:102-107 [unnamed-chunk-9]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error:
! HTTP failure: 500
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd">
<html>
<head>
<title>NCBI/eutils102 - WWW Error 500 Diagnostic</title>
<style type="text/css">
h1.error {color: red; font-size: 40pt}
div.diags {text-indent: 0.5in }
</style>
</head>
<body>
<h1>Server Error</h1>
<p>Your request could not be processed due to a problem on
our Web server. This could be a transient problem, please
try the query again. If it doesn't clear up within a
reasonable period of time, e-mail a short description of your
query and the diagnostic information shown below to:</p>
<p>
pubmed@nlm.nih.gov - for problems with PubMed<br/>
webadmin@ncbi.nlm.nih.gov - for problems with other services<br/>
</p>
<p>Thank you for your assistance. We will try to fix the
problem as soon as possible.
</p>
<hr/>
<p>
Diagnostic Information:</p>
<div class="diags">Error: 500</div>
<div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = n u c c o r e & a m p ; r e t t y p e = f a s t a & a m p ; r e t m o d e = & a m p ; i d = X M _ 0 0 4 4 8 7 7 0 1 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div>
<div class="diags">Client: 130.14.22.22</div>
<div class="diags">Server: eutils102</div>
<div class="diags">Time: Thu Sep 24 00:00:08 EDT 2026</div>
<p>
NOTE: The above is an internal URL which may differ from the one you used to address the page.</p>
<hr/>
<p>Rev. 01/04/08</p>
</body>
</html>
---
Backtrace:
▆
1. └─rentrez::entrez_fetch(db = "nuccore", id = transcript, rettype = "fasta")
2. ├─base::do.call(make_entrez_query, args)
3. └─rentrez (local) `<fn>`(...)
4. └─rentrez:::entrez_check(response)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'refseqR.Rmd' failed with diagnostics:
HTTP failure: 500
<!DOCTYPE html PUBLIC "-//W3C//DTD XHTML 1.1//EN" "http://www.w3.org/TR/xhtml11/DTD/xhtml11.dtd">
<html>
<head>
<title>NCBI/eutils102 - WWW Error 500 Diagnostic</title>
<style type="text/css">
h1.error {color: red; font-size: 40pt}
div.diags {text-indent: 0.5in }
</style>
</head>
<body>
<h1>Server Error</h1>
<p>Your request could not be processed due to a problem on
our Web server. This could be a transient problem, please
try the query again. If it doesn't clear up within a
reasonable period of time, e-mail a short description of your
query and the diagnostic information shown below to:</p>
<p>
pubmed@nlm.nih.gov - for problems with PubMed<br/>
webadmin@ncbi.nlm.nih.gov - for problems with other services<br/>
</p>
<p>Thank you for your assistance. We will try to fix the
problem as soon as possible.
</p>
<hr/>
<p>
Diagnostic Information:</p>
<div class="diags">Error: 500</div>
<div class="diags">URL: h t t p : / / e x t - h t t p - e u t i l s . l i n k e r d . n c b i . n l m . n i h . g o v / e n t r e z / e u t i l s / e f e t c h . f c g i ? d b = n u c c o r e & a m p ; r e t t y p e = f a s t a & a m p ; r e t m o d e = & a m p ; i d = X M _ 0 0 4 4 8 7 7 0 1 & a m p ; e m a i l = d a v i d . w i n t e r 4 0 g m a i l . c o m & a m p ; t o o l = r e n t r e z </div>
<div class="diags">Client: 130.14.22.22</div>
<div class="diags">Server: eutils102</div>
<div class="diags">Time: Thu Sep 24 00:00:08 EDT 2026</div>
<p>
NOTE: The above is an internal URL which may differ from the one you used to address the page.</p>
<hr/>
<p>Rev. 01/04/08</p>
</body>
</html>
--- failed re-building 'refseqR.Rmd'
SUMMARY: processing the following file failed:
'refseqR.Rmd'
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-windows-x86_64