Last updated on 2026-02-14 02:53:17 CET.
| Package | ERROR | NOTE | OK |
|---|---|---|---|
| fam.recrisk | 14 | ||
| haplo.stats | 3 | 1 | 10 |
| kinship2 | 14 | ||
| pedgene | 4 | 10 | |
| pleio | 2 | 12 | |
| regmed | 14 | ||
| smartDesign | 14 | ||
| vcpen | 14 |
Current CRAN status: OK: 14
Current CRAN status: ERROR: 3, NOTE: 1, OK: 10
Version: 1.9.7
Check: relative paths in package URLs
Result: NOTE
Checking relative paths failed with message:
error in inferior call:
Failed to locate ‘weave’ output file ‘manualHaploStats.pdf’ or ‘manualHaploStats.html’ for vignette with name ‘manualHaploStats’ and engine ‘R.rsp::asis’. The following files exist in working directory ‘/home/hornik/tmp/R.check/r-devel-clang/Work/build/Packages/haplo.stats/doc’: ‘GPL.txt’ (15145 bytes), ‘LICENSE.mayo’ (1024 bytes), ‘haplostats.Rnw’ (170 bytes), ‘haplostats.pdf’ (439058 bytes), ‘index.html’ (1942 bytes), ‘manualHaploStats.pdf.asis’ (170 bytes), ‘manualHaploStats.rnwsave’ (94258 bytes)
Flavor: r-devel-linux-x86_64-debian-clang
Version: 1.9.8.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘haplostats.Rmd’ using rmarkdown
Quitting from haplostats.Rmd:1216-1224 [anovaGLM]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `anova.haplo.glmlist()`:
! models were not all fitted to the same size of dataset
---
Backtrace:
▆
1. └─haplo.stats::anova.haplo.glm(glmfit.gaus, fit.gaus)
2. └─haplo.stats:::anova.haplo.glmlist(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'haplostats.Rmd' failed with diagnostics:
models were not all fitted to the same size of dataset
--- failed re-building ‘haplostats.Rmd’
SUMMARY: processing the following file failed:
‘haplostats.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-devel-macos-arm64
Version: 1.9.8.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘haplostats.Rmd’ using rmarkdown
2026-02-14 12:30:22.613 R[14196:777905] XType: Using static font registry.
Quitting from haplostats.Rmd:1216-1224 [anovaGLM]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `anova.haplo.glmlist()`:
! models were not all fitted to the same size of dataset
---
Backtrace:
▆
1. └─haplo.stats::anova.haplo.glm(glmfit.gaus, fit.gaus)
2. └─haplo.stats:::anova.haplo.glmlist(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'haplostats.Rmd' failed with diagnostics:
models were not all fitted to the same size of dataset
--- failed re-building ‘haplostats.Rmd’
SUMMARY: processing the following file failed:
‘haplostats.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-release-macos-arm64
Version: 1.9.8.2
Check: re-building of vignette outputs
Result: ERROR
Error(s) in re-building vignettes:
--- re-building ‘haplostats.Rmd’ using rmarkdown
2026-02-14 12:20:56.661 R[35206:370276] XType: Using static font registry.
Quitting from haplostats.Rmd:1216-1224 [anovaGLM]
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
<error/rlang_error>
Error in `anova.haplo.glmlist()`:
! models were not all fitted to the same size of dataset
---
Backtrace:
▆
1. └─haplo.stats::anova.haplo.glm(glmfit.gaus, fit.gaus)
2. └─haplo.stats:::anova.haplo.glmlist(...)
~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~
Error: processing vignette 'haplostats.Rmd' failed with diagnostics:
models were not all fitted to the same size of dataset
--- failed re-building ‘haplostats.Rmd’
SUMMARY: processing the following file failed:
‘haplostats.Rmd’
Error: Vignette re-building failed.
Execution halted
Flavor: r-oldrel-macos-arm64
Current CRAN status: OK: 14
Current CRAN status: ERROR: 4, OK: 10
Version: 4.1
Check: package dependencies
Result: ERROR
Package required but not available: ‘Pedixplorer’
See section ‘The DESCRIPTION file’ in the ‘Writing R Extensions’
manual.
Flavors: r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Current CRAN status: NOTE: 2, OK: 12
Version: 1.9
Check: CRAN incoming feasibility
Result: NOTE
Maintainer: ‘Jason Sinnwell <sinnwell.jason@mayo.edu>’
No Authors@R field in DESCRIPTION.
Please add one, modifying
Authors@R: c(person(given = c("Daniel", "J"),
family = "Schaid",
role = "aut"),
person(given = "Jason",
family = "Sinnwell",
role = "cre",
email = "sinnwell.jason@mayo.edu"))
as necessary.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: OK: 14