o2ools: Tools for 'outbreaker2'

Streamlines the post-processing, summarization, and visualization of 'outbreaker2' output via a suite of helper functions. Facilitates tidy manipulation of posterior samples, integration with case metadata, generation of diagnostic plots and summary statistics.

Version:	0.0.1
Depends:	R (≥ 3.5)
Suggests:	knitr, rmarkdown, testthat (≥ 3.0.0), outbreaker2, incidence2, mixtree, epicontacts, dplyr, tidyr, furrr, ggplot2, igraph, tidygraph, ggraph
Published:	2025-06-06
DOI:	10.32614/CRAN.package.o2ools
Author:	Cyril Geismar [aut, cre]
Maintainer:	Cyril Geismar <c.geismar21 at imperial.ac.uk>
BugReports:	https://github.com/CyGei/o2ools/issues
License:	MIT + file LICENSE
URL:	https://github.com/CyGei/o2ools, https://cygei.github.io/o2ools/
NeedsCompilation:	no
Materials:	README, NEWS
CRAN checks:	o2ools results

Documentation:

Reference manual:	o2ools.html , o2ools.pdf
Vignettes:	my-vignette-name (source, R code)

Downloads:

Package source:	o2ools_0.0.1.tar.gz
Windows binaries:	r-devel: o2ools_0.0.1.zip, r-release: o2ools_0.0.1.zip, r-oldrel: o2ools_0.0.1.zip
macOS binaries:	r-release (arm64): o2ools_0.0.1.tgz, r-oldrel (arm64): o2ools_0.0.1.tgz, r-release (x86_64): o2ools_0.0.1.tgz, r-oldrel (x86_64): o2ools_0.0.1.tgz

Linking:

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