Last updated on 2025-06-28 01:50:01 CEST.
| Flavor | Version | Tinstall | Tcheck | Ttotal | Status | Flags |
|---|---|---|---|---|---|---|
| r-devel-linux-x86_64-debian-clang | 1.1.0 | 13.22 | 133.47 | 146.69 | NOTE | |
| r-devel-linux-x86_64-debian-gcc | 1.1.0 | 6.61 | 62.52 | 69.13 | ERROR | |
| r-devel-linux-x86_64-fedora-clang | 1.1.0 | 121.46 | ERROR | |||
| r-devel-linux-x86_64-fedora-gcc | 1.1.0 | 166.15 | ERROR | |||
| r-devel-windows-x86_64 | 1.1.0 | 14.00 | 132.00 | 146.00 | NOTE | |
| r-patched-linux-x86_64 | NOTE | |||||
| r-release-linux-x86_64 | 1.1.0 | 12.97 | 122.92 | 135.89 | NOTE | |
| r-release-macos-arm64 | 1.1.0 | 69.00 | OK | |||
| r-release-macos-x86_64 | 1.1.0 | 125.00 | OK | |||
| r-release-windows-x86_64 | 1.1.0 | 15.00 | 135.00 | 150.00 | NOTE | |
| r-oldrel-macos-arm64 | 1.1.0 | 71.00 | OK | |||
| r-oldrel-macos-x86_64 | 1.1.0 | 100.00 | OK | |||
| r-oldrel-windows-x86_64 | 1.1.0 | 20.00 | 170.00 | 190.00 | OK |
Version: 1.1.0
Check: Rd cross-references
Result: NOTE
Found the following Rd file(s) with Rd \link{} targets missing package
anchors:
harmonized_dossier_summarize.Rd: valueType_list
harmonized_dossier_visualize.Rd: valueType_list
Please provide package anchors for all Rd \link{} targets not in the
package itself and the base packages.
Flavors: r-devel-linux-x86_64-debian-clang, r-devel-linux-x86_64-debian-gcc, r-devel-windows-x86_64, r-patched-linux-x86_64, r-release-linux-x86_64, r-release-windows-x86_64
Version: 1.1.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Note: possible error in 'data_dict_evaluate(dataschema, ': unused argument (as_data_dict_mlstr = TRUE)
Note: possible error in 'dataset_evaluate(dataset = pooled_harmonized_dataset, ': unused argument (as_data_dict_mlstr = as_dataschema_mlstr)
See ‘/home/hornik/tmp/R.check/r-devel-gcc/Work/PKGS/Rmonize.Rcheck/00install.out’ for details.
Information on the location(s) of code generating the ‘Note’s can be
obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
to ‘yes’.
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.0
Check: R code for possible problems
Result: NOTE
dataschema_evaluate: possible error in data_dict_evaluate(dataschema,
taxonomy, as_data_dict_mlstr = TRUE): unused argument
(as_data_dict_mlstr = TRUE)
harmonized_dossier_evaluate: possible error in dataset_evaluate(dataset
= pooled_harmonized_dataset, data_dict = dataschema, taxonomy =
taxonomy, as_data_dict_mlstr = as_dataschema_mlstr): unused argument
(as_data_dict_mlstr = as_dataschema_mlstr)
Flavors: r-devel-linux-x86_64-debian-gcc, r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘Rmonize-Ex.R’ failed
The error most likely occurred in:
> base::assign(".ptime", proc.time(), pos = "CheckExEnv")
> ### Name: dataschema_evaluate
> ### Title: Generate an assessment report for a DataSchema
> ### Aliases: dataschema_evaluate
>
> ### ** Examples
>
> {
+
+ # use Rmonize_DEMO provided by the package
+
+ library(dplyr)
+ library(madshapR) # data_dict_filter
+
+ dataschema <-
+ Rmonize_DEMO$`dataschema - final` %>%
+ data_dict_filter("name == 'adm_unique_id'")
+
+ dataschema_evaluate(dataschema)
+
+ }
Attaching package: ‘dplyr’
The following objects are masked from ‘package:stats’:
filter, lag
The following objects are masked from ‘package:base’:
intersect, setdiff, setequal, union
Some changes to functions in the current version of madshapR may require
updates of existing code.
To see which functions have changed, please see
https://cran.r-project.org/web/packages/madshapR/news/news.html
Error in data_dict_evaluate(dataschema, taxonomy, as_data_dict_mlstr = TRUE) :
unused argument (as_data_dict_mlstr = TRUE)
Calls: dataschema_evaluate
Execution halted
Examples with CPU (user + system) or elapsed time > 5s
user system elapsed
as_dataschema_mlstr 4.642 0.069 5.506
Flavor: r-devel-linux-x86_64-debian-gcc
Version: 1.1.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Note: possible error in 'data_dict_evaluate(dataschema, ': unused argument (as_data_dict_mlstr = TRUE)
Note: possible error in 'dataset_evaluate(dataset = pooled_harmonized_dataset, ': unused argument (as_data_dict_mlstr = as_dataschema_mlstr)
See ‘/data/gannet/ripley/R/packages/tests-clang/Rmonize.Rcheck/00install.out’ for details.
Information on the location(s) of code generating the ‘Note’s can be
obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
to ‘yes’.
Flavor: r-devel-linux-x86_64-fedora-clang
Version: 1.1.0
Check: examples
Result: ERROR
Running examples in ‘Rmonize-Ex.R’ failed
The error most likely occurred in:
> ### Name: dataschema_evaluate
> ### Title: Generate an assessment report for a DataSchema
> ### Aliases: dataschema_evaluate
>
> ### ** Examples
>
> {
+
+ # use Rmonize_DEMO provided by the package
+
+ library(dplyr)
+ library(madshapR) # data_dict_filter
+
+ dataschema <-
+ Rmonize_DEMO$`dataschema - final` %>%
+ data_dict_filter("name == 'adm_unique_id'")
+
+ dataschema_evaluate(dataschema)
+
+ }
Attaching package: ‘dplyr’
The following objects are masked from ‘package:stats’:
filter, lag
The following objects are masked from ‘package:base’:
intersect, setdiff, setequal, union
Some changes to functions in the current version of madshapR may require
updates of existing code.
To see which functions have changed, please see
https://cran.r-project.org/web/packages/madshapR/news/news.html
Error in data_dict_evaluate(dataschema, taxonomy, as_data_dict_mlstr = TRUE) :
unused argument (as_data_dict_mlstr = TRUE)
Calls: dataschema_evaluate
Execution halted
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 1.1.0
Check: whether package can be installed
Result: WARN
Found the following significant warnings:
Note: possible error in 'data_dict_evaluate(dataschema, ': unused argument (as_data_dict_mlstr = TRUE)
Note: possible error in 'dataset_evaluate(dataset = pooled_harmonized_dataset, ': unused argument (as_data_dict_mlstr = as_dataschema_mlstr)
See ‘/data/gannet/ripley/R/packages/tests-devel/Rmonize.Rcheck/00install.out’ for details.
Information on the location(s) of code generating the ‘Note’s can be
obtained by re-running with environment variable R_KEEP_PKG_SOURCE set
to ‘yes’.
Flavor: r-devel-linux-x86_64-fedora-gcc