Last updated on 2026-02-22 02:50:56 CET.
| Package | ERROR | WARN | NOTE | OK |
|---|---|---|---|---|
| bindata | 14 | |||
| cclust | 14 | |||
| chron | 14 | |||
| clue | 3 | 11 | ||
| date | 14 | |||
| ISOcodes | 14 | |||
| mlbench | 3 | 11 | ||
| movMF | 1 | 13 | ||
| NLP | 14 | |||
| NLPutils | 14 | |||
| OAIHarvester | 14 | |||
| openNLP | 3 | 11 | ||
| openNLPdata | 3 | 11 | ||
| oz | 14 | |||
| relations | 3 | 3 | 8 | |
| RKEA | 14 | |||
| RKEAjars | 3 | 11 | ||
| Rpoppler | 3 | 11 | ||
| Rsymphony | 2 | 12 | ||
| RWeka | 3 | 4 | 7 | |
| RWekajars | 3 | 11 | ||
| skmeans | 5 | 1 | 8 | |
| slam | 5 | 9 | ||
| tau | 1 | 5 | 8 | |
| textcat | 14 | |||
| tm | 3 | 1 | 2 | 8 |
| tm.plugin.mail | 14 | |||
| tseries | 3 | 2 | 9 | |
| Unicode | 14 | |||
| W3CMarkupValidator | 14 | |||
| wordnet | 3 | 11 |
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: WARN: 3, OK: 11
Version: 0.3-67
Check: Rd files
Result: WARN
GVME.Rd:21: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
GVME_Consensus.Rd:6: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Kinship82.Rd:14: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Kinship82_Consensus.Rd:6: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Phonemes.Rd:14: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
addtree.Rd:30: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_agreement.Rd:45: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_bag.Rd:26: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_consensus.Rd:46: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_dissimilarity.Rd:43: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_fuzziness.Rd:46: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_medoid.Rd:24: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_pam.Rd:20: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_pclust.Rd:59: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
cl_validity.Rd:40: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
kmedoids.Rd:35: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
l1_fit_ultrametric.Rd:35: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
lattice.Rd:81: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
ls_fit_addtree.Rd:45: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
ls_fit_sum_of_ultrametrics.Rd:34: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
ls_fit_ultrametric.Rd:36: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
pclust.Rd:90: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
solve_LSAP.Rd:36: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
sumt.Rd:75: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
problems found in ‘GVME.Rd’, ‘GVME_Consensus.Rd’, ‘Kinship82.Rd’, ‘Kinship82_Consensus.Rd’, ‘Phonemes.Rd’, ‘addtree.Rd’, ‘cl_agreement.Rd’, ‘cl_bag.Rd’, ‘cl_consensus.Rd’, ‘cl_dissimilarity.Rd’, ‘cl_fuzziness.Rd’, ‘cl_medoid.Rd’, ‘cl_pam.Rd’, ‘cl_pclust.Rd’, ‘cl_validity.Rd’, ‘kmedoids.Rd’, ‘l1_fit_ultrametric.Rd’, ‘lattice.Rd’, ‘ls_fit_addtree.Rd’, ‘ls_fit_sum_of_ultrametrics.Rd’, ‘ls_fit_ultrametric.Rd’, ‘pclust.Rd’, ‘solve_LSAP.Rd’, ‘sumt.Rd’
Flavors: r-devel-macos-arm64, r-devel-windows-x86_64
Version: 0.3-67
Check: Rd files
Result: WARN
prepare_Rd: ./man/GVME.Rd:21: unknown macro '\bibcitet'
prepare_Rd: ./man/GVME.Rd:24: unknown macro '\bibcitet'
checkRd: (-1) GVME.Rd:21: Lost braces
21 | See \bibcitet{|Gordon+Vichi:2001|page 230}, for more details.
| ^
checkRd: (-1) GVME.Rd:24: Lost braces
24 | Table 1 in \bibcitet{Gordon+Vichi:2001}.
| ^
prepare_Rd: ./man/GVME_Consensus.Rd:6: unknown macro '\bibcitet'
prepare_Rd: ./man/GVME_Consensus.Rd:15: unknown macro '\bibcitet'
prepare_Rd: ./man/GVME_Consensus.Rd:20: unknown macro '\bibcitet'
prepare_Rd: ./man/GVME_Consensus.Rd:21: unknown macro '\bibcitet'
prepare_Rd: ./man/GVME_Consensus.Rd:25: unknown macro '\bibcitet'
checkRd: (-1) GVME_Consensus.Rd:6: Lost braces
6 | partition data given in \bibcitet{Gordon+Vichi:2001}.
| ^
checkRd: (-1) GVME_Consensus.Rd:15: Lost braces
15 | macroeconomic partition data in \bibcitet{Gordon+Vichi:2001}, which are
| ^
checkRd: (-1) GVME_Consensus.Rd:20: Lost braces
20 | in \bibcitet{Gordon+Vichi:2001} and the approach in
| ^
checkRd: (-1) GVME_Consensus.Rd:21: Lost braces
21 | \bibcitet{Sato+Sato:1994},
| ^
checkRd: (-1) GVME_Consensus.Rd:25: Lost braces
25 | Tables 4 and 5 in \bibcitet{Gordon+Vichi:2001}.
| ^
prepare_Rd: ./man/Kinship82.Rd:14: unknown macro '\bibcitet'
prepare_Rd: ./man/Kinship82.Rd:18: unknown macro '\bibcitet'
prepare_Rd: ./man/Kinship82.Rd:23: unknown macro '\bibcitet'
prepare_Rd: ./man/Kinship82.Rd:29: unknown macro '\bibcitet'
checkRd: (-1) Kinship82.Rd:14: Lost braces
14 | \bibcitet{Rosenberg+Kim:1975} describe an experiment where perceived
| ^
checkRd: (-1) Kinship82.Rd:18: Lost braces
18 | \bibcitet{Arabie+Carroll+DeSarbo:1987}, and are also contained in file
| ^
checkRd: (-1) Kinship82.Rd:23: Lost braces
23 | \bibcitet{Rosenberg:1982}.
| ^
checkRd: (-1) Kinship82.Rd:29: Lost braces
29 | Table 7.1 in \bibcitet{Rosenberg:1982}, with the \dQuote{nephew} and
| ^
prepare_Rd: ./man/Kinship82_Consensus.Rd:6: unknown macro '\bibcitet'
prepare_Rd: ./man/Kinship82_Consensus.Rd:16: unknown macro '\bibcitet'
prepare_Rd: ./man/Kinship82_Consensus.Rd:17: unknown macro '\bibcitet'
prepare_Rd: ./man/Kinship82_Consensus.Rd:21: unknown macro '\bibcitet'
checkRd: (-1) Kinship82_Consensus.Rd:6: Lost braces
6 | kinship terms partition data given in \bibcitet{Gordon+Vichi:2001}.
| ^
checkRd: (-1) Kinship82_Consensus.Rd:16: Lost braces
16 | applying models 1, 2, and 3 in \bibcitet{Gordon+Vichi:2001} to the
| ^
checkRd: (-1) Kinship82_Consensus.Rd:17: Lost braces
17 | kinship terms partition data in \bibcitet{Rosenberg:1982}, which are
| ^
checkRd: (-1) Kinship82_Consensus.Rd:21: Lost braces
21 | Table 6 in \bibcitet{Gordon+Vichi:2001}.
| ^
prepare_Rd: ./man/Phonemes.Rd:14: unknown macro '\bibcitet'
checkRd: (-1) Phonemes.Rd:14: Lost braces
14 | \bibcitet{Miller+Nicely:1955}
| ^
prepare_Rd: ./man/addtree.Rd:30: unknown macro '\bibcitet'
checkRd: (-1) addtree.Rd:30: Lost braces
30 | See, e.g., \bibcitet{Barthélemy+Guénoche:1991} for more details on
| ^
prepare_Rd: ./man/cl_agreement.Rd:45: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:53: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:54: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:58: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:59: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:62: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:68: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:78: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_agreement.Rd:99: unknown macro '\bibcitet'
checkRd: (-1) cl_agreement.Rd:45: Lost braces
45 | See \bibcitet{Dimitriadou+Weingessel+Hornik:2002}.}
| ^
checkRd: (-1) cl_agreement.Rd:53: Lost braces
53 | both partitions), see \bibcitet{Rand:1971} or
| ^
checkRd: (-1) cl_agreement.Rd:54: Lost braces
54 | \bibcitet{|R:Gordon:1999|page 198}.
| ^
checkRd: (-1) cl_agreement.Rd:58: Lost braces
58 | chance, see \bibcitet{Hubert+Arabie:1985} or
| ^
checkRd: (-1) cl_agreement.Rd:59: Lost braces
59 | \bibcitet{|R:Gordon:1999|page 198}.
| ^
checkRd: (-1) cl_agreement.Rd:62: Lost braces
62 | \bibcitet{Strehl+Ghosh:2002}.
| ^
checkRd: (-1) cl_agreement.Rd:68: Lost braces
68 | see \bibcitet{Katz+Powell:1953}. For soft partitions, (currently) the
| ^
checkRd: (-1) cl_agreement.Rd:78: Lost braces
78 | \item{\code{"FM"}}{the index of \bibcitet{Fowlkes+Mallows:1983}, i.e.,
| ^
checkRd: (-1) cl_agreement.Rd:99: Lost braces
99 | \bibcitet{Tibshirani+Walther:2005}: the minimum, over all classes
| ^
prepare_Rd: ./man/cl_bag.Rd:26: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_bag.Rd:53: unknown macro '\bibcitet'
checkRd: (-1) cl_bag.Rd:26: Lost braces
26 | \bibcitet{Dudoit+Fridlyand:2003}.}
| ^
checkRd: (-1) cl_bag.Rd:53: Lost braces
53 | \bibcitet{Leisch:1999} and implemented by function
| ^
prepare_Rd: ./man/cl_consensus.Rd:46: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_consensus.Rd:96: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_consensus.Rd:107: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_consensus.Rd:164: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_consensus.Rd:242: unknown macro '\bibcitet'
checkRd: (-1) cl_consensus.Rd:46: Lost braces
46 | See also \bibcitet{R:Gordon:1999} for more information.
| ^
checkRd: (-1) cl_consensus.Rd:96: Lost braces
96 | model} in \bibcitet{Gordon+Vichi:2001} for minimizing \eqn{L}
| ^
checkRd: (-1) cl_consensus.Rd:107: Lost braces
107 | \bibcitet{Dimitriadou+Weingessel+Hornik:2002} for (approximately)
| ^
checkRd: (-1) cl_consensus.Rd:164: Lost braces
164 | model} in \bibcitet{Gordon+Vichi:2001} for minimizing \eqn{L} with
| ^
checkRd: (-1) cl_consensus.Rd:242: Lost braces
242 | the majority consensus tree of \bibcitet{Margush+McMorris:1981},
| ^
prepare_Rd: ./man/cl_dissimilarity.Rd:43: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:67: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:72: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:79: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:104: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:109: unknown macro '\bibcitep'
prepare_Rd: ./man/cl_dissimilarity.Rd:112: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:116: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:128: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:146: unknown macro '\bibcitep'
prepare_Rd: ./man/cl_dissimilarity.Rd:150: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:153: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:191: unknown macro '\bibcitep'
prepare_Rd: ./man/cl_dissimilarity.Rd:195: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_dissimilarity.Rd:208: unknown macro '\bibcitet'
checkRd: (-1) cl_dissimilarity.Rd:43: Lost braces
43 | \eqn{v}. See \bibcitet{Dimitriadou+Weingessel+Hornik:2002}.}
| ^
checkRd: (-1) cl_dissimilarity.Rd:67: Lost braces
67 | \bibcitet{Gordon+Vichi:2001},
| ^
checkRd: (-1) cl_dissimilarity.Rd:72: Lost braces
72 | discussed in \bibcitet{Boorman+Arabie:1972}, with \var{d} one of
| ^
checkRd: (-1) cl_dissimilarity.Rd:79: Lost braces
79 | partition into the other. Introduced in \bibcitet{Rubin:1967}.
| ^
checkRd: (-1) cl_dissimilarity.Rd:104: Lost braces
104 | Introduced in \bibcitet{Rajski:1961}.
| ^
checkRd: (-1) cl_dissimilarity.Rd:109: Lost braces
109 | \eqn{C} distance measures is hard to compute \bibcitep{Day:1981}
| ^
checkRd: (-1) cl_dissimilarity.Rd:112: Lost braces
112 | \bibcitet{Meila:2003}. If
| ^
checkRd: (-1) cl_dissimilarity.Rd:116: Lost braces
116 | \bibcitet{Zhou+Li+Zha:2005},
| ^
checkRd: (-1) cl_dissimilarity.Rd:128: Lost braces
128 | \bibcitet{Zhou+Li+Zha:2005},
| ^
checkRd: (-1) cl_dissimilarity.Rd:146: Lost braces
146 | \bibcitep{Charon+Denoeud+Guénoche:2006},
| ^
checkRd: (-1) cl_dissimilarity.Rd:150: Lost braces
150 | \bibcitet{Day:1981},
| ^
checkRd: (-1) cl_dissimilarity.Rd:153: Lost braces
153 | \emph{partition-distance} in \bibcitet{Gusfield:2002}, and equals
| ^
checkRd: (-1) cl_dissimilarity.Rd:191: Lost braces
191 | \bibcitep{e.g.|Jardine+Sibson:1971|page 107},
| ^
checkRd: (-1) cl_dissimilarity.Rd:195: Lost braces
195 | \bibcitet{Boorman+Olivier:1973}, which are of the form
| ^
checkRd: (-1) cl_dissimilarity.Rd:208: Lost braces
208 | \bibcitet{Mérigot+Durbec+Gaertner:2010}.}
| ^
prepare_Rd: ./man/cl_medoid.Rd:24: unknown macro '\bibcitet'
checkRd: (-1) cl_medoid.Rd:24: Lost braces
24 | See \bibcitet{R:Gordon:1999} for more information.
| ^
prepare_Rd: ./man/cl_pam.Rd:20: unknown macro '\bibcitep'
prepare_Rd: ./man/cl_pam.Rd:46: unknown macro '\bibcitep'
checkRd: (-1) cl_pam.Rd:20: Lost braces
20 | \bibcitep{|Kaufman+Rousseeuw:1990|Chapter 2}
| ^
checkRd: (-1) cl_pam.Rd:46: Lost braces
46 | Such secondary partitions \bibcitep{e.g.|Gordon+Vichi:1998|}
| ^
prepare_Rd: ./man/cl_pclust.Rd:59: unknown macro '\bibcitet'
checkRd: (-1) cl_pclust.Rd:59: Lost braces
59 | \bibcitet{Gaul+Schader:1988}
| ^
prepare_Rd: ./man/cl_validity.Rd:40: unknown macro '\bibcitet'
prepare_Rd: ./man/cl_validity.Rd:42: unknown macro '\bibcitet'
checkRd: (-1) cl_validity.Rd:40: Lost braces
40 | (VAF, e.g., \bibcitet{Hubert+Arabie+Meulman:2006})
| ^
checkRd: (-1) cl_validity.Rd:42: Lost braces
42 | (DEV, e.g., \bibcitet{Smith:2001}).
| ^
prepare_Rd: ./man/kmedoids.Rd:35: unknown macro '\bibcitet'
prepare_Rd: ./man/kmedoids.Rd:42: unknown macro '\bibcitep'
checkRd: (-1) kmedoids.Rd:35: Lost braces
35 | Medoids, see \bibcitet{|Kaufman+Rousseeuw:1990|Chapter 2})
| ^
checkRd: (-1) kmedoids.Rd:42: Lost braces
42 | \bibcitep{e.g.|Gordon+Vichi:1998|[P4']},
| ^
prepare_Rd: ./man/l1_fit_ultrametric.Rd:35: unknown macro '\bibcitep'
prepare_Rd: ./man/l1_fit_ultrametric.Rd:56: unknown macro '\bibcitet'
checkRd: (-1) l1_fit_ultrametric.Rd:35: Lost braces
35 | \bibcitep{Křivánek+Morávek:1986}.
| ^
checkRd: (-1) l1_fit_ultrametric.Rd:56: Lost braces
56 | Reweighted Iterative Projection approach of \bibcitet{Smith:2001},
| ^
prepare_Rd: ./man/lattice.Rd:81: unknown macro '\bibcitet'
checkRd: (-1) lattice.Rd:81: Lost braces
81 | see \bibcitet{Barthélemy+Leclerc+Monjardet:1986}.
| ^
prepare_Rd: ./man/ls_fit_addtree.Rd:45: unknown macro '\bibcitep'
prepare_Rd: ./man/ls_fit_addtree.Rd:46: unknown macro '\bibcitet'
prepare_Rd: ./man/ls_fit_addtree.Rd:51: unknown macro '\bibcitet'
checkRd: (-1) ls_fit_addtree.Rd:45: Lost braces
45 | \bibcitep{Sequential Unconstrained Minimization Technique|Fiacco+McCormick:1968|}
| ^
checkRd: (-1) ls_fit_addtree.Rd:46: Lost braces
46 | approach of \bibcitet{De_Soete:1983}.
| ^
checkRd: (-1) ls_fit_addtree.Rd:51: Lost braces
51 | \bibcitet{Hubert+Arabie:1995} and \bibcitet{Roux:1988}, respectively.
| ^
checkRd: (-1) ls_fit_addtree.Rd:51: Lost braces
51 | \bibcitet{Hubert+Arabie:1995} and \bibcitet{Roux:1988}, respectively.
| ^
prepare_Rd: ./man/ls_fit_sum_of_ultrametrics.Rd:34: unknown macro '\bibcitet'
checkRd: (-1) ls_fit_sum_of_ultrametrics.Rd:34: Lost braces
34 | \bibcitet{Carroll+Pruzansky:1980} which in each step \eqn{t} sequentially
| ^
prepare_Rd: ./man/ls_fit_ultrametric.Rd:36: unknown macro '\bibcitep'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:48: unknown macro '\bibcitep'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:49: unknown macro '\bibcitet'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:50: unknown macro '\bibcitet'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:57: unknown macro '\bibcitet'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:88: unknown macro '\bibcitet'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:122: unknown macro '\bibcitet'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:123: unknown macro '\bibcitet'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:138: unknown macro '\bibinfo'
prepare_Rd: ./man/ls_fit_ultrametric.Rd:139: unknown macro '\bibinfo'
checkRd: (-1) ls_fit_ultrametric.Rd:36: Lost braces
36 | is known to be NP hard \bibcitep{Křivánek+Morávek:1986}.
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:48: Lost braces
48 | \bibcitep{Sequential Unconstrained Minimization Technique|Fiacco+McCormick:1968|}
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:49: Lost braces
49 | approach of \bibcitet{De_Soete:1984a} which in turn simplifies the suggestions
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:50: Lost braces
50 | in \bibcitet{Carroll+Pruzansky:1980}. (See \code{\link{sumt}} for more
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:57: Lost braces
57 | \emph{incomplete}, we follow a suggestion of \bibcitet{De_Soete:1984a}, imputing
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:88: Lost braces
88 | \bibcitet{Hubert+Arabie:1995}. This iteratively projects the current
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:122: Lost braces
122 | suggested by \bibcitet{Roux:1988}, see also
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:123: Lost braces
123 | \bibcitet{Barthélemy+Guénoche:1991}.
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:138: Lost braces
138 | \bibinfo{De_Soete:1984a}{year}{1984a}
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:138: Lost braces
138 | \bibinfo{De_Soete:1984a}{year}{1984a}
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:138: Lost braces
138 | \bibinfo{De_Soete:1984a}{year}{1984a}
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:139: Lost braces
139 | \bibinfo{De_Soete:1984b}{year}{1984b}
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:139: Lost braces
139 | \bibinfo{De_Soete:1984b}{year}{1984b}
| ^
checkRd: (-1) ls_fit_ultrametric.Rd:139: Lost braces
139 | \bibinfo{De_Soete:1984b}{year}{1984b}
| ^
prepare_Rd: ./man/pclust.Rd:90: unknown macro '\bibcitet'
checkRd: (-1) pclust.Rd:90: Lost braces
90 | (e.g., \bibcitet{Bezdek:1981}) is used, which alternates between computing
| ^
Flavor: r-release-linux-x86_64
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: WARN: 3, OK: 11
Version: 2.1-7
Check: Rd files
Result: WARN
BostonHousing.Rd:11: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
BreastCancer.Rd:43: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
DNA.Rd:61: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Glass.Rd:40: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
HouseVotes84.Rd:49: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Ionosphere.Rd:32: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
LetterRecognition.Rd:49: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Ozone.Rd:34: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
PimaIndiansDiabetes.Rd:32: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Satellite.Rd:97: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Servo.Rd:34: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Shuttle.Rd:27: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Sonar.Rd:10: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Soybean.Rd:68: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Vehicle.Rd:60: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Vowel.Rd:26: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Zoo.Rd:24: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
mlbench.friedman1.Rd:13: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
mlbench.friedman2.Rd:16: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
mlbench.friedman3.Rd:16: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
mlbench.threenorm.Rd:25: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
mlbench.waveform.Rd:26: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
problems found in ‘BostonHousing.Rd’, ‘BreastCancer.Rd’, ‘DNA.Rd’, ‘Glass.Rd’, ‘HouseVotes84.Rd’, ‘Ionosphere.Rd’, ‘LetterRecognition.Rd’, ‘Ozone.Rd’, ‘PimaIndiansDiabetes.Rd’, ‘Satellite.Rd’, ‘Servo.Rd’, ‘Shuttle.Rd’, ‘Sonar.Rd’, ‘Soybean.Rd’, ‘Vehicle.Rd’, ‘Vowel.Rd’, ‘Zoo.Rd’, ‘mlbench.friedman1.Rd’, ‘mlbench.friedman2.Rd’, ‘mlbench.friedman3.Rd’, ‘mlbench.threenorm.Rd’, ‘mlbench.waveform.Rd’
Flavors: r-devel-macos-arm64, r-devel-windows-x86_64
Version: 2.1-7
Check: Rd files
Result: WARN
prepare_Rd: ./man/BostonHousing.Rd:11: unknown macro '\bibcitet'
prepare_Rd: ./man/BostonHousing.Rd:44: unknown macro '\bibcitep'
prepare_Rd: ./man/BostonHousing.Rd:53: unknown macro '\bibinfo'
prepare_Rd: ./man/BostonHousing.Rd:55: unknown macro '\bibinfo'
checkRd: (-1) BostonHousing.Rd:11: Lost braces
11 | data by \bibcitet{Harrison+Rubinfeld:1978}, the dataf rame
| ^
checkRd: (-1) BostonHousing.Rd:44: Lost braces
44 | Learning Databases \bibcitep{Blake+Merz:1998} and no longer seem to be
| ^
checkRd: (-1) BostonHousing.Rd:53: Lost braces
53 | \bibinfo{Gilley+Pace:1996}{note}{[Provided corrections and examined
| ^
checkRd: (-1) BostonHousing.Rd:53: Lost braces
53 | \bibinfo{Gilley+Pace:1996}{note}{[Provided corrections and examined
| ^
checkRd: (-1) BostonHousing.Rd:53-54: Lost braces
53 | \bibinfo{Gilley+Pace:1996}{note}{[Provided corrections and examined
| ^
checkRd: (-1) BostonHousing.Rd:55: Lost braces
55 | \bibinfo{Pace+Gilley:1997}{note}{[Added georeferencing and spatial
| ^
checkRd: (-1) BostonHousing.Rd:55: Lost braces
55 | \bibinfo{Pace+Gilley:1997}{note}{[Added georeferencing and spatial
| ^
checkRd: (-1) BostonHousing.Rd:55-56: Lost braces
55 | \bibinfo{Pace+Gilley:1997}{note}{[Added georeferencing and spatial
| ^
prepare_Rd: ./man/BreastCancer.Rd:43: unknown macro '\bibcitep'
checkRd: (-1) BreastCancer.Rd:43: Lost braces
43 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Glass.Rd:40: unknown macro '\bibcitep'
checkRd: (-1) Glass.Rd:40: Lost braces
40 | Learning Databases \bibcitep{Blake+Merz:1998} and were converted to
| ^
prepare_Rd: ./man/HouseVotes84.Rd:49: unknown macro '\bibcitep'
checkRd: (-1) HouseVotes84.Rd:49: Lost braces
49 | Learning Databases \bibcitep{Blake+Merz:1998} and were converted to
| ^
prepare_Rd: ./man/Ionosphere.Rd:32: unknown macro '\bibcitep'
checkRd: (-1) Ionosphere.Rd:32: Lost braces
32 | Learning Databases \bibcitep{Blake+Merz:1998} and were converted to
| ^
prepare_Rd: ./man/LetterRecognition.Rd:49: unknown macro '\bibcitep'
checkRd: (-1) LetterRecognition.Rd:49: Lost braces
49 | Learning Databases \bibcitep{Blake+Merz:1998} and were converted to
| ^
prepare_Rd: ./man/PimaIndiansDiabetes.Rd:32: unknown macro '\bibcitet'
prepare_Rd: ./man/PimaIndiansDiabetes.Rd:43: unknown macro '\bibcitep'
checkRd: (-1) PimaIndiansDiabetes.Rd:32: Lost braces
32 | \bibcitet{Wahba+Gu+Wang:1995} and \bibcitet{Ripley:1996}.
| ^
checkRd: (-1) PimaIndiansDiabetes.Rd:32: Lost braces
32 | \bibcitet{Wahba+Gu+Wang:1995} and \bibcitet{Ripley:1996}.
| ^
checkRd: (-1) PimaIndiansDiabetes.Rd:43: Lost braces
43 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Satellite.Rd:97: unknown macro '\bibcitep'
checkRd: (-1) Satellite.Rd:97: Lost braces
97 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Servo.Rd:34: unknown macro '\bibcitep'
checkRd: (-1) Servo.Rd:34: Lost braces
34 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Shuttle.Rd:27: unknown macro '\bibcitep'
checkRd: (-1) Shuttle.Rd:27: Lost braces
27 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Sonar.Rd:10: unknown macro '\bibcitet'
prepare_Rd: ./man/Sonar.Rd:38: unknown macro '\bibcitep'
checkRd: (-1) Sonar.Rd:10: Lost braces
10 | \bibcitet{Gorman+Sejnowski:1988} in their
| ^
checkRd: (-1) Sonar.Rd:38: Lost braces
38 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Soybean.Rd:68: unknown macro '\bibcitet'
prepare_Rd: ./man/Soybean.Rd:73: unknown macro '\bibcitep'
checkRd: (-1) Soybean.Rd:68: Lost braces
68 | \item Source: \bibcitet{Michalski+Chilausky:1980}
| ^
checkRd: (-1) Soybean.Rd:73: Lost braces
73 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Vehicle.Rd:60: unknown macro '\bibcitep'
checkRd: (-1) Vehicle.Rd:60: Lost braces
60 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Vowel.Rd:26: unknown macro '\bibcitep'
checkRd: (-1) Vowel.Rd:26: Lost braces
26 | Databases \bibcitep{Blake+Merz:1998} and were converted to R format by
| ^
prepare_Rd: ./man/Zoo.Rd:24: unknown macro '\bibcitep'
checkRd: (-1) Zoo.Rd:24: Lost braces
24 | Repository of Machine Learning Databases \bibcitep{Blake+Merz:1998}
| ^
prepare_Rd: ./man/mlbench.friedman1.Rd:13: unknown macro '\bibcitet'
checkRd: (-1) mlbench.friedman1.Rd:13: Lost braces
13 | \bibcitet{Friedman:1991} and \bibcitet{Breiman:1996}.
| ^
checkRd: (-1) mlbench.friedman1.Rd:13: Lost braces
13 | \bibcitet{Friedman:1991} and \bibcitet{Breiman:1996}.
| ^
prepare_Rd: ./man/mlbench.friedman2.Rd:16: unknown macro '\bibcitet'
checkRd: (-1) mlbench.friedman2.Rd:16: Lost braces
16 | \bibcitet{Friedman:1991} and \bibcitet{Breiman:1996}.
| ^
checkRd: (-1) mlbench.friedman2.Rd:16: Lost braces
16 | \bibcitet{Friedman:1991} and \bibcitet{Breiman:1996}.
| ^
prepare_Rd: ./man/mlbench.friedman3.Rd:16: unknown macro '\bibcitet'
checkRd: (-1) mlbench.friedman3.Rd:16: Lost braces
16 | \bibcitet{Friedman:1991} and \bibcitet{Breiman:1996}.
| ^
checkRd: (-1) mlbench.friedman3.Rd:16: Lost braces
16 | \bibcitet{Friedman:1991} and \bibcitet{Breiman:1996}.
| ^
prepare_Rd: ./man/mlbench.waveform.Rd:26: unknown macro '\bibcitep'
checkRd: (-1) mlbench.waveform.Rd:26: Lost braces
26 | Repository of Machine Learning Databases \bibcitep{Blake+Merz:1998}.
| ^
Flavor: r-release-linux-x86_64
Current CRAN status: WARN: 1, OK: 13
Version: 0.2-10
Check: Rd files
Result: WARN
prepare_Rd: ./man/movMF.Rd:48: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:51: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:72: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:74: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:76: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:80: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:81: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:83: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:84: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:87: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:89: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:91: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:94: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:102: unknown macro '\bibcitet'
prepare_Rd: ./man/movMF.Rd:104: unknown macro '\bibcitet'
checkRd: (-1) movMF.Rd:48: Lost braces
48 | \bibcitet{movMF::Banerjee+Dhillon+Ghosh:2005}. For
| ^
checkRd: (-1) movMF.Rd:51: Lost braces
51 | \bibcitet{movMF::Celeux+Govaert:1992}.
| ^
checkRd: (-1) movMF.Rd:72: Lost braces
72 | \bibcitet{movMF::Banerjee+Dhillon+Ghosh:2005}.}
| ^
checkRd: (-1) movMF.Rd:74: Lost braces
74 | \bibcitet{movMF::Tanabe+Fukumizu+Oba:2007} with starting point for
| ^
checkRd: (-1) movMF.Rd:76: Lost braces
76 | \bibcitet{movMF::Tanabe+Fukumizu+Oba:2007} implied by a given
| ^
checkRd: (-1) movMF.Rd:80: Lost braces
80 | \bibcitet{movMF::Sra:2012} starting in the approximation of
| ^
checkRd: (-1) movMF.Rd:81: Lost braces
81 | \bibcitet{movMF::Banerjee+Dhillon+Ghosh:2005}.}
| ^
checkRd: (-1) movMF.Rd:83: Lost braces
83 | suggested in \bibcitet{movMF::Song+Liu+Wang:2012} starting in the
| ^
checkRd: (-1) movMF.Rd:84: Lost braces
84 | approximation of \bibcitet{movMF::Banerjee+Dhillon+Ghosh:2005}.}
| ^
checkRd: (-1) movMF.Rd:87: Lost braces
87 | \bibcitet{movMF::Hornik+Grün:2014}.}
| ^
checkRd: (-1) movMF.Rd:89: Lost braces
89 | approximation of \bibcitet{movMF::Hornik+Grün:2014}.}
| ^
checkRd: (-1) movMF.Rd:91: Lost braces
91 | approximation of \bibcitet{movMF::Hornik+Grün:2014}.}
| ^
checkRd: (-1) movMF.Rd:94: Lost braces
94 | outlined in \bibcitet{movMF::Press+Teukolsky+Vetterling:1992}.
| ^
checkRd: (-1) movMF.Rd:102: Lost braces
102 | \bibcitet{|movMF::Atkinson:1989|pp.\\\\\\sspace{}62--64}.
| ^
checkRd: (-1) movMF.Rd:104: Lost braces
104 | \bibcitet{movMF::Hornik+Grün:2013}.}
| ^
prepare_Rd: ./man/movMF_distribution.Rd:68: unknown macro '\bibcitet'
checkRd: (-1) movMF_distribution.Rd:68: Lost braces
68 | distributions, using Algorithm VM* in \bibcitet{movMF::Wood:1994} for
| ^
Flavor: r-release-linux-x86_64
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: NOTE: 3, OK: 11
Version: 0.2-7
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘openNLPmodels.en’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 3, OK: 11
Version: 1.5.3-5
Check: installed package size
Result: NOTE
installed size is 7.2Mb
sub-directories of 1Mb or more:
java 1.2Mb
models 6.0Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: OK: 14
Current CRAN status: WARN: 3, NOTE: 3, OK: 8
Version: 0.6-16
Check: Rd files
Result: WARN
Cetacea.Rd:17: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Felines.Rd:36: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
SVMBench.Rd:38: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
algebra.Rd:54: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
closure.Rd:60: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
components.Rd:69: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
consensus.Rd:43: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
dissimilarity.Rd:53: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
pclust.Rd:43: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
predicates.Rd:242: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
reduction.Rd:84: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
relation.Rd:110: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
scores.Rd:39: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
trace.Rd:25: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
problems found in ‘Cetacea.Rd’, ‘Felines.Rd’, ‘SVMBench.Rd’, ‘algebra.Rd’, ‘closure.Rd’, ‘components.Rd’, ‘consensus.Rd’, ‘dissimilarity.Rd’, ‘pclust.Rd’, ‘predicates.Rd’, ‘reduction.Rd’, ‘relation.Rd’, ‘scores.Rd’, ‘trace.Rd’
Flavors: r-devel-macos-arm64, r-devel-windows-x86_64
Version: 0.6-16
Check: Rd files
Result: WARN
prepare_Rd: ./man/SVMBench.Rd:38: unknown macro '\bibcitet'
prepare_Rd: ./man/SVMBench.Rd:40: unknown macro '\bibcitet'
prepare_Rd: ./man/SVMBench.Rd:52: unknown macro '\bibcitet'
checkRd: (-1) SVMBench.Rd:38: Lost braces
38 | See \bibcitet{Meyer+Leisch+Hornik:2003} for details on the
| ^
checkRd: (-1) SVMBench.Rd:40: Lost braces
40 | \bibcitet{Hornik+Meyer:2007} for the pairwise comparisons.
| ^
checkRd: (-1) SVMBench.Rd:52: Lost braces
52 | See \bibcitet{Hornik+Meyer:2007} for details on the meta-analysis.
| ^
prepare_Rd: ./man/algebra.Rd:54: unknown macro '\bibcitet'
checkRd: (-1) algebra.Rd:54: Lost braces
54 | \bibcitet{Codd:1970}.
| ^
prepare_Rd: ./man/consensus.Rd:43: unknown macro '\bibcitet'
prepare_Rd: ./man/consensus.Rd:53: unknown macro '\bibcitet'
prepare_Rd: ./man/consensus.Rd:68: unknown macro '\bibcitet'
prepare_Rd: ./man/consensus.Rd:85: unknown macro '\bibcitet'
prepare_Rd: ./man/consensus.Rd:100: unknown macro '\bibcitet'
prepare_Rd: ./man/consensus.Rd:140: unknown macro '\bibcitet'
checkRd: (-1) consensus.Rd:43: Lost braces
43 | \dQuote{central relations} in \bibcitet{Régnier:1965}. For \eqn{e = 1}, we
| ^
checkRd: (-1) consensus.Rd:53: Lost braces
53 | \bibcitet{Borda:1781}.
| ^
checkRd: (-1) consensus.Rd:68: Lost braces
68 | \bibcitet{Copeland:1951}.
| ^
checkRd: (-1) consensus.Rd:85: Lost braces
85 | \bibcitet{de_Condorcet:1785}.
| ^
checkRd: (-1) consensus.Rd:100: Lost braces
100 | \item{\code{"CS"}}{the consensus method of \bibcitet{Cook+Seiford:1978}
| ^
checkRd: (-1) consensus.Rd:140: Lost braces
140 | \bibcitet{Hornik+Meyer:2007} for details. The solver employed can be
| ^
prepare_Rd: ./man/dissimilarity.Rd:53: unknown macro '\bibcitet'
prepare_Rd: ./man/dissimilarity.Rd:70: unknown macro '\bibcitet'
prepare_Rd: ./man/dissimilarity.Rd:148: unknown macro '\bibcitet'
prepare_Rd: ./man/dissimilarity.Rd:153: unknown macro '\bibcitet'
checkRd: (-1) dissimilarity.Rd:53: Lost braces
53 | distance function of \bibcitet{Cook+Seiford:1978}.
| ^
checkRd: (-1) dissimilarity.Rd:70: Lost braces
70 | the distance function of \bibcitet{Cook+Kress+Seiford:1986}.
| ^
checkRd: (-1) dissimilarity.Rd:148: Lost braces
148 | rankings introduced in \bibcitet{Emond+Mason:2000}. This uses a
| ^
checkRd: (-1) dissimilarity.Rd:153: Lost braces
153 | \bibcitet{Jabeur+Martel+Khélifa:2004}:
| ^
prepare_Rd: ./man/pclust.Rd:43: unknown macro '\bibcitet'
prepare_Rd: ./man/pclust.Rd:44: unknown macro '\bibcitet'
checkRd: (-1) pclust.Rd:43: Lost braces
43 | \bibcitet{Régnier:1965}) for the classes.
| ^
checkRd: (-1) pclust.Rd:44: Lost braces
44 | This procedure was proposed in \bibcitet{Gaul+Schader:1988} as the
| ^
prepare_Rd: ./man/predicates.Rd:242: unknown macro '\bibcitet'
checkRd: (-1) predicates.Rd:242: Lost braces
242 | e.g., \bibcitet{Fishburn:1972} requires these to be irreflexive.
| ^
prepare_Rd: ./man/relation.Rd:110: unknown macro '\bibcitep'
prepare_Rd: ./man/relation.Rd:111: unknown macro '\bibcitet'
checkRd: (-1) relation.Rd:110: Lost braces
110 | \emph{codual} \bibcitep{Clark:1990}, also known as the \sQuote{dual} in the
| ^
checkRd: (-1) relation.Rd:111: Lost braces
111 | fuzzy preference literature, e.g., \bibcitet{Ovchinnikov:1991}, is the
| ^
prepare_Rd: ./man/scores.Rd:39: unknown macro '\bibcitet'
prepare_Rd: ./man/scores.Rd:61: unknown macro '\bibcitet'
prepare_Rd: ./man/scores.Rd:71: unknown macro '\bibcitet'
prepare_Rd: ./man/scores.Rd:74: unknown macro '\bibcitet'
prepare_Rd: ./man/scores.Rd:78: unknown macro '\bibcitet'
prepare_Rd: ./man/scores.Rd:82: unknown macro '\bibcitet'
checkRd: (-1) scores.Rd:39: Lost braces
39 | (see \bibcitet{Regenwetter+Rykhlevskaia:2004}).
| ^
checkRd: (-1) scores.Rd:61: Lost braces
61 | See \bibcitet{Regenwetter+Rykhlevskaia:2004} for more details on
| ^
checkRd: (-1) scores.Rd:71: Lost braces
71 | See \bibcitet{Barthelemy+Monjardet:1981}.
| ^
checkRd: (-1) scores.Rd:74: Lost braces
74 | See \bibcitet{Borda:1781} and \bibcitet{Kendall:1955}.
| ^
checkRd: (-1) scores.Rd:74: Lost braces
74 | See \bibcitet{Borda:1781} and \bibcitet{Kendall:1955}.
| ^
checkRd: (-1) scores.Rd:78: Lost braces
78 | See \bibcitet{Wei:1952}.
| ^
checkRd: (-1) scores.Rd:82: Lost braces
82 | \bibcitet{Bouyssou:1992}, and also to the Copeland scores.}
| ^
prepare_Rd: ./man/trace.Rd:25: unknown macro '\bibcitet'
checkRd: (-1) trace.Rd:25: Lost braces
25 | See Chapter 2.3 in \bibcitet{Fodor+Roubens:1994} for more information.
| ^
Flavor: r-release-linux-x86_64
Version: 0.6-16
Check: package dependencies
Result: NOTE
Package which this enhances but not available for checking: ‘Rcplex’
Flavors: r-oldrel-macos-arm64, r-oldrel-windows-x86_64
Version: 0.6-15
Check: package dependencies
Result: NOTE
Package which this enhances but not available for checking: ‘Rcplex’
Flavor: r-oldrel-macos-x86_64
Current CRAN status: OK: 14
Current CRAN status: NOTE: 3, OK: 11
Version: 5.0-4
Check: installed package size
Result: NOTE
installed size is 10.8Mb
sub-directories of 1Mb or more:
java 10.8Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 3, OK: 11
Version: 0.1-3
Check: installed package size
Result: NOTE
installed size is 49.3Mb
sub-directories of 1Mb or more:
libs 49.2Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 2, OK: 12
Version: 0.1-33
Check: Rd cross-references
Result: NOTE
Package unavailable to check Rd xrefs: ‘Rglpk’
Flavor: r-oldrel-macos-arm64
Version: 0.1-33
Check: installed package size
Result: NOTE
installed size is 5.8Mb
sub-directories of 1Mb or more:
libs 5.8Mb
Flavor: r-oldrel-windows-x86_64
Current CRAN status: WARN: 3, NOTE: 4, OK: 7
Version: 0.4-47
Check: tests
Result: NOTE
Running ‘data_exchange.R’
Comparing ‘data_exchange.Rout’ to ‘data_exchange.Rout.save’ ...
136c136
< 1 2012-12-12 12:12:12 2012-12-12 12:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
159c159
< 1 2012-12-12 12:12:12 2012-12-12 12:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.4-47
Check: Rd files
Result: WARN
WOW.Rd:23: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_associators.Rd:42: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_classifier_functions.Rd:60: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_classifier_lazy.Rd:50: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_classifier_meta.Rd:66: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_classifier_rules.Rd:57: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_classifier_trees.Rd:69: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_clusterers.Rd:41: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_filters.Rd:38: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_interfaces.Rd:107: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
Weka_stemmers.Rd:23: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
evaluate_Weka_classifier.Rd:53: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
problems found in ‘WOW.Rd’, ‘Weka_associators.Rd’, ‘Weka_classifier_functions.Rd’, ‘Weka_classifier_lazy.Rd’, ‘Weka_classifier_meta.Rd’, ‘Weka_classifier_rules.Rd’, ‘Weka_classifier_trees.Rd’, ‘Weka_clusterers.Rd’, ‘Weka_filters.Rd’, ‘Weka_interfaces.Rd’, ‘Weka_stemmers.Rd’, ‘evaluate_Weka_classifier.Rd’
Flavors: r-devel-macos-arm64, r-devel-windows-x86_64
Version: 0.4-47
Check: tests
Result: NOTE
Running ‘data_exchange.R’ [1s/0s]
Comparing ‘data_exchange.Rout’ to ‘data_exchange.Rout.save’ ...
136c136
< 1 2012-12-12 12:12:12 2012-12-13 01:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
159c159
< 1 2012-12-12 12:12:12 2012-12-13 01:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
Flavor: r-devel-macos-arm64
Version: 0.4-47
Check: Rd files
Result: WARN
prepare_Rd: ./man/Weka_classifier_functions.Rd:60: unknown macro '\bibcitep'
checkRd: (-1) Weka_classifier_functions.Rd:60: Lost braces
60 | \acronym{RBF} kernels \bibcitep{Platt:1998}.
| ^
prepare_Rd: ./man/Weka_classifier_lazy.Rd:50: unknown macro '\bibcitet'
prepare_Rd: ./man/Weka_classifier_lazy.Rd:54: unknown macro '\bibcitet'
checkRd: (-1) Weka_classifier_lazy.Rd:50: Lost braces
50 | \bibcitet{Aha+Kibler+Albert:1991}.
| ^
checkRd: (-1) Weka_classifier_lazy.Rd:54: Lost braces
54 | Bayes as suggested by \bibcitet{Zheng+Webb:2000}.
| ^
prepare_Rd: ./man/Weka_classifier_meta.Rd:66: unknown macro '\bibcitet'
prepare_Rd: ./man/Weka_classifier_meta.Rd:68: unknown macro '\bibcitep'
prepare_Rd: ./man/Weka_classifier_meta.Rd:71: unknown macro '\bibcitep'
prepare_Rd: ./man/Weka_classifier_meta.Rd:73: unknown macro '\bibcitep'
prepare_Rd: ./man/Weka_classifier_meta.Rd:78: unknown macro '\bibcitep'
checkRd: (-1) Weka_classifier_meta.Rd:66: Lost braces
66 | \bibcitet{Freund+Schapire:1996}.
| ^
checkRd: (-1) Weka_classifier_meta.Rd:68: Lost braces
68 | \code{Bagging} provides bagging \bibcitep{Breiman:1996}.
| ^
checkRd: (-1) Weka_classifier_meta.Rd:71: Lost braces
71 | \bibcitep{Friedman+Hastie+Tibshirani:2000}.
| ^
checkRd: (-1) Weka_classifier_meta.Rd:73: Lost braces
73 | \code{MultiBoostAB} implements MultiBoosting \bibcitep{Webb:2000},
| ^
checkRd: (-1) Weka_classifier_meta.Rd:78: Lost braces
78 | \code{Stacking} provides stacking \bibcitep{Wolpert:1992}.
| ^
prepare_Rd: ./man/Weka_classifier_rules.Rd:57: unknown macro '\bibcitet'
prepare_Rd: ./man/Weka_classifier_rules.Rd:62: unknown macro '\bibcitet'
prepare_Rd: ./man/Weka_classifier_rules.Rd:64: unknown macro '\bibcitet'
prepare_Rd: ./man/Weka_classifier_rules.Rd:67: unknown macro '\bibcitet'
checkRd: (-1) Weka_classifier_rules.Rd:57: Lost braces
57 | by \bibcitet{Cohen:1995}.
| ^
checkRd: (-1) Weka_classifier_rules.Rd:62: Lost braces
62 | See \bibcitet{Holmes+Hall+Frank:1999} for more information.
| ^
checkRd: (-1) Weka_classifier_rules.Rd:64: Lost braces
64 | \code{OneR} builds a simple 1-R classifier, see \bibcitet{Holte:1993}.
| ^
checkRd: (-1) Weka_classifier_rules.Rd:67: Lost braces
67 | \bibcitet{Frank+Witten:1998}.
| ^
prepare_Rd: ./man/Weka_classifier_trees.Rd:69: unknown macro '\bibcitep'
prepare_Rd: ./man/Weka_classifier_trees.Rd:72: unknown macro '\bibcitep'
prepare_Rd: ./man/Weka_classifier_trees.Rd:76: unknown macro '\bibcitet'
prepare_Rd: ./man/Weka_classifier_trees.Rd:77: unknown macro '\bibcitet'
checkRd: (-1) Weka_classifier_trees.Rd:69: Lost braces
69 | \bibcitep{Quinlan:1993}.
| ^
checkRd: (-1) Weka_classifier_trees.Rd:72: Lost braces
72 | \bibcitep{Landwehr:2003, Landwehr+Hall+Frank:2005}.
| ^
checkRd: (-1) Weka_classifier_trees.Rd:76: Lost braces
76 | \bibcitet{Wang+Witten:1997} and enhances the original M5 algorithm by
| ^
checkRd: (-1) Weka_classifier_trees.Rd:77: Lost braces
77 | \bibcitet{Quinlan:1992}.
| ^
prepare_Rd: ./man/Weka_clusterers.Rd:41: unknown macro '\bibcitep'
prepare_Rd: ./man/Weka_clusterers.Rd:42: unknown macro '\bibcitep'
prepare_Rd: ./man/Weka_clusterers.Rd:46: unknown macro '\bibcitet'
prepare_Rd: ./man/Weka_clusterers.Rd:58: unknown macro '\bibcitet'
checkRd: (-1) Weka_clusterers.Rd:41: Lost braces
41 | \code{Cobweb} implements the Cobweb \bibcitep{Fisher:1987} and Classit
| ^
checkRd: (-1) Weka_clusterers.Rd:42: Lost braces
42 | \bibcitep{Gennari+Langley+Fisher:1989} clustering algorithms.
| ^
checkRd: (-1) Weka_clusterers.Rd:46: Lost braces
46 | \bibcitet{Hochbaum+Shmoys:1985},
| ^
checkRd: (-1) Weka_clusterers.Rd:58: Lost braces
58 | by \bibcitet{Ester+Kriegel+Sander:1996}.
| ^
prepare_Rd: ./man/Weka_filters.Rd:38: unknown macro '\bibcitet'
checkRd: (-1) Weka_filters.Rd:38: Lost braces
38 | \bibcitet{Fayyad+Irani:1993}.
| ^
Flavor: r-release-linux-x86_64
Version: 0.4-47
Check: tests
Result: NOTE
Running ‘data_exchange.R’ [1s/0s]
Comparing ‘data_exchange.Rout’ to ‘data_exchange.Rout.save’ ...136c136
< 1 2012-12-12 12:12:12 2012-12-13 01:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
159c159
< 1 2012-12-12 12:12:12 2012-12-13 01:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
Flavor: r-release-macos-arm64
Version: 0.4-46
Check: tests
Result: NOTE
Running ‘data_exchange.R’ [2s/1s]
Comparing ‘data_exchange.Rout’ to ‘data_exchange.Rout.save’ ...136c136
< 1 2012-12-12 12:12:12 2012-12-12 07:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
159c159
< 1 2012-12-12 12:12:12 2012-12-12 07:12:12
---
> 1 2012-12-12 12:12:12 2012-12-12 13:12:12
Flavor: r-release-macos-x86_64
Current CRAN status: NOTE: 3, OK: 11
Version: 3.9.3-2
Check: installed package size
Result: NOTE
installed size is 10.8Mb
sub-directories of 1Mb or more:
java 10.7Mb
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: WARN: 5, NOTE: 1, OK: 8
Version: 0.2-19
Check: Rd files
Result: WARN
prepare_Rd: ./man/skmeans.Rd:53: unknown macro '\bibcitet'
prepare_Rd: ./man/skmeans.Rd:65: unknown macro '\bibcitet'
prepare_Rd: ./man/skmeans.Rd:72: unknown macro '\bibcitet'
prepare_Rd: ./man/skmeans.Rd:75: unknown macro '\bibcitep'
prepare_Rd: ./man/skmeans.Rd:194: unknown macro '\bibcitet'
checkRd: (-1) skmeans.Rd:53: Lost braces
53 | This is the formulation used in \bibcitet{skmeans::Dhillon+Modha:2001}
| ^
checkRd: (-1) skmeans.Rd:65: Lost braces
65 | \bibcitet{skmeans::Krishna+Narasimha_Murty:1999}.}
| ^
checkRd: (-1) skmeans.Rd:72: Lost braces
72 | \bibcitet{skmeans::Dhillon+Guan+Kogan:2002}.}
| ^
checkRd: (-1) skmeans.Rd:75: Lost braces
75 | Karypis \bibcitep{skmeans::Karypis:2002}.}
| ^
checkRd: (-1) skmeans.Rd:194: Lost braces
194 | material to \bibcitet{skmeans::Maitra+Ramler:2010} at
| ^
Flavors: r-release-linux-x86_64, r-release-macos-arm64, r-release-macos-x86_64, r-oldrel-macos-arm64, r-oldrel-macos-x86_64
Version: 0.2-19
Check: package dependencies
Result: NOTE
Package which this enhances but not available for checking: ‘kmndirs’
Flavors: r-oldrel-macos-arm64, r-oldrel-macos-x86_64, r-oldrel-windows-x86_64
Current CRAN status: NOTE: 5, OK: 9
Version: 0.1-55
Check: tests
Result: NOTE
Running ‘abind.R’ [0s/0s]
Comparing ‘abind.Rout’ to ‘abind.Rout.save’ ... OK
Running ‘apply.R’ [0s/0s]
Comparing ‘apply.Rout’ to ‘apply.Rout.save’ ... OK
Running ‘crossprod.R’ [0s/0s]
Comparing ‘crossprod.Rout’ to ‘crossprod.Rout.save’ ... OK
Running ‘dimgets.R’ [0s/0s]
Running ‘extract.R’ [0s/0s]
Comparing ‘extract.Rout’ to ‘extract.Rout.save’ ... OK
Running ‘matrix.R’ [0s/0s]
Comparing ‘matrix.Rout’ to ‘matrix.Rout.save’ ... OK
Running ‘matrix_dimnames.R’ [0s/0s]
Comparing ‘matrix_dimnames.Rout’ to ‘matrix_dimnames.Rout.save’ ... OK
Running ‘rollup.R’ [0s/0s]
Comparing ‘rollup.Rout’ to ‘rollup.Rout.save’ ... OK
Running ‘split.R’ [0s/0s]
Comparing ‘split.Rout’ to ‘split.Rout.save’ ... OK
Running ‘ssa_valid.R’ [0s/0s]
Comparing ‘ssa_valid.Rout’ to ‘ssa_valid.Rout.save’ ... OK
Running ‘stm.R’ [0s/0s]
Comparing ‘stm.Rout’ to ‘stm.Rout.save’ ... OK
Running ‘stm_apply.R’ [0s/0s]
Comparing ‘stm_apply.Rout’ to ‘stm_apply.Rout.save’ ... OK
Running ‘stm_rollup.R’ [0s/0s]
Comparing ‘stm_rollup.Rout’ to ‘stm_rollup.Rout.save’ ...
113a114,115
> _row_tsums: reduced 1 (3) zeros
> _row_tsums: 0.000s [0.000s/0.000s]
Running ‘stm_subassign.R’ [0s/0s]
Comparing ‘stm_subassign.Rout’ to ‘stm_subassign.Rout.save’ ... OK
Running ‘stm_ttcrossprod.R’ [0s/0s]
Comparing ‘stm_ttcrossprod.Rout’ to ‘stm_ttcrossprod.Rout.save’ ... OK
Running ‘stm_valid.R’ [0s/0s]
Comparing ‘stm_valid.Rout’ to ‘stm_valid.Rout.save’ ... OK
Running ‘stm_zeros.R’ [0s/0s]
Comparing ‘stm_zeros.Rout’ to ‘stm_zeros.Rout.save’ ... OK
Running ‘subassign.R’ [0s/0s]
Comparing ‘subassign.Rout’ to ‘subassign.Rout.save’ ... OK
Running ‘util.R’ [0s/0s]
Comparing ‘util.Rout’ to ‘util.Rout.save’ ... OK
Flavor: r-devel-macos-arm64
Version: 0.1-55
Check: tests
Result: NOTE
Running 'abind.R' [0s]
Comparing 'abind.Rout' to 'abind.Rout.save' ... OK
Running 'apply.R' [0s]
Comparing 'apply.Rout' to 'apply.Rout.save' ... OK
Running 'crossprod.R' [0s]
Comparing 'crossprod.Rout' to 'crossprod.Rout.save' ... OK
Running 'dimgets.R' [0s]
Running 'extract.R' [0s]
Comparing 'extract.Rout' to 'extract.Rout.save' ... OK
Running 'matrix.R' [0s]
Comparing 'matrix.Rout' to 'matrix.Rout.save' ... OK
Running 'matrix_dimnames.R' [0s]
Comparing 'matrix_dimnames.Rout' to 'matrix_dimnames.Rout.save' ... OK
Running 'rollup.R' [0s]
Comparing 'rollup.Rout' to 'rollup.Rout.save' ... OK
Running 'split.R' [0s]
Comparing 'split.Rout' to 'split.Rout.save' ... OK
Running 'ssa_valid.R' [0s]
Comparing 'ssa_valid.Rout' to 'ssa_valid.Rout.save' ... OK
Running 'stm.R' [0s]
Comparing 'stm.Rout' to 'stm.Rout.save' ... OK
Running 'stm_apply.R' [0s]
Comparing 'stm_apply.Rout' to 'stm_apply.Rout.save' ... OK
Running 'stm_rollup.R' [0s]
Comparing 'stm_rollup.Rout' to 'stm_rollup.Rout.save' ...
113a114,115
> _row_tsums: reduced 1 (3) zeros
> _row_tsums: 0.000s [0.000s/0.000s]
Running 'stm_subassign.R' [0s]
Comparing 'stm_subassign.Rout' to 'stm_subassign.Rout.save' ... OK
Running 'stm_ttcrossprod.R' [0s]
Comparing 'stm_ttcrossprod.Rout' to 'stm_ttcrossprod.Rout.save' ... OK
Running 'stm_valid.R' [0s]
Comparing 'stm_valid.Rout' to 'stm_valid.Rout.save' ... OK
Running 'stm_zeros.R' [0s]
Comparing 'stm_zeros.Rout' to 'stm_zeros.Rout.save' ... OK
Running 'subassign.R' [0s]
Comparing 'subassign.Rout' to 'subassign.Rout.save' ... OK
Running 'util.R' [0s]
Comparing 'util.Rout' to 'util.Rout.save' ... OK
Flavor: r-devel-windows-x86_64
Version: 0.1-55
Check: tests
Result: NOTE
Running ‘abind.R’ [0s/0s]
Comparing ‘abind.Rout’ to ‘abind.Rout.save’ ... OK
Running ‘apply.R’ [0s/0s]
Comparing ‘apply.Rout’ to ‘apply.Rout.save’ ... OK
Running ‘crossprod.R’ [0s/0s]
Comparing ‘crossprod.Rout’ to ‘crossprod.Rout.save’ ... OK
Running ‘dimgets.R’ [0s/0s]
Running ‘extract.R’ [0s/0s]
Comparing ‘extract.Rout’ to ‘extract.Rout.save’ ... OK
Running ‘matrix.R’ [0s/0s]
Comparing ‘matrix.Rout’ to ‘matrix.Rout.save’ ... OK
Running ‘matrix_dimnames.R’ [0s/0s]
Comparing ‘matrix_dimnames.Rout’ to ‘matrix_dimnames.Rout.save’ ... OK
Running ‘rollup.R’ [0s/0s]
Comparing ‘rollup.Rout’ to ‘rollup.Rout.save’ ... OK
Running ‘split.R’ [0s/0s]
Comparing ‘split.Rout’ to ‘split.Rout.save’ ... OK
Running ‘ssa_valid.R’ [0s/0s]
Comparing ‘ssa_valid.Rout’ to ‘ssa_valid.Rout.save’ ... OK
Running ‘stm.R’ [0s/0s]
Comparing ‘stm.Rout’ to ‘stm.Rout.save’ ... OK
Running ‘stm_apply.R’ [0s/0s]
Comparing ‘stm_apply.Rout’ to ‘stm_apply.Rout.save’ ... OK
Running ‘stm_rollup.R’ [0s/0s]
Comparing ‘stm_rollup.Rout’ to ‘stm_rollup.Rout.save’ ...113a114,115
> _row_tsums: reduced 1 (3) zeros
> _row_tsums: 0.000s [0.000s/0.000s]
Running ‘stm_subassign.R’ [0s/0s]
Comparing ‘stm_subassign.Rout’ to ‘stm_subassign.Rout.save’ ... OK
Running ‘stm_ttcrossprod.R’ [0s/0s]
Comparing ‘stm_ttcrossprod.Rout’ to ‘stm_ttcrossprod.Rout.save’ ... OK
Running ‘stm_valid.R’ [0s/0s]
Comparing ‘stm_valid.Rout’ to ‘stm_valid.Rout.save’ ... OK
Running ‘stm_zeros.R’ [0s/0s]
Comparing ‘stm_zeros.Rout’ to ‘stm_zeros.Rout.save’ ... OK
Running ‘subassign.R’ [0s/0s]
Comparing ‘subassign.Rout’ to ‘subassign.Rout.save’ ... OK
Running ‘util.R’ [0s/0s]
Comparing ‘util.Rout’ to ‘util.Rout.save’ ... OK
Flavor: r-release-macos-arm64
Version: 0.1-55
Check: tests
Result: NOTE
Running ‘abind.R’ [0s/0s]
Comparing ‘abind.Rout’ to ‘abind.Rout.save’ ... OK
Running ‘apply.R’ [0s/0s]
Comparing ‘apply.Rout’ to ‘apply.Rout.save’ ... OK
Running ‘crossprod.R’ [0s/0s]
Comparing ‘crossprod.Rout’ to ‘crossprod.Rout.save’ ... OK
Running ‘dimgets.R’ [0s/0s]
Running ‘extract.R’ [0s/0s]
Comparing ‘extract.Rout’ to ‘extract.Rout.save’ ... OK
Running ‘matrix.R’ [0s/1s]
Comparing ‘matrix.Rout’ to ‘matrix.Rout.save’ ... OK
Running ‘matrix_dimnames.R’ [0s/0s]
Comparing ‘matrix_dimnames.Rout’ to ‘matrix_dimnames.Rout.save’ ... OK
Running ‘rollup.R’ [0s/0s]
Comparing ‘rollup.Rout’ to ‘rollup.Rout.save’ ... OK
Running ‘split.R’ [0s/0s]
Comparing ‘split.Rout’ to ‘split.Rout.save’ ... OK
Running ‘ssa_valid.R’ [0s/0s]
Comparing ‘ssa_valid.Rout’ to ‘ssa_valid.Rout.save’ ... OK
Running ‘stm.R’ [0s/0s]
Comparing ‘stm.Rout’ to ‘stm.Rout.save’ ... OK
Running ‘stm_apply.R’ [0s/0s]
Comparing ‘stm_apply.Rout’ to ‘stm_apply.Rout.save’ ... OK
Running ‘stm_rollup.R’ [0s/0s]
Comparing ‘stm_rollup.Rout’ to ‘stm_rollup.Rout.save’ ...113a114,115
> _row_tsums: reduced 1 (3) zeros
> _row_tsums: 0.000s [0.000s/0.000s]
Running ‘stm_subassign.R’ [0s/1s]
Comparing ‘stm_subassign.Rout’ to ‘stm_subassign.Rout.save’ ... OK
Running ‘stm_ttcrossprod.R’ [0s/1s]
Comparing ‘stm_ttcrossprod.Rout’ to ‘stm_ttcrossprod.Rout.save’ ... OK
Running ‘stm_valid.R’ [0s/1s]
Comparing ‘stm_valid.Rout’ to ‘stm_valid.Rout.save’ ... OK
Running ‘stm_zeros.R’ [0s/1s]
Comparing ‘stm_zeros.Rout’ to ‘stm_zeros.Rout.save’ ... OK
Running ‘subassign.R’ [0s/1s]
Comparing ‘subassign.Rout’ to ‘subassign.Rout.save’ ... OK
Running ‘util.R’ [0s/1s]
Comparing ‘util.Rout’ to ‘util.Rout.save’ ... OK
Flavor: r-release-macos-x86_64
Version: 0.1-55
Check: tests
Result: NOTE
Running 'abind.R' [0s]
Comparing 'abind.Rout' to 'abind.Rout.save' ... OK
Running 'apply.R' [0s]
Comparing 'apply.Rout' to 'apply.Rout.save' ... OK
Running 'crossprod.R' [0s]
Comparing 'crossprod.Rout' to 'crossprod.Rout.save' ... OK
Running 'dimgets.R' [0s]
Running 'extract.R' [0s]
Comparing 'extract.Rout' to 'extract.Rout.save' ... OK
Running 'matrix.R' [0s]
Comparing 'matrix.Rout' to 'matrix.Rout.save' ... OK
Running 'matrix_dimnames.R' [0s]
Comparing 'matrix_dimnames.Rout' to 'matrix_dimnames.Rout.save' ... OK
Running 'rollup.R' [0s]
Comparing 'rollup.Rout' to 'rollup.Rout.save' ... OK
Running 'split.R' [0s]
Comparing 'split.Rout' to 'split.Rout.save' ... OK
Running 'ssa_valid.R' [0s]
Comparing 'ssa_valid.Rout' to 'ssa_valid.Rout.save' ... OK
Running 'stm.R' [0s]
Comparing 'stm.Rout' to 'stm.Rout.save' ... OK
Running 'stm_apply.R' [0s]
Comparing 'stm_apply.Rout' to 'stm_apply.Rout.save' ... OK
Running 'stm_rollup.R' [0s]
Comparing 'stm_rollup.Rout' to 'stm_rollup.Rout.save' ...113a114,115
> _row_tsums: reduced 1 (3) zeros
> _row_tsums: 0.000s [0.000s/0.000s]
Running 'stm_subassign.R' [0s]
Comparing 'stm_subassign.Rout' to 'stm_subassign.Rout.save' ... OK
Running 'stm_ttcrossprod.R' [0s]
Comparing 'stm_ttcrossprod.Rout' to 'stm_ttcrossprod.Rout.save' ... OK
Running 'stm_valid.R' [0s]
Comparing 'stm_valid.Rout' to 'stm_valid.Rout.save' ... OK
Running 'stm_zeros.R' [0s]
Comparing 'stm_zeros.Rout' to 'stm_zeros.Rout.save' ... OK
Running 'subassign.R' [0s]
Comparing 'subassign.Rout' to 'subassign.Rout.save' ... OK
Running 'util.R' [0s]
Comparing 'util.Rout' to 'util.Rout.save' ... OK
Flavor: r-release-windows-x86_64
Current CRAN status: WARN: 1, NOTE: 5, OK: 8
Version: 0.0-27
Check: tests
Result: NOTE
Running ‘counting.R’ [0s/0s]
Comparing ‘counting.Rout’ to ‘counting.Rout.save’ ...
26a27,28
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
47a50
> counting ... 9 string(s) using 19 nodes [0.00s]
49a53,54
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
70a76,77
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
77a85,86
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 4 strings [0.00s]
86a96,97
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
96a108,109
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
106a120
> counting ... 2 string(s) using 5 nodes [0.00s]
108a123,124
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Running ‘counting_useBytes.R’ [0s/0s]
Comparing ‘counting_useBytes.Rout’ to ‘counting_useBytes.Rout.save’ ...
32a33,34
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
56a59
> counting ... 10 string(s) using 19 nodes [0.00s]
58a62,63
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
82a88,89
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
89a97,98
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 5 strings [0.00s]
99a109,110
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
110a122,123
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
121a135
> counting ... 2 string(s) using 5 nodes [0.00s]
123a138,139
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Flavor: r-devel-macos-arm64
Version: 0.0-27
Check: tests
Result: NOTE
Running 'counting.R' [0s]
Comparing 'counting.Rout' to 'counting.Rout.save' ...
26a27,28
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
47a50
> counting ... 9 string(s) using 19 nodes [0.00s]
49a53,54
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
70a76,77
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
77a85,86
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 4 strings [0.00s]
86a96,97
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
96a108,109
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
106a120
> counting ... 2 string(s) using 5 nodes [0.00s]
108a123,124
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Running 'counting_useBytes.R' [0s]
Comparing 'counting_useBytes.Rout' to 'counting_useBytes.Rout.save' ...
32a33,34
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
56a59
> counting ... 10 string(s) using 19 nodes [0.00s]
58a62,63
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
82a88,89
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
89a97,98
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 5 strings [0.00s]
99a109,110
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
110a122,123
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
121a135
> counting ... 2 string(s) using 5 nodes [0.00s]
123a138,139
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Flavor: r-devel-windows-x86_64
Version: 0.0-27
Check: Rd files
Result: WARN
prepare_Rd: ./man/textcnt.Rd:60: unknown macro '\bibcitet'
checkRd: (-1) textcnt.Rd:60: Lost braces
60 | \bibcitet{tau::Cavnar+Trenkle:1994}.
| ^
Flavor: r-release-linux-x86_64
Version: 0.0-27
Check: tests
Result: NOTE
Running ‘counting.R’ [0s/0s]
Comparing ‘counting.Rout’ to ‘counting.Rout.save’ ...26a27,28
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
47a50
> counting ... 9 string(s) using 19 nodes [0.00s]
49a53,54
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
70a76,77
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
77a85,86
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 4 strings [0.00s]
86a96,97
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
96a108,109
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
106a120
> counting ... 2 string(s) using 5 nodes [0.00s]
108a123,124
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Running ‘counting_useBytes.R’ [0s/0s]
Comparing ‘counting_useBytes.Rout’ to ‘counting_useBytes.Rout.save’ ...32a33,34
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
56a59
> counting ... 10 string(s) using 19 nodes [0.00s]
58a62,63
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
82a88,89
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
89a97,98
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 5 strings [0.00s]
99a109,110
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
110a122,123
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
121a135
> counting ... 2 string(s) using 5 nodes [0.00s]
123a138,139
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Flavor: r-release-macos-arm64
Version: 0.0-26
Check: tests
Result: NOTE
Running ‘counting.R’ [0s/0s]
Comparing ‘counting.Rout’ to ‘counting.Rout.save’ ...26a27,28
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
47a50
> counting ... 9 string(s) using 19 nodes [0.00s]
49a53,54
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
70a76,77
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
77a85,86
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 4 strings [0.00s]
86a96,97
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
96a108,109
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
106a120
> counting ... 2 string(s) using 5 nodes [0.00s]
108a123,124
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Running ‘counting_useBytes.R’ [0s/0s]
Comparing ‘counting_useBytes.Rout’ to ‘counting_useBytes.Rout.save’ ...32a33,34
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
56a59
> counting ... 10 string(s) using 19 nodes [0.00s]
58a62,63
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
82a88,89
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
89a97,98
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 5 strings [0.00s]
99a109,110
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
110a122,123
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
121a135
> counting ... 2 string(s) using 5 nodes [0.00s]
123a138,139
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Flavor: r-release-macos-x86_64
Version: 0.0-27
Check: tests
Result: NOTE
Running 'counting.R' [0s]
Comparing 'counting.Rout' to 'counting.Rout.save' ...26a27,28
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
47a50
> counting ... 9 string(s) using 19 nodes [0.00s]
49a53,54
> counting ... 9 string(s) using 19 nodes [0.00s]
> writing ... 16 strings [0.00s]
70a76,77
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
77a85,86
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 4 strings [0.00s]
86a96,97
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
96a108,109
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 5 strings [0.00s]
106a120
> counting ... 2 string(s) using 5 nodes [0.00s]
108a123,124
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Running 'counting_useBytes.R' [0s]
Comparing 'counting_useBytes.Rout' to 'counting_useBytes.Rout.save' ...32a33,34
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
56a59
> counting ... 10 string(s) using 19 nodes [0.00s]
58a62,63
> counting ... 10 string(s) using 19 nodes [0.00s]
> writing ... 19 strings [0.00s]
82a88,89
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
89a97,98
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 5 strings [0.00s]
99a109,110
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
110a122,123
> counting ... 2 string(s) using 6 nodes [0.00s]
> writing ... 6 strings [0.00s]
121a135
> counting ... 2 string(s) using 5 nodes [0.00s]
123a138,139
> counting ... 2 string(s) using 5 nodes [0.00s]
> writing ... 2 strings [0.00s]
Flavor: r-release-windows-x86_64
Current CRAN status: OK: 14
Current CRAN status: ERROR: 3, WARN: 1, NOTE: 2, OK: 8
Version: 0.7-18
Check: Rd files
Result: WARN
acq.Rd:22: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
crude.Rd:22: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
readRCV1.Rd:28: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
readReut21578XML.Rd:31: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
stemCompletion.Rd:39: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
weightSMART.Rd:75: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
weightTfIdf.Rd:38: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
problems found in ‘acq.Rd’, ‘crude.Rd’, ‘readRCV1.Rd’, ‘readReut21578XML.Rd’, ‘stemCompletion.Rd’, ‘weightSMART.Rd’, ‘weightTfIdf.Rd’
Flavors: r-devel-macos-arm64, r-devel-windows-x86_64
Version: 0.7-18
Check: examples
Result: ERROR
Running examples in ‘tm-Ex.R’ failed
The error most likely occurred in:
> ### Name: readPDF
> ### Title: Read In a PDF Document
> ### Aliases: readPDF
> ### Keywords: file
>
> ### ** Examples
>
> uri <- paste0("file://",
+ system.file(file.path("doc", "tm.pdf"), package = "tm"))
> engine <- if(nzchar(system.file(package = "pdftools"))) {
+ "pdftools"
+ } else {
+ "ghostscript"
+ }
> reader <- readPDF(engine)
> pdf <- reader(elem = list(uri = uri), language = "en", id = "id1")
> cat(content(pdf)[1])
Introduction to the tm Package
Text Mining in R
Ingo Feinerer
February 18, 2026
Introduction
This vignette gives a short introduction to text mining in R utilizing the text mining framework provided by
the tm package. We present methods for data import, corpus handling, preprocessing, metadata management,
and creation of term-document matrices. Our focus is on the main aspects of getting started with text mining
in R—an in-depth description of the text mining infrastructure offered by tm was published in the Journal of
Statistical Software (Feinerer et al., 2008). An introductory article on text mining in R was published in R
News (Feinerer, 2008).
Data Import
The main structure for managing documents in tm is a so-called Corpus, representing a collection of text
documents. A corpus is an abstract concept, and there can exist several implementations in parallel. The
default implementation is the so-called VCorpus (short for Volatile Corpus) which realizes a semantics as known
from most R objects: corpora are R objects held fully in memory. We denote this as volatile since once the
R object is destroyed, the whole corpus is gone. Such a volatile corpus can be created via the constructor
VCorpus(x, readerControl). Another implementation is the PCorpus which implements a Permanent Corpus
semantics, i.e., the documents are physically stored outside of R (e.g., in a database), corresponding R objects
are basically only pointers to external structures, and changes to the underlying corpus are reflected to all R
objects associated with it. Compared to the volatile corpus the corpus encapsulated by a permanent corpus
object is not destroyed if the corresponding R object is released.
Within the corpus constructor, x must be a Source object which abstracts the input location. tm provides a
set of predefined sources, e.g., DirSource, VectorSource, or DataframeSource, which handle a directory, a vector
interpreting each component as document, or data frame like structures (like CSV files), respectively. Except
DirSource, which is designed solely for directories on a file system, and VectorSource, which only accepts (char-
acter) vectors, most other implemented sources can take connections as input (a character string is interpreted
as file path). getSources() lists available sources, and users can create their own sources.
The second argument readerControl of the corpus constructor has to be a list with the named components
reader and language. The first component reader constructs a text document from elements delivered by
a source. The tm package ships with several readers (e.g., readPlain(), readPDF(), readDOC(), . . . ). See
getReaders() for an up-to-date list of available readers. Each source has a default reader which can be
overridden. E.g., for DirSource the default just reads in the input files and interprets their content as text.
Finally, the second component language sets the texts’ language (preferably using ISO 639-2 codes).
In case of a permanent corpus, a third argument dbControl has to be a list with the named components
dbName giving the filename holding the sourced out objects (i.e., the database), and dbType holding a valid
database type as supported by package filehash. Activated database support reduces the memory demand,
however, access gets slower since each operation is limited by the hard disk’s read and write capabilities.
So e.g., plain text files in the directory txt containing Latin (lat) texts by the Roman poet Ovid can be
read in with following code:
> txt <- system.file("texts", "txt", package = "tm")
> (ovid <- VCorpus(DirSource(txt, encoding = "UTF-8"),
+ readerControl = list(language = "lat")))
<<VCorpus>>
Metadata: corpus specific: 0, document level (indexed): 0
Content: documents: 5
1
> VCorpus(URISource(uri, mode = ""),
+ readerControl = list(reader = readPDF(engine = "ghostscript")))
sh: : command not found
Error in `<current-expression>` : error in running command
Calls: VCorpus ... mapply -> <Anonymous> -> <Anonymous> -> pdf_info -> system2
Execution halted
Flavors: r-devel-macos-arm64, r-release-macos-arm64
Version: 0.7-18
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'Rcampdf', 'tm.lexicon.GeneralInquirer'
Flavors: r-oldrel-macos-arm64, r-oldrel-windows-x86_64
Version: 0.7-18
Check: examples
Result: ERROR
Running examples in ‘tm-Ex.R’ failed
The error most likely occurred in:
> ### Name: readPDF
> ### Title: Read In a PDF Document
> ### Aliases: readPDF
> ### Keywords: file
>
> ### ** Examples
>
> uri <- paste0("file://",
+ system.file(file.path("doc", "tm.pdf"), package = "tm"))
> engine <- if(nzchar(system.file(package = "pdftools"))) {
+ "pdftools"
+ } else {
+ "ghostscript"
+ }
> reader <- readPDF(engine)
> pdf <- reader(elem = list(uri = uri), language = "en", id = "id1")
> cat(content(pdf)[1])
Introduction to the tm Package
Text Mining in R
Ingo Feinerer
February 18, 2026
Introduction
This vignette gives a short introduction to text mining in R utilizing the text mining framework provided by
the tm package. We present methods for data import, corpus handling, preprocessing, metadata management,
and creation of term-document matrices. Our focus is on the main aspects of getting started with text mining
in R—an in-depth description of the text mining infrastructure offered by tm was published in the Journal of
Statistical Software (Feinerer et al., 2008). An introductory article on text mining in R was published in R
News (Feinerer, 2008).
Data Import
The main structure for managing documents in tm is a so-called Corpus, representing a collection of text
documents. A corpus is an abstract concept, and there can exist several implementations in parallel. The
default implementation is the so-called VCorpus (short for Volatile Corpus) which realizes a semantics as known
from most R objects: corpora are R objects held fully in memory. We denote this as volatile since once the
R object is destroyed, the whole corpus is gone. Such a volatile corpus can be created via the constructor
VCorpus(x, readerControl). Another implementation is the PCorpus which implements a Permanent Corpus
semantics, i.e., the documents are physically stored outside of R (e.g., in a database), corresponding R objects
are basically only pointers to external structures, and changes to the underlying corpus are reflected to all R
objects associated with it. Compared to the volatile corpus the corpus encapsulated by a permanent corpus
object is not destroyed if the corresponding R object is released.
Within the corpus constructor, x must be a Source object which abstracts the input location. tm provides a
set of predefined sources, e.g., DirSource, VectorSource, or DataframeSource, which handle a directory, a vector
interpreting each component as document, or data frame like structures (like CSV files), respectively. Except
DirSource, which is designed solely for directories on a file system, and VectorSource, which only accepts (char-
acter) vectors, most other implemented sources can take connections as input (a character string is interpreted
as file path). getSources() lists available sources, and users can create their own sources.
The second argument readerControl of the corpus constructor has to be a list with the named components
reader and language. The first component reader constructs a text document from elements delivered by
a source. The tm package ships with several readers (e.g., readPlain(), readPDF(), readDOC(), . . . ). See
getReaders() for an up-to-date list of available readers. Each source has a default reader which can be
overridden. E.g., for DirSource the default just reads in the input files and interprets their content as text.
Finally, the second component language sets the texts’ language (preferably using ISO 639-2 codes).
In case of a permanent corpus, a third argument dbControl has to be a list with the named components
dbName giving the filename holding the sourced out objects (i.e., the database), and dbType holding a valid
database type as supported by package filehash. Activated database support reduces the memory demand,
however, access gets slower since each operation is limited by the hard disk’s read and write capabilities.
So e.g., plain text files in the directory txt containing Latin (lat) texts by the Roman poet Ovid can be
read in with following code:
> txt <- system.file("texts", "txt", package = "tm")
> (ovid <- VCorpus(DirSource(txt, encoding = "UTF-8"),
+ readerControl = list(language = "lat")))
<<VCorpus>>
Metadata: corpus specific: 0, document level (indexed): 0
Content: documents: 5
1
> VCorpus(URISource(uri, mode = ""),
+ readerControl = list(reader = readPDF(engine = "ghostscript")))
sh: : command not found
Error in system2(gs_cmd, c("-dNODISPLAY -q", sprintf("-sFile=%s", shQuote(file)), :
error in running command
Calls: VCorpus ... mapply -> <Anonymous> -> <Anonymous> -> pdf_info -> system2
Execution halted
Flavor: r-oldrel-macos-arm64
Version: 0.7-17
Check: package dependencies
Result: NOTE
Packages suggested but not available for checking:
'Rcampdf', 'tm.lexicon.GeneralInquirer'
Flavor: r-oldrel-macos-x86_64
Current CRAN status: OK: 14
Current CRAN status: WARN: 3, NOTE: 2, OK: 9
Version: 0.10-60
Check: dependencies in R code
Result: NOTE
Namespace in Imports field not imported from: ‘jsonlite’
All declared Imports should be used.
Flavors: r-devel-linux-x86_64-fedora-clang, r-devel-linux-x86_64-fedora-gcc
Version: 0.10-60
Check: Rd files
Result: WARN
NelPlo.Rd:42: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
USeconomic.Rd:11: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
adf.test.Rd:29: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
arma.Rd:24: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
bds.test.Rd:48: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
bev.Rd:21: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
garch.Rd:51: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
ice.river.Rd:12: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
jarque.bera.test.Rd:31: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
kpss.test.Rd:24: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
po.test.Rd:28: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
portfolio.optim.Rd:55: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
pp.test.Rd:31: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
runs.test.Rd:41: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
summary.garch.Rd:24: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
surrogate.Rd:39: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
terasvirta.test.Rd:50: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
tsbootstrap.Rd:35: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
white.test.Rd:59: processing build-stage \Sexpr code failed:
Error in gzfile(file, "rb"): cannot open the connection
problems found in ‘NelPlo.Rd’, ‘USeconomic.Rd’, ‘adf.test.Rd’, ‘arma.Rd’, ‘bds.test.Rd’, ‘bev.Rd’, ‘garch.Rd’, ‘ice.river.Rd’, ‘jarque.bera.test.Rd’, ‘kpss.test.Rd’, ‘po.test.Rd’, ‘portfolio.optim.Rd’, ‘pp.test.Rd’, ‘runs.test.Rd’, ‘summary.garch.Rd’, ‘surrogate.Rd’, ‘terasvirta.test.Rd’, ‘tsbootstrap.Rd’, ‘white.test.Rd’
Flavors: r-devel-macos-arm64, r-devel-windows-x86_64
Version: 0.10-60
Check: Rd files
Result: WARN
prepare_Rd: ./man/USeconomic.Rd:11: unknown macro '\bibcitet'
checkRd: (-1) USeconomic.Rd:11: Lost braces
11 | This is the E.3 example data set of \bibcitet{R:Luetkepohl:1991}.
| ^
prepare_Rd: ./man/adf.test.Rd:29: unknown macro '\bibcitet'
checkRd: (-1) adf.test.Rd:29: Lost braces
29 | of \bibcitet{R:Banerjee+Dolado+Galbraith:1993}.
| ^
prepare_Rd: ./man/arma.Rd:24: unknown macro '\bibcitet'
prepare_Rd: ./man/arma.Rd:49: unknown macro '\bibcitet'
checkRd: (-1) arma.Rd:24: Lost braces
24 | \bibcitet{Hannan+Rissanen:1982} is used for the default initialization.}
| ^
checkRd: (-1) arma.Rd:49: Lost braces
49 | See \bibcitet{Hannan+Rissanen:1982} for details.
| ^
prepare_Rd: ./man/bds.test.Rd:47: unknown macro '\bibinfo'
checkRd: (-1) bds.test.Rd:47: Lost braces
47 | \bibinfo{Cromwell+Labys+Terraza:1994}{note}{Pages 32--36}
| ^
checkRd: (-1) bds.test.Rd:47: Lost braces
47 | \bibinfo{Cromwell+Labys+Terraza:1994}{note}{Pages 32--36}
| ^
checkRd: (-1) bds.test.Rd:47: Lost braces
47 | \bibinfo{Cromwell+Labys+Terraza:1994}{note}{Pages 32--36}
| ^
prepare_Rd: ./man/bev.Rd:21: unknown macro '\bibcitet'
checkRd: (-1) bev.Rd:21: Lost braces
21 | overdifferenced. See, e.g., \bibcitet{Baillie:1996}.
| ^
prepare_Rd: ./man/garch.Rd:51: unknown macro '\bibcitet'
prepare_Rd: ./man/garch.Rd:52: unknown macro '\bibcitet'
prepare_Rd: ./man/garch.Rd:53: unknown macro '\bibcitet'
prepare_Rd: ./man/garch.Rd:54: unknown macro '\bibcitet'
checkRd: (-1) garch.Rd:51: Lost braces
51 | \bibcitet{Dennis+Gay+Welsch:1981},
| ^
checkRd: (-1) garch.Rd:52: Lost braces
52 | \bibcitet{Dennis+Mei:1979},
| ^
checkRd: (-1) garch.Rd:53: Lost braces
53 | \bibcitet{Dennis+Moré:1977} and
| ^
checkRd: (-1) garch.Rd:54: Lost braces
54 | \bibcitet{Goldfarb:1976}.
| ^
prepare_Rd: ./man/ice.river.Rd:12: unknown macro '\bibcitet'
prepare_Rd: ./man/ice.river.Rd:30: unknown macro '\bibcitet'
checkRd: (-1) ice.river.Rd:12: Lost braces
12 | \bibcitet{|Tong:1990|pages 432--440}.
| ^
checkRd: (-1) ice.river.Rd:30: Lost braces
30 | \bibcitet{Tong+Thanoon+Gudmundsson:1985}.
| ^
prepare_Rd: ./man/jarque.bera.test.Rd:30: unknown macro '\bibinfo'
checkRd: (-1) jarque.bera.test.Rd:30: Lost braces
30 | \bibinfo{Cromwell+Labys+Terraza:1994}{note}{Pages 20--22}
| ^
checkRd: (-1) jarque.bera.test.Rd:30: Lost braces
30 | \bibinfo{Cromwell+Labys+Terraza:1994}{note}{Pages 20--22}
| ^
checkRd: (-1) jarque.bera.test.Rd:30: Lost braces
30 | \bibinfo{Cromwell+Labys+Terraza:1994}{note}{Pages 20--22}
| ^
prepare_Rd: ./man/kpss.test.Rd:24: unknown macro '\bibcitet'
checkRd: (-1) kpss.test.Rd:24: Lost braces
24 | from Table 1 of \bibcitet{Kwiatkowski+Phillips+Schmidt:1992}.
| ^
prepare_Rd: ./man/po.test.Rd:28: unknown macro '\bibcitet'
checkRd: (-1) po.test.Rd:28: Lost braces
28 | \bibcitet{Phillips+Ouliaris:1990}.
| ^
prepare_Rd: ./man/portfolio.optim.Rd:53: unknown macro '\bibinfo'
prepare_Rd: ./man/portfolio.optim.Rd:54: unknown macro '\bibinfo'
checkRd: (-1) portfolio.optim.Rd:53: Lost braces
53 | \bibinfo{Elton+Gruber:1991}{note}{Pages 65--93}
| ^
checkRd: (-1) portfolio.optim.Rd:53: Lost braces
53 | \bibinfo{Elton+Gruber:1991}{note}{Pages 65--93}
| ^
checkRd: (-1) portfolio.optim.Rd:53: Lost braces
53 | \bibinfo{Elton+Gruber:1991}{note}{Pages 65--93}
| ^
checkRd: (-1) portfolio.optim.Rd:54: Lost braces
54 | \bibinfo{Huang+Litzenberger:1988}{note}{Pages 59--82}
| ^
checkRd: (-1) portfolio.optim.Rd:54: Lost braces
54 | \bibinfo{Huang+Litzenberger:1988}{note}{Pages 59--82}
| ^
checkRd: (-1) portfolio.optim.Rd:54: Lost braces
54 | \bibinfo{Huang+Litzenberger:1988}{note}{Pages 59--82}
| ^
prepare_Rd: ./man/pp.test.Rd:31: unknown macro '\bibcitet'
checkRd: (-1) pp.test.Rd:31: Lost braces
31 | \bibcitet{R:Banerjee+Dolado+Galbraith:1993}. If the
| ^
prepare_Rd: ./man/summary.garch.Rd:24: unknown macro '\bibcitet'
checkRd: (-1) summary.garch.Rd:24: Lost braces
24 | Hessian evaluated at the estimates, see \bibcitet{Bollerslev:1986}.
| ^
prepare_Rd: ./man/surrogate.Rd:39: unknown macro '\bibcitet'
checkRd: (-1) surrogate.Rd:39: Lost braces
39 | \bibcitet{|Theiler+Galdrikian+Longtin:1992|pages 183--184} are
| ^
prepare_Rd: ./man/tsbootstrap.Rd:35: unknown macro '\bibcitet'
prepare_Rd: ./man/tsbootstrap.Rd:38: unknown macro '\bibcitet'
prepare_Rd: ./man/tsbootstrap.Rd:41: unknown macro '\bibcitep'
checkRd: (-1) tsbootstrap.Rd:35: Lost braces
35 | \bibcitet{Politis+Romano:1994}
| ^
checkRd: (-1) tsbootstrap.Rd:38: Lost braces
38 | \bibcitet{Kunsch:1989} is used.
| ^
checkRd: (-1) tsbootstrap.Rd:41: Lost braces
41 | \bibcitep{see|Kunsch:1989|}.
| ^
Flavor: r-release-linux-x86_64
Current CRAN status: OK: 14
Current CRAN status: OK: 14
Current CRAN status: NOTE: 3, OK: 11
Version: 0.1-18
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘wordnetDicts’
Flavors: r-oldrel-macos-arm64, r-oldrel-windows-x86_64
Version: 0.1-17
Check: package dependencies
Result: NOTE
Package suggested but not available for checking: ‘wordnetDicts’
Flavor: r-oldrel-macos-x86_64