Multi-generational pedigree inference from incomplete data on hundreds of SNPs, including parentage assignment and sibship clustering. See Huisman (2017) (<doi:10.1111/1755-0998.12665>) for more information.
| Version: | 3.0.3 |
| Depends: | R (≥ 3.5.0) |
| Imports: | plyr (≥ 1.8.0), stats, utils, graphics, cli |
| Suggests: | openxlsx, knitr, rmarkdown, bookdown, kinship2, R.rsp, hexbin, data.table, vcfR, adegenet |
| Published: | 2025-08-19 |
| DOI: | 10.32614/CRAN.package.sequoia |
| Author: | Jisca Huisman [aut, cre] |
| Maintainer: | Jisca Huisman <jisca.huisman at gmail.com> |
| License: | GPL-2 |
| URL: | https://jiscah.github.io/ |
| NeedsCompilation: | yes |
| SystemRequirements: | Fortran95 |
| Citation: | sequoia citation info |
| Materials: | NEWS |
| CRAN checks: | sequoia results |
| Reference manual: | sequoia.html , sequoia.pdf |
| Vignettes: |
PedCompare Example (Griffin Pedigree) (source, R code) Quick start example 1: Simulated data (source, R code) Sequoia - Age 'Prior' (source, R code) Sequoia User Guide (source, R code) Sequoia flowchart (source) Mitochondrial haplotypes (source) |
| Package source: | sequoia_3.0.3.tar.gz |
| Windows binaries: | r-devel: sequoia_3.0.3.zip, r-release: sequoia_3.0.3.zip, r-oldrel: sequoia_3.0.3.zip |
| macOS binaries: | r-release (arm64): sequoia_3.0.3.tgz, r-oldrel (arm64): sequoia_3.0.3.tgz, r-release (x86_64): sequoia_3.0.3.tgz, r-oldrel (x86_64): sequoia_3.0.3.tgz |
| Old sources: | sequoia archive |
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